\\n\\n
Released this past November, the list is based on data collected from the Web of Science and highlights some of the world’s most influential scientific minds by naming the researchers whose publications over the previous decade have included a high number of Highly Cited Papers placing them among the top 1% most-cited.
\\n\\nWe wish to congratulate all of the researchers named and especially our authors on this amazing accomplishment! We are happy and proud to share in their success!
Note: Edited in March 2021
\\n"}]',published:!0,mainMedia:{caption:"Highly Cited",originalUrl:"/media/original/117"}},components:[{type:"htmlEditorComponent",content:'IntechOpen is proud to announce that 191 of our authors have made the Clarivate™ Highly Cited Researchers List for 2020, ranking them among the top 1% most-cited.
\n\nThroughout the years, the list has named a total of 261 IntechOpen authors as Highly Cited. Of those researchers, 69 have been featured on the list multiple times.
\n\n\n\nReleased this past November, the list is based on data collected from the Web of Science and highlights some of the world’s most influential scientific minds by naming the researchers whose publications over the previous decade have included a high number of Highly Cited Papers placing them among the top 1% most-cited.
\n\nWe wish to congratulate all of the researchers named and especially our authors on this amazing accomplishment! We are happy and proud to share in their success!
Note: Edited in March 2021
\n'}],latestNews:[{slug:"webinar-introduction-to-open-science-wednesday-18-may-1-pm-cest-20220518",title:"Webinar: Introduction to Open Science | Wednesday 18 May, 1 PM CEST"},{slug:"step-in-the-right-direction-intechopen-launches-a-portfolio-of-open-science-journals-20220414",title:"Step in the Right Direction: IntechOpen Launches a Portfolio of Open Science Journals"},{slug:"let-s-meet-at-london-book-fair-5-7-april-2022-olympia-london-20220321",title:"Let’s meet at London Book Fair, 5-7 April 2022, Olympia London"},{slug:"50-books-published-as-part-of-intechopen-and-knowledge-unlatched-ku-collaboration-20220316",title:"50 Books published as part of IntechOpen and Knowledge Unlatched (KU) Collaboration"},{slug:"intechopen-joins-the-united-nations-sustainable-development-goals-publishers-compact-20221702",title:"IntechOpen joins the United Nations Sustainable Development Goals Publishers Compact"},{slug:"intechopen-signs-exclusive-representation-agreement-with-lsr-libros-servicios-y-representaciones-s-a-de-c-v-20211123",title:"IntechOpen Signs Exclusive Representation Agreement with LSR Libros Servicios y Representaciones S.A. de C.V"},{slug:"intechopen-expands-partnership-with-research4life-20211110",title:"IntechOpen Expands Partnership with Research4Life"},{slug:"introducing-intechopen-book-series-a-new-publishing-format-for-oa-books-20210915",title:"Introducing IntechOpen Book Series - A New Publishing Format for OA Books"}]},book:{item:{type:"book",id:"5089",leadTitle:null,fullTitle:"Recent Advances in Biopolymers",title:"Recent Advances in Biopolymers",subtitle:null,reviewType:"peer-reviewed",abstract:"This book contains 10 Chapters divided into three Sections. Section A covers synthesis of biopolymers. Lignocellulosic feedstock contains cellulose, hemicellulose, and lignin, which are used for synthesis of biopolymers. Polymer-coated noble metal nanoparticles are used in nanobiomedicine and fundamental biomaterials. Section B describes applications of biopolymers in biomedical, antimicrobial, industrial, nanotechnology, laser-based thin films, and regenerative medicines. Section C is dedicated for advancement and engineering in biopolymers for personal protective garments, equipments, membrane separation processes, purifications, and new generation of high-performance biomaterials. A new numerical-cum-graphical method called TI2BioP (Topological Indices to BioPolymers) has been developed to estimate topological indices (TIs) from two-dimensional (2D) graphical approaches for the natural biopolymers DNA, RNA, and proteins.",isbn:"978-953-51-2255-5",printIsbn:null,pdfIsbn:"978-953-51-4206-5",doi:"10.5772/60630",price:119,priceEur:129,priceUsd:155,slug:"recent-advances-in-biopolymers",numberOfPages:288,isOpenForSubmission:!1,isInWos:1,isInBkci:!0,hash:"49b676f9ac3f7097cd3d01b379cde9b4",bookSignature:"Farzana Khan Perveen",publishedDate:"March 9th 2016",coverURL:"https://cdn.intechopen.com/books/images_new/5089.jpg",numberOfDownloads:26091,numberOfWosCitations:74,numberOfCrossrefCitations:50,numberOfCrossrefCitationsByBook:1,numberOfDimensionsCitations:123,numberOfDimensionsCitationsByBook:1,hasAltmetrics:1,numberOfTotalCitations:247,isAvailableForWebshopOrdering:!0,dateEndFirstStepPublish:"April 22nd 2015",dateEndSecondStepPublish:"May 13th 2015",dateEndThirdStepPublish:"August 17th 2015",dateEndFourthStepPublish:"November 15th 2015",dateEndFifthStepPublish:"December 15th 2015",currentStepOfPublishingProcess:5,indexedIn:"1,2,3,4,5,6,7,8",editedByType:"Edited by",kuFlag:!1,featuredMarkup:null,editors:[{id:"75563",title:"Dr.",name:"Farzana Khan",middleName:null,surname:"Perveen",slug:"farzana-khan-perveen",fullName:"Farzana Khan Perveen",profilePictureURL:"https://mts.intechopen.com/storage/users/75563/images/system/75563.jpg",biography:"Dr. Farzana Khan Perveen (FLS; Gold Medalist) obtained her BSc (Hons) and MSc in Entomology from the University of Karachi, Pakistan, and MAS (Monbusho Scholarship) in Agronomy from Nagoya University, Japan, and a Ph.D. in Toxicology from the University of Karachi. She is the founder of the Department of Zoology and former controller of examinations at Shaheed Benazir Bhutto University, Hazara University, and Kohat University of Science and Technology. She is the author of 150 high-impact research papers, 135 abstracts, 40 authored books, 9 chapters, and 9 edited books. She is also a student supervisor. Her fields of interest are entomology, toxicology, forensic entomology.",institutionString:"Classes et Events in Sciences (C.E.S.)",position:null,outsideEditionCount:0,totalCites:0,totalAuthoredChapters:"6",totalChapterViews:"0",totalEditedBooks:"7",institution:null}],equalEditorOne:null,equalEditorTwo:null,equalEditorThree:null,coeditorOne:null,coeditorTwo:null,coeditorThree:null,coeditorFour:null,coeditorFive:null,topics:[{id:"915",title:"Polymers",slug:"materials-science-biochemistry-polymers"}],chapters:[{id:"49603",title:"Biopolymers from Waste Biomass — Extraction, Modification and Ulterior Uses",doi:"10.5772/61855",slug:"biopolymers-from-waste-biomass-extraction-modification-and-ulterior-uses",totalDownloads:2425,totalCrossrefCites:3,totalDimensionsCites:9,hasAltmetrics:0,abstract:"The residues coming from woodlands and agricultural exploitation constitute the most abundant biomass available on earth. Its importance as a source of renewable energy has grown in addition to the environmental impact. Biomass waste is a lignocellulosic feedstock which contains three main biopolymers: cellulose, hemicellulose and lignin. It could be utilized for the production of a number of value-added products due to their chemical composition, but it is necessary to efficiently recover the valuable biopolymer as intact as possible by different processing techniques.For different applications, the principal objective of pre-treatment is to keep the cellulose intact, meanwhile hemicellulose and lignin are removed. The yields of the fractions depend on the pre-treatment method, which is the most expensive step in biomass conversion. Traditionally, cellulose is obtained by kraft, sulphite and soda treatments. These methods are non-environmentally friendly and generate huge quantities of toxic wastes. Recently developed models considering the environmental laws encourage the sustainable processing of biomass into value-added products. The use of ionic liquids as new solvents for biomass waste and organosolv processes is reviewed, which are used to obtain cellulose. One of the possible applications of cellulose is membrane synthesis, which has been reported for other biomass materials, such as sugarcane bagasse, mango seed and newspaper. In this chapter, some green pre-treatment methods, different sustainable routes for cellulose modification and some of the results obtained on membrane development based on waste biomass are discussed.",signatures:"Lourdes Ballinas-Casarrubias, Alejandro Camacho-Davila, Nestor\nGutierrez-Méndez, Víctor Hugo Ramos-Sánchez, David Chávez-\nFlores, Laura Manjarrez-Nevárez, Gerardo Zaragoza-Galán and\nGuillermo González-Sanchez",downloadPdfUrl:"/chapter/pdf-download/49603",previewPdfUrl:"/chapter/pdf-preview/49603",authors:[{id:"176618",title:"Ph.D.",name:"Lourdes",surname:"Ballinas",slug:"lourdes-ballinas",fullName:"Lourdes Ballinas"}],corrections:null},{id:"49783",title:"Biopolymer-mediated Green Synthesis of Noble Metal Nanostructures",doi:"10.5772/62127",slug:"biopolymer-mediated-green-synthesis-of-noble-metal-nanostructures",totalDownloads:2235,totalCrossrefCites:3,totalDimensionsCites:12,hasAltmetrics:0,abstract:"Polymer-coated noble metal nanoparticles are currently of particular interest to investigators in the fields of nanobiomedicine and fundamental biomaterials. These materials not only exhibit imaging properties in response to stimuli but also efficiently deliver various drugs and therapeutic genes. Even though a large number of polymer-coated noble metal nanoparticles have been fabricated over the past decade, most of these materials still present some challenges emanating from their synthesis. The metal nanoparticles when encapsulated in a polymer and taken up by human cells might show a lower degree of toxicity; however, the degree of toxicity for some of the starting materials and precursors has raised serious concerns. Hence, there is a need to implement the principle of green chemistry in the synthesis of nanomaterials. The use of environmentally benign materials for the synthesis of metal nanoparticles provides numerous benefits ranging from biocompatibility, availability, cost-effectiveness, amenable scale-up to eco-friendliness. The biopolymer-based nanovehicles have been found to be more suitable in the field of nanotechnology owing to their high reproducibility, ease of manufacture, functional modification and safety (they are not carcinogenic). Unlike synthetic polymers where the raw material can be derived from petrochemicals or chemical industrial processes, biopolymers are produced from renewable resources such as plant and/or living organism. They are degradable by natural processes down to elemental entities that can be resorbed in the environment. Furthermore, they can also be modified to serve a particular purpose which explains the myriad of their potential applications. The macromolecular chain of these biopolymers possesses a large number of hydroxyl groups which can easily complex with metal ions. Additionally, these biopolymers also contain supramolecular structures that can lead to new functionalities of their composites with metal and semiconductor nanoparticles. In this chapter, a comprehensive discussion on different biopolymers, green synthesis of noble metal nanostructures, mechanisms, characterization and application in various fields is presented.",signatures:"Olayemi J. Fakayode, Adewale O. Oladipo, Oluwatobi S. Oluwafemi\nand Sandile P. Songca",downloadPdfUrl:"/chapter/pdf-download/49783",previewPdfUrl:"/chapter/pdf-preview/49783",authors:[{id:"99092",title:"Prof.",name:"Samuel Oluwatobi",surname:"Oluwafemi",slug:"samuel-oluwatobi-oluwafemi",fullName:"Samuel Oluwatobi Oluwafemi"},{id:"142257",title:"Prof.",name:"Sandile",surname:"Songca",slug:"sandile-songca",fullName:"Sandile Songca"},{id:"180197",title:"Mr.",name:"Olayemi",surname:"Fakayode",slug:"olayemi-fakayode",fullName:"Olayemi Fakayode"},{id:"180198",title:"Mr.",name:"Adewale",surname:"Oladipo",slug:"adewale-oladipo",fullName:"Adewale Oladipo"}],corrections:null},{id:"49884",title:"Biopolymers – Application in Nanoscience and Nanotechnology",doi:"10.5772/62225",slug:"biopolymers-application-in-nanoscience-and-nanotechnology",totalDownloads:8318,totalCrossrefCites:27,totalDimensionsCites:71,hasAltmetrics:1,abstract:"In order to reduce the use of non-renewable resources and to minimize the environmental pollution caused by synthetic materials, the quest for utilizing biomaterials is on a rise. Biopolymers in nature are produced by a range of microorganisms and plants. Biopolymers produced by microorganisms require specific nutrients and controlled environmental conditions. This chapter discusses the recent developments and trends of biopolymers especially in the field of nanotechnology. A basic introduction regarding biopolymers is included at the beginning of the chapter. A detailed discussion on various characterization techniques used for characterizing biopolymers and various frequently used biopolymers is also included. Applications of biopolymers in various fields, especially in the field related to nanoscience and nanotechnology, is elaborated at the end of the chapter. Biopolymers together with nanotechnology have already found many applications in various fields including water treatment, biomedical application, energy sector, and food industry. This chapter is intended to give an overview on the importance of biopolymers in nanotechnology-based applications.",signatures:"Sneha Mohan, Oluwatobi S. Oluwafemi, Nandakumar Kalarikkal,\nSabu Thomas and Sandile P. Songca",downloadPdfUrl:"/chapter/pdf-download/49884",previewPdfUrl:"/chapter/pdf-preview/49884",authors:[{id:"99092",title:"Prof.",name:"Samuel Oluwatobi",surname:"Oluwafemi",slug:"samuel-oluwatobi-oluwafemi",fullName:"Samuel Oluwatobi Oluwafemi"}],corrections:null},{id:"49677",title:"Biopolymer Thin Films Synthesized by Advanced Pulsed Laser Techniques",doi:"10.5772/61734",slug:"biopolymer-thin-films-synthesized-by-advanced-pulsed-laser-techniques",totalDownloads:2123,totalCrossrefCites:7,totalDimensionsCites:7,hasAltmetrics:1,abstract:"This chapter provides an overview of recent advances in the field of laser-based synthesis of biopolymer thin films for biomedical applications. The introduction addresses the importance of biopolymer thin films with respect to several applications like tissue engineering, cell instructive environments, and drug delivery systems. The next section is devoted to applications of the fabrication of organic and hybrid organic–inorganic coatings. Matrix-assisted pulsed laser evaporation (MAPLE) and Combinatorial-MAPLE are introduced and compared with other conventional methods of thin films assembling on solid substrates. Advantages and limitations of the methods are pointed out by focusing on the delicate transfer of bio-macromolecules, preservation of properties and on the prospect of combinatorial libraries’ synthesis in a single-step process. The following section provides a brief description of fundamental processes involved in the molecular transfer of delicate materials by MAPLE. Then, the chapter focuses on the laser synthesis of two polysaccharide thin films, namely Dextran doped with iron oxide nanoparticles and Levan, followed by an overview on the MAPLE synthesis of other biopolymers. The chapter ends with summary and perspectives of this fast-expanding research field, and a rich bibliographic database.",signatures:"Emanuel Axente, Felix Sima, Carmen Ristoscu, Natalia Mihailescu\nand Ion N. Mihailescu",downloadPdfUrl:"/chapter/pdf-download/49677",previewPdfUrl:"/chapter/pdf-preview/49677",authors:[{id:"17520",title:"Dr.",name:"Felix",surname:"Sima",slug:"felix-sima",fullName:"Felix Sima"},{id:"17636",title:"Prof.",name:"Ion N.",surname:"Mihailescu",slug:"ion-n.-mihailescu",fullName:"Ion N. Mihailescu"},{id:"44146",title:"Dr.",name:"Natalia",surname:"Mihailescu",slug:"natalia-mihailescu",fullName:"Natalia Mihailescu"},{id:"60531",title:"Dr.",name:"Carmen-Georgeta",surname:"Ristoscu",slug:"carmen-georgeta-ristoscu",fullName:"Carmen-Georgeta Ristoscu"},{id:"177737",title:"Dr.",name:"Emanuel",surname:"Axente",slug:"emanuel-axente",fullName:"Emanuel Axente"}],corrections:null},{id:"49720",title:"Hydrogels for Regenerative Medicine",doi:"10.5772/62044",slug:"hydrogels-for-regenerative-medicine",totalDownloads:2193,totalCrossrefCites:1,totalDimensionsCites:4,hasAltmetrics:0,abstract:"Regenerative medicine requires materials that are biodegradable, biocompatible, structurally and chemically stable, and that can mimic the properties of the native extracellular matrix (ECM). Hydrogels are hydrophilic three-dimensional networks that have long received attention in the field of regenerative medicine due to their unique properties. Hydrogels have a potential to be the future of regenerative medicine due to their desirable mechanical and chemical properties, ease of their synthesis, and their multiple applicability as drug delivery vehicles, scaffolds, and constructs for cell culture. In this chapter, we have described hydrogels in terms of their cross-linking and then discussed the most recent developments in the use of hydrogels for peripheral nerve regeneration, tooth regeneration, and 3D bioprinting.",signatures:"Divya Bhatnagar, Marcia Simon and Miriam H. Rafailovich",downloadPdfUrl:"/chapter/pdf-download/49720",previewPdfUrl:"/chapter/pdf-preview/49720",authors:[{id:"176721",title:"Dr.",name:"Divya",surname:"Bhatnagar",slug:"divya-bhatnagar",fullName:"Divya Bhatnagar"},{id:"176796",title:"Prof.",name:"Miriam",surname:"Rafailovich",slug:"miriam-rafailovich",fullName:"Miriam Rafailovich"},{id:"180405",title:"Prof.",name:"Marcia",surname:"Simon",slug:"marcia-simon",fullName:"Marcia Simon"}],corrections:null},{id:"49694",title:"Nano-biomaterials in Antimicrobial Therapy",doi:"10.5772/61959",slug:"nano-biomaterials-in-antimicrobial-therapy",totalDownloads:1948,totalCrossrefCites:0,totalDimensionsCites:0,hasAltmetrics:0,abstract:"Silver nanoparticles (AgNps) have attracted much interest in biomedical engineering, since they have excellent antimicrobial properties. Silver nanopolymer composites have applications in biochemical sensors, antimicrobial activity and drug delivery system. Silver nanoparticles are more effective than ionic homologues (Ag+) for their antimicrobial activity. Antimicrobial properties of silver nanoparticles are used by their incorporation into medical devices, tissues and other health-related products for skin pathologies to reduce the risk of contamination and to promote higher preventive infection control. Novel hybrid material thin films based on various polymeric systems with embedded silver nanoparticles were synthesized using various methods. The electrical, optical and plasmonic responses of AgNps onto thin layers of polymer composites show encapsulation of nanoparticles. The antibacterial activity of AgNps/polymer composites against various common bacteria is discussed in this chapter. The antibacterial activity of the synthesized hybrid materials was tested against various bacteria, commonly found in hospital environment. Silver nanostructures have especially been of interest because of contrast agents for biomedical image. Shunts used for hydrocephalous silicon elastomer grafted with hydrogel, polyvinylpyrrolidone (PVP) soaked in various antibiotics proved to be active for longer time.",signatures:"Pratima Parashar Pandey",downloadPdfUrl:"/chapter/pdf-download/49694",previewPdfUrl:"/chapter/pdf-preview/49694",authors:[{id:"142089",title:"Dr.",name:"Pratima",surname:"Parashar Pandey",slug:"pratima-parashar-pandey",fullName:"Pratima Parashar Pandey"}],corrections:null},{id:"49938",title:"Spectroscopic Characterization of Multilayered Functional Protective Polymers via Surface Modification with Organic Polymers against Highly Toxic Chemicals",doi:"10.5772/62154",slug:"spectroscopic-characterization-of-multilayered-functional-protective-polymers-via-surface-modificati",totalDownloads:1997,totalCrossrefCites:0,totalDimensionsCites:0,hasAltmetrics:0,abstract:"Recent advances in biopolymers, including functional biomaterials for the manufacture of personal protective garments (PPGs) or equipment (PPE) have dramatically improved their efficiency and performance. Good and acceptable permeation characteristics, mechanical strength and durability are common attributes of these materials simultaneously without compromise for their cost-effectiveness and manufacturability. The comprehensive characterization of these materials and specimens’ three-dimensionality with the endeavor to obtain the highest resistance to highly toxic agents such as nuclear, chemical and biological warfare agents is the must fulfilling aim in today’s global interest in continuous development in this area.",signatures:"Peter P. Ndibewu, Prince Ngobeni, Tina E. Lefakane and Taki E.\nNetshiozwi",downloadPdfUrl:"/chapter/pdf-download/49938",previewPdfUrl:"/chapter/pdf-preview/49938",authors:[{id:"87629",title:"Prof.",name:"Peter",surname:"Ndibewu",slug:"peter-ndibewu",fullName:"Peter Ndibewu"},{id:"163823",title:"Prof.",name:"Prince",surname:"Ngobeni",slug:"prince-ngobeni",fullName:"Prince Ngobeni"},{id:"176860",title:"Dr.",name:"Taki",surname:"Netshioswi",slug:"taki-netshioswi",fullName:"Taki Netshioswi"},{id:"177770",title:"Mrs.",name:"Tina",surname:"Lefakane",slug:"tina-lefakane",fullName:"Tina Lefakane"}],corrections:null},{id:"49593",title:"A Novel Application of Oceanic Biopolymers — Strategic Regulation of Polymer Characteristics for Membrane Technology in Separation Engineering",doi:"10.5772/61998",slug:"a-novel-application-of-oceanic-biopolymers-strategic-regulation-of-polymer-characteristics-for-membr",totalDownloads:1624,totalCrossrefCites:1,totalDimensionsCites:3,hasAltmetrics:0,abstract:"Membranes prepared from oceanic biopolymers have a high potential in membrane separation processes and water purification. It is anticipated to result in more biocompatible and lower-cost materials compared with artificial polymers. This chapter describes the excellent performance of oceanic biopolymer membranes in separation engineering and the regulation factors controlling membrane properties. In particular, chitosan and alginate were picked up as intelligent membrane materials to provide the promised molecular size recognition and other membrane properties. Future prospective strategies for a simple methodology for preparing stable membranes from oceanic biopolymers and the development of selective separation processing were reviewed.",signatures:"Keita Kashima, Ryuhei Nomoto and Masanao Imai",downloadPdfUrl:"/chapter/pdf-download/49593",previewPdfUrl:"/chapter/pdf-preview/49593",authors:[{id:"47877",title:"Prof.",name:"Masanao",surname:"Imai",slug:"masanao-imai",fullName:"Masanao Imai"},{id:"176857",title:"Dr.",name:"Keita",surname:"Kashima",slug:"keita-kashima",fullName:"Keita Kashima"}],corrections:null},{id:"49650",title:"Bio-Interfaces Engineering Using Laser-Based Methods for Controlled Regulation of Mesenchymal Stem Cell Response In Vitro",doi:"10.5772/61516",slug:"bio-interfaces-engineering-using-laser-based-methods-for-controlled-regulation-of-mesenchymal-stem-c",totalDownloads:1651,totalCrossrefCites:8,totalDimensionsCites:16,hasAltmetrics:0,abstract:"The controlled interfacial properties of materials and modulated behaviours of cells and biomolecules on their surface are the requirements in the development of a new generation of high-performance biomaterials for regenerative medicine applications. Roughness, chemistry and mechanics of biomaterials are all sensed by cells. Organization of the environment at the nano- and the microscale, as well as chemical signals, triggers specific responses with further impact on cell fate. Particularly, human mesenchymal stem cells (hMSCs) hold a great promise in both basic developmental biology studies and regenerative medicine, as progenitors of bone cells. Their fate can be affected by various key regulatory factors (e.g. soluble growth factors, intrinsic, extrinsic environmental factors) that can be delivered by a fabricated scaffold. For example, when cultured on engineered environments that reproduce the physical features of the bone, hMSCs express tissue-specific transcription factors and consequently undergo an osteogenic fate. Therefore, producing smart bio-interfaces with targeted functionalities represents the key point in effective use of hierarchically topographical and chemical bioplatforms. In this chapter, we review laser-based approaches (e.g. Matrix-Assisted Pulsed Laser Evaporation (MAPLE), Laser-Induced Forward Transfer (LIFT), laser texturing and laser direct writing) used for the design of bio-interfaces aimed at controlling stem cell behaviour in vitro.",signatures:"Valentina Dinca, Livia Elena Sima, Laurentiu Rusen, Anca Bonciu,\nThomas Lippert, Maria Dinescu and Maria Farsari",downloadPdfUrl:"/chapter/pdf-download/49650",previewPdfUrl:"/chapter/pdf-preview/49650",authors:[{id:"32241",title:"Dr.",name:"Maria",surname:"Dinescu",slug:"maria-dinescu",fullName:"Maria Dinescu"},{id:"176506",title:"Dr.",name:"Valentina",surname:"Dinca",slug:"valentina-dinca",fullName:"Valentina Dinca"},{id:"176781",title:"Dr.",name:"Valentina",surname:"Dinca",slug:"valentina-dinca",fullName:"Valentina Dinca"},{id:"176782",title:"Dr.",name:"Livia Elena",surname:"Sima",slug:"livia-elena-sima",fullName:"Livia Elena Sima"},{id:"176783",title:"Dr.",name:"Laurentiu",surname:"Rusen",slug:"laurentiu-rusen",fullName:"Laurentiu Rusen"},{id:"177678",title:"Dr.",name:"Thomas",surname:"Lippert",slug:"thomas-lippert",fullName:"Thomas Lippert"},{id:"177679",title:"Dr.",name:"Maria",surname:"Farsari",slug:"maria-farsari",fullName:"Maria Farsari"},{id:"177680",title:"B.Sc.",name:"Anca",surname:"Bonciu",slug:"anca-bonciu",fullName:"Anca Bonciu"}],corrections:null},{id:"49675",title:"TI2BioP — Topological Indices to BioPolymers. A Graphical– Numerical Approach for Bioinformatics",doi:"10.5772/61887",slug:"ti2biop-topological-indices-to-biopolymers-a-graphical-numerical-approach-for-bioinformatics",totalDownloads:1580,totalCrossrefCites:0,totalDimensionsCites:1,hasAltmetrics:1,abstract:"We developed a new graphical–numerical method called TI2BioP (Topological Indices to BioPolymers) to estimate topological indices (TIs) from two-dimensional (2D) graphical approaches for the natural biopolymers DNA, RNA and proteins The methodology mainly turns long biopolymeric sequences into 2D artificial graphs such as Cartesian and four-color maps but also reads other 2D graphs from the thermodynamic folding of DNA/RNA strings inferred from other programs. The topology of such 2D graphs is either encoded by node or adjacency matrixes for the calculation of the spectral moments as TIs. These numerical indices were used to build up alignment-free models to the functional classification of biosequences and to calculate alignment-free distances for phylogenetic purposes. The performance of the method was evaluated in highly diverse gene/protein classes, which represents a challenge for current bioinformatics algorithms. TI2BioP generally outperformed classical bioinformatics algorithms in the functional classification of Bacteriocins, ribonucleases III (RNases III), genomic internal transcribed spacer II (ITS2) and adenylation domains (A-domains) of nonribosomal peptide synthetases (NRPS) allowing the detection of new members in these target gene/protein classes. TI2BioP classification performance was contrasted and supported by predictions with sensitive alignment-based algorithms and experimental outcomes, respectively. The new ITS2 sequence isolated from Petrakia sp. was used in our graphical–numerical approach to estimate alignment-free distances for phylogenetic inferences. Despite TI2BioP having been developed for application in bioinformatics, it can be extended to predict interesting features of other biopolymers than DNA and protein sequences. TI2BioP version 2.0 is freely available from http://ti2biop.sourceforge.net/.",signatures:"Guillermin Agüero-Chapin, Reinaldo Molina-Ruiz, Gisselle Pérez-\nMachado, Vitor Vasconcelos, Zenaida Rodríguez-Negrin and\nAgostinho Antunes",downloadPdfUrl:"/chapter/pdf-download/49675",previewPdfUrl:"/chapter/pdf-preview/49675",authors:[{id:"176821",title:"Prof.",name:"Agostinho",surname:"Antunes",slug:"agostinho-antunes",fullName:"Agostinho Antunes"}],corrections:null}],productType:{id:"1",title:"Edited Volume",chapterContentType:"chapter",authoredCaption:"Edited by"},subseries:null,tags:null},relatedBooks:[{type:"book",id:"2036",title:"Insecticides",subtitle:"Advances in Integrated Pest Management",isOpenForSubmission:!1,hash:"42dc69ce20386f76845e38275b0e54e8",slug:"insecticides-advances-in-integrated-pest-management",bookSignature:"Farzana Perveen",coverURL:"https://cdn.intechopen.com/books/images_new/2036.jpg",editedByType:"Edited by",editors:[{id:"75563",title:"Dr.",name:"Farzana 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Rodge",coverURL:"https://cdn.intechopen.com/books/images_new/10309.jpg",editedByType:"Edited by",editors:[{id:"292494",title:"Dr.",name:"Mahesh",surname:"Goenka",slug:"mahesh-goenka",fullName:"Mahesh Goenka"}],productType:{id:"1",chapterContentType:"chapter",authoredCaption:"Edited by"}}]},chapter:{item:{type:"chapter",id:"17760",title:"Approaches in Gene Therapy of Cancer and Cardiovascular Diseases",doi:"10.5772/18280",slug:"approaches-in-gene-therapy-of-cancer-and-cardiovascular-diseases",body:'In this chapter we will focus on few topics. First, we summarize and discuss angiogenic gene therapy of cancer and cardiovascular diseases, with RNA interference in a separate section. Second, we briefly review delivering systems in gene therapy, their advatages and limitations and further focus on bacterial vectors. Last, we summarize antioxidant gene therapy of cardiovascular diseases and hypertension.
Considering the fact that the fundamental discoveries and new findings in medicine are being crystallized on genetic and genomic levels, gene therapy is one of the potential mechanisms for therapeutic intervention. Gene therapy in a broad sense, i.e. all the therapeutic strategies employing nucleic acids as carriers of genetic information, found its utilization in most areas of medicine, including angiogenesis research. Similarly to classical “non-gene“ therapy, the research in gene therapy is happening on the preclinical level using appropriate animal models, with cancer and cardiovascular diseases being the most abundant indications. There are several different strategies known. Besides the delivery of therapeutic gene (replacement of the mutated gene by a functional one or delivery of the gene because of lack of the gene product), novel strategies are also being widely used based on blocking the function of a specific gene by application of RNA interference inducing sequences, antisense inhibition etc.
One of the key advantages of gene approaches is the endogenous production of the therapeutic molecule. Furthermore, targeted gene delivery specifically into the target tissue or only to a certain cell type can dramatically decrease the likelihood of adverse effects. Along with the development of new vectors and regulatory systems, the ability to control the expression of therapeutic gene in time and space is being improved. This is of great importance in affecting such complex and complicated processes as angiogenesis. Currently, almost three quarters of indications addressed by gene therapy clinical trials are represented by cancer and cardiovascular diseases
After birth, angiogenesis still contributes to organ growth. However, in adults, the majority of blood vessels remains in quiescence with the most active angiogenesis during menstruation cycle in the uterus and pregnancy in the placenta. In spite of this, endothelial cells do preserve the ability to quickly proliferate and react to physiological stimulus such as hypoxia and inflammation.
If the stimulus is too excessive, the fine balance between stimulants and inhibitors can be disrupted and thus lead to so-called “angiogenic switch”. The best described pathological states with dysregulated angiogenesis include cancer, cardiovascular disorders, inflammatory eye disorders as well as many other processes such as obesity, metabolic diseases, asthma, diabetes mellitus, cirrhosis, sclerosis multiplex, rheumatoid arthritis, macular degeneration, psoriasis, atherosclerosis, restenosis, diabetic retinopathy, endometriosis, bacterial infections and autoimmune diseases (Cao, 2010; Webb & Vande Woude, 2000).
Gene therapy-based angiogenesis inhibiting strategies have gained much attention thanks to their advantages over the conventional antiangiogenic treatments. Given that effective inhibition of pathological angiogenesis requires long term treatment, gene therapy may be of importance for selective gene transfer to the affected areas and prolonged expression of therapeutic genes. Apart from that, gene therapy provides a possibility to circumvent the issues associated with recombinant proteins production, stability and solubility. Gene transfer allows for appropriate folding and stability of encoded proteins
Antiangiogenic gene therapy of cancer has been tested on a preclinical level in various carcinogenesis models. Most of the studies performed so far have used viral vectors (adenoviruses, retroviruses, lentiviruses, adeno-associated viruses, herpes simplex viruses) encoding endogenous angiogenesis inhibitor genes such as cytokines/chemokines (IFN-α, IFN-β, IFN-γ, CXCL10, IL-12, IL-18, TNF-α), VEGF blockers (sFlt-1, Flk-1), proteolytic fragments (angiostatin, endostatin, vasostatin, tumstatin) and others (Persano et al., 2007). For example, in a colorectal cancer model an adenovirus-based therapy using genes encoding IFN-β (Tada et al., 2001) and endostatin (Oliner et al., 2004) as well as plasmids encoding Flk-1 (W.J. Kim et al., 2006) and tumstatin (Yao et al., 2005) have been successfully applied. In a model of malignant melanoma, retrovirus vectors carrying gene encoding CXCL10 (Feldman et al., 2002) and plasmids encoding vasostatin (Jazowiecka-Rakus et al., 2006) and MCP-1 (Koga et al., 2008) genes have been successfully used, all exerting a clear antiangiogenic effect. Recently, a systemically available antiangiogenic gene therapy using adenovirus bearing soluble VEGF receptor gene has been proven to be effective in suppressing tumor growth in various oral cancer cell line xenografts in mice (Okada et al., 2010).
Several studies have been performed using gene delivery of endogenous angiogenesis inhibitor endostatin. A liposome-encapsulated adenovirus encoding endostatin was applied in therapy of ovarian cancer (Yang et al., 2010). Systemic administration was well-tolerated and resulted in marked suppression of tumor growth, which was associated with a decreased number of micro-vessels and increased apoptosis of tumor cells. An interesting novel therapeutic approach for pancreatic cancer has been employed in a study using vaccinia virus encoding the endostatin-angiostatin fusion gene (Tysome et al., 2009). Besides high selectivity of the used vector, inhibition of angiogenesis and a clear antitumor potency has been observed. In another study, combined antiangiogenic and proapoptotic gene therapy involving endostatin and sTRIAL (soluble tumor necrosis factor-related apoptosis-inducing ligand) effectively suppressed hepatocellular carcinoma growth and angiogenesis in nude mice (Zhang et al., 2009). At last, adenovirus-mediated endostatin gene delivery combined with cisplatin treatment was effective in a lung cancer murine model (Ning et al., 2008). These studies represent a future direction in cancer research in which instead of targeting a single molecule, a combinatorial approach targeting multiple factors and/or an additional therapeutic approach is applied to cover multiple pathways of cancer progression.
Despite a relatively high number of clinical studies using cancer gene therapy, specifically antiangiogenic gene therapy has only been exploited in a few studies. Intratumoral injection of adenovirus encoding immunostimulatory cytokine IL-12 has been tested in patients with advanced gastrointestinal cancer (liver, colorectal, pancreatic tumors) in phase I study (Sangro et al., 2004). Therapy was well tolerated, although only a moderate antitumor effect was observed. In another study, plasmid bearing IL-12 gene was applied to patients with malignant melanoma (Heinzerling et al., 2005). In two out of nine patients, the disease was stabilized for period of over three years and a complete remission was achieved in one patient. In these patients, a localized reduction in angiogenesis has been proven by immunohistochemistry. However, the rest of the patients showed only temporal response to the therapy. A recent phase I clinical trial of IL-12 plasmid/lipopolymer complexes has also shown a clinical benefit in treatment of recurrent ovarian cancer without adverse events (Anwer et al., 2010). In a different phase I study, adenovirus vector carrying IFN-β gene has been used in therapy of malignant pleural mesothelioma (Sterman et al., 2007). In all the above-mentioned studies, however, inhibition of angiogenesis was not the primary goal, yet a part of the antitumor effect.
In view of the many advances in explaining the molecular mechanisms of angiogenesis high hopes were put in gene therapy. However, in the clinical studies with genes encoding for individual proangiogenic growth factors (similar to recombinant proteins) only moderate success has been observed so far, thus creating a space for development of new vectors and alternative approaches (Vincent et al., 2007).
Progress in the field of gene therapy for cardiovascular disease has been modest; one of the key reasons for this limited progress is the lack of gene delivery systems for localizing gene therapy to specific sites to optimize transgene expression and efficacy. However, progress toward the site-specific delivery of cardiovascular gene therapy is still ongoing and promising novel approaches are being tested (Fishbein et al., 2010).
A lot of studies have been performed on a preclinical level with very promising results. Angiogenic gene therapy using intramuscular injection of plasmids encoding VEGF and plasminogen activator has been applied in a mouse model of myocardial infarction (ligation of coronary artery) and hind limb ischemia (ligation of arteria femoralis) (Traktuev et al., 2007). Authors were able to detect functionally significant angiogenesis that clearly improved the pathological consequences of disease induction. The model of hind limb ischemia is actually a commonly used model to prove the efficiency of proangiogenic viral and non-viral gene delivery in ischemic disease (Schgoer et al., 2009). Bosch-Marce
Results from several interesting clinical studies have been published recently. In a phase I study testing the safety of intramuscular injection of VEGF-encoding plasmid vector in 9 patients suffering from serious peripheral arterial disease of the lower extremities a significant improvement in most of the measured parameters has been observed regardless of the dose (Kim et al., 2004). However, the serum VEGF levels were not elevated and the control group was missing in that study. Interestingly, no significant improvement in primary and secondary endpoints between groups was achieved in two recent multicenter, double-blind, placebo-controlled phase II trials exploring intramuscular application of plasmid encoding angiogenic factors (Grossman et al., 2007; Rajagopalan et al., 2003). Authors of Euroinject One phase II trial analyzed the effect of gene transfer using plasmid encoding VEGF165 gene on myocardial perfusion, left ventricle function and clinical symptoms in 80 patients suffering from stable severe ischemic heart disease (Kastrup et al., 2005). A direct intramyocardial injection of plasmid did not improve the study endpoints compared to placebo, although a regional improvement in ventricle wall movement was achieved. Results thus show the safety of direct intramyocardial injection, but not the efficiency. In the REVASC trial, a total of 67 patients with ischemic heart disease and severe angina pectoris were enrolled to the study (Stewart et al., 2006). Here, the intramyocardial injection of replication-deficient adenovirus vector bearing VEGF121 gene significantly ameliorated the primary endpoint (exercise time needed for 1mm ST segment depression) as well as overall exercise time and exercise time to moderate angina after 26 weeks of therapy in patients with exercise-induced ischemia. On the other hand, in a recent double-blind, placebo-controlled study VEGF gene therapy failed to improve perfusion of ischemic myocardium in patients with advanced coronary artery disease (Stewart et al., 2009). Further, intramuscular injection of plasmid with VEGF gene was compared against placebo (saline) in 54 diabetic patients suffering from severe peripheral arterial disease (Kusumanto et al., 2006). Although a significant improvement of some of the parameters (hemodynamic status, skin ulcerations) has been achieved, the primary endpoint of this study – amputation of lower extremity after 100 days – stayed unchanged. Moreover, long-term safety of VEGF gene therapy has been proven in an eight-year safety follow-up of coronary artery disease patients after intracoronary VEGF gene transfer (Hedman et al., 2009). Local intracoronary VEGF gene delivery is, thus, considered safe and does not increase the risk of major adverse cardiovascular events, arrhythmias, cancer, diabetes or other disease.
So far the only clinical study testing the delivery of HIF-1α gene was a randomized, double-blind, placebo-controlled phase I trial enrolling 34 patients with peripheral arterial disease (Rajagopalan et al., 2007). Treatment based on direct intramuscular administration of adenovirus vector carrying the HIF-1α gene was well tolerated and provided relief of rest pain one year after the therapy, supporting the necessity for more clinical trials.
The second generation of angiogenic gene therapeutics is represented by constructs enabling the expression of two or more proangiogenic cytokines. Analogous to gene therapy using the master regulatory gene HIF-1α, these “multivalent” approaches may provide a benefit against the classical “monovalent” ones (Vincent et al., 2007).
Overall, we might conclude that only slight clinical benefit of gene therapy in cardiovascular diseases has been observed so far on the level of multicenter, randomized, placebo-controlled clinical trials. This finding, however, is in direct contrast to promising and convincing results from preclinical studies and, thus, further stimulates searching for new and alternative approaches in experimental as well as clinical settings. New viruses have been introduced and new results have been collected from preclinical and clinical studies. Recent results from preclinical developments and clinical trials have been reviewed (Karvinen & Yla-Herttuala, 2010).
Since the first discoveries of RNA interference mechanism (RNAi) 13 years ago, much new information has shown up and a new age of gene therapy, in broad sense, has actually begun. This molecular phenomenon found its usage, besides in functional genetic studies, also in therapy based on silencing the expression of disease-causing genes (so called gene knock-down).
One of the main obstacles in achieving
One of the break-through experiments was based on intravenous administration of chemically modified siRNA against endogenous apolipoprotein B (apoB) in mice leading to apoB mRNA silencing in liver and jejunum as well as decrease in plasma levels of apoB and overall cholesterol (Soutschek et al., 2004). These siRNA even reduced the expression of human apoB in transgenic mice, and the results further extended the potential of RNAi-based therapy of not only cardiovascular diseases.
Several studies have been performed to test the efficiency of RNAi in therapy/prevention of cardiovascular diseases. It is known that activation of NFkappaB pathway can be associated with development of cardiac hypertrophy and its transition to heart failure. Intramyocardial delivery of shRNA against NFkappaB in lentiviral vector has led to regression of cardiac hypertrophy in transgenic mice, suggesting the potential role of NFkappaB as a therapeutic target in prevention of hypertrophy/heart failure (Gupta et al., 2008). Similar results have been observed in a model of pressure-induced hypertrophy using systemic administration of siRNA against focal adhesion kinase (FAK), which acts as one of the hypertrophy mediators (Clemente et al., 2007). In the work of Jiang
Antiangiogenic therapy using RNAi has found its broad experimental application (Hadj-Slimane et al., 2007). Silencing of HIF-1α by RNAi leads to transient stasis or regression of tumors
One of the most important papers in recent years was the study of Kleinman
Apart from RNAi, another big area of small RNA-related research that is gaining much more attention these days is the microRNA research. More importantly, microRNA have been found to play a key role in regulation of angiogenesis, both in cancer and ischemic diseases, indicating that the development of clinically relevant therapies can be expected in a short time period (Fasanaro et al., 2010).
Vectors for transfer of therapeutic sequences into target cells can be divided into three basic groups: viral, non-viral (naked DNA) and bacterial. Each of these groups has different research and therapeutic indications, and features specific pros and cons (Gardlik et al., 2005\n\t\t\t\tChailertvanitkul and Pouton, 2010). Currently, the most frequently used vectors in gene therapy clinical trials include: adenoviruses (400 clinical trials; 23,8%), retroviruses (344 clinical trials; 20,5%), naked/plasmid DNA (304 clinical trials; 17,7%), adeno-associated viruses (75 clinical trials; 4,5%) and others (John Wiley & Sons, 2010).
Adenoviruses are the most commonly used gene-delivery vectors due to the efficiency of their
By 2009 over 350 protocols had been approved for clinical trials of gene therapy using attenuated adenoviral vectors, 210 of which were open, but only 5 of which were Phase III trials (for details see the Clinical Trials Worldwide Database at http://www.wiley.co.uk/genmed/clinical).
The adenovirus-based vector has been continuously improved by modification of the adenoviral genome and capsid, and novel adenovirus-delivery systems have been recently proposed (Shirakawa, 2008). Since their first clinical trial 20 years ago, retroviral vectors have now been used in more than 350 gene-therapy studies. Retroviral vectors are particularly suited for gene-correction of cells due to long-term and stable expression of the transferred transgene(s), and also because little effort is required for their cloning and production. Despite several unsuccessful attempts using retroviral therapeutics, a new generation of vectors with improved genome integration and safety characteristics are now available, making them a useful tool for several gene therapy applications (Maier et al., 2010). On contrary, adeno-associated vectors (AAV) are characterized by low frequency of random integration into the genome and moderate immune response. This makes AAV an attractive platform for vector design. Like in most other vector systems, the tropism of AAV vectors limits their utility for certain tissues especially upon systemic application. However, the tropism can be modified by targeted capsid modification and the use of different serotypes, thus making them a good cell-type specific delivery system (Michelfelder & Trepel, 2009).
Another group of delivery systems includes bacterial vectors (Gardlik et al., 2005). Owing to the specific ability of some bacterial strains to colonize hypoxic areas, bacteria found their primary application mainly in cancer therapy (Gardlik & Fruehauf, 2010). A number of experimental studies have been published to date and several clinical studies employing bacterial therapies are currently ongoing. Apart from live bacterial delivery systems, empty envelopes of Gram negative bacteria, so called bacterial ghosts are also being explored as a potential tool for gene delivery (Kudela et al., 2010). In the upcoming sections we specifically focus on modulation of angiogenesis-related events using bacterial vectors.
The first attempts at using bacteria for therapeutic purposes were made more than 40 years ago. At this time, it was discovered that bacteria could predominantly replicate in solid tumors (Moese & Moese, 1964). However, the first indications of this phenomenon date back to 19th century. These findings remained largely unexplored until the turn of 20th century, when oncolytic bacteria capable of lysing host cells were first studied by various research groups (Theys et al., 2001; Yazawa et al., 2000).
Despite recent progress, only a few recent studies on bacterial tumor therapy have focused on antiangiogenic therapy. Although effects on the vasculature were observed in most of these studies, these changes seemed to be a consequence mainly of bacteria-mediated therapy. Bacteria-mediated antiangiogenesis tumor therapy, however, is a reasonable approach given that solid tumors are often characterized by increased vascularization. Herein we summarize latest research on cancer therapy using genetically modified bacteria with particular emphasis on the potential of blocking tumor angiogenesis.
Pronounced angiogenesis is one of the hallmarks of solid tumors. Therefore, in order to search for more efficient anticancer drugs efforts are being made to block tumor angiogenesis. Despite notable successes achieved in studies using oncolytic bacteria for cancer treatment, bacteriolytic therapy in and of itself is often insufficient for complete eradication of experimental tumors (Agrawal et al., 2004). The idea of using combined therapy with bacteria and angiogenesis inhibition has therefore been suggested.
Below are reviewed four different approaches for using modified bacteria as anticancer therapeutics – bactofection, DNA vaccination, alternative gene therapy and bactoference – with a focus on angiogenesis suppression (Figure 1).
Antitumor effect of bacteria colonizing tumor tissue. Auxotrophic bacteria specifically colonize tumors with necrotic and hypoxic areas (panel on the left). The anticancer effect of bacteria can be exerted in four different ways: (a) Bactofection – after escaping the vessel and entering the target cell, bacteria disrupt and release a plasmid vector encoding the therapeutic gene. The plasmid is transferred into the cell nucleus and the therapeutic protein is expressed by the host cell’s expression system (blue square symbol). (b) DNA vaccination – bacteria deliver therapeutic plasmid into the host cell in a similar way as in bactofection. The host cell may in this case be an antigen presenting cell. The plasmid encodes a tumor cell-expressed antigen to help prime a T-cell response against the tumor antigen which is present on the surface of tumor cells leading to induction of humoral and cellular immune response against the tumor. (c) Bacterial protein delivery – bacteria, either in extracellular environment or inside tumor cells, express the therapeutic gene directly and serve as protein delivery vehicles (red square symbol). (d) Bacterial delivery of RNA interference – bacteria deliver plasmid encoding shRNAs or express the shRNAs to induce RNA interference against an oncogene or a tumor-expressed factor.
The use of bacteria as a vector for the delivery of therapeutic genes to target cells is known as bactofection, and several studies have used this approach to deliver genes encoding antiangiogenic molecules to tumor cells
It is known that bactofection of plasmids encoding a tumor-expressed antigens can lead to induction of humoral and cellular immune response in the host thereby providing protective defense against tumors (R. Xiang et al., 2000). This approach, termed DNA vaccination, has been successfully implemented for antiangiogenic therapy. Oral antiangiogenic bacterial vaccines directed against VEGFR-2 were proven to be efficacious in animal models of malignant melanoma, colorectal carcinoma and lung cancer (Niethammer et al., 2002) as well as non-cancer diseases like stromal keratitis (Kim et al., 2006) and atherosclerosis (Petrovan et al., 2007). Furthermore, salmonella-mediated vaccination against murine VEGFR-2 has been successfully combined with classical gene therapy for the treatment of malignant melanoma (Lu et al., 2008). Bacterial vaccines directed against the apoptosis inhibitor survivin (Xiang et al., 2005) and the TGF-β1 co-receptor endoglin (Lee et al., 2006) also proved to be effective in inhibition of tumor angiogenesis. Taken together, these findings underscore the key role of angiogenesis in cancer as well as other diseases and, at the same time, highlight the complexity of this essential process.
Another means of using bacteria for gene therapy is the so-called alternative gene therapy (AGT) approach, which is also known as bacterial protein delivery (Palffy et al., 2006). It is based on transfer of bacterially expressed therapeutic proteins to the host organism using genetically modified (transformed) bacteria. As with bactofection, AGT is mostly used for treatment of tumors and employs primarily oncolytic and tumor-colonizing bacterial strains of
Interestingly, previously unknown antiangiogenic effects have recently been discovered for a variety of molecules involved in the immune response and cellular apoptosis mainly due to extensive ongoing research in the field of cancer therapy. Bacteria in gene therapy, differences between bactofection and AGT, advantages and disadvantages as well as specific application of both approaches are discussed in detail in our review article (Palffy et al., 2006).
In spite of great success in a preclinical setting, the application of bacteria for human tumor therapy has not been particularly efficacious, although this approach was well tolerated in most studies (Cunningham & Nemunaitis, 2001; Nemunaitis et al., 2003; Toso et al., 2002). In light of above-mentioned findings, however, we would suggest that angiogenesis would be a meaningful target for further experimental and clinical studies of bacteria-mediated anticancer therapy, particularly if used in conjunction with oncolytic strains of bacteria.
A promising new approach for bacteria-mediated anticancer therapy is the combination of two distinct methodologies: bacteriotherapy and RNA interference. Bacteria that have engineered to produce and deliver short interfering RNA (siRNA) represent a novel tool for the efficient induction of RNA interference (RNAi) in host cells. This concept herein termed “bactoference” was first tested at the
Reactive oxygen and nitrogen species may remodel the extracellular matrix and blood vessels, cause endothelial dysfunction, induce apoptosis, exacerbate inflammatory reaction, regulate cell proliferation and key signal transduction pathways, and inhibit histone deacetylase activity involved in hypertension (Cohen and Tong, 2010; Fostermann, 2010).
Overproduction of reactive oxygen species plays an important role in a number of cardiovascular pathologies, including hypertension, atherosclerosis, myocardial infarction, ischemia/reperfusion injury, and restenosis after angioplasty.
In this section we focus on gene therapy research using experimental models of cardiovascular diseases and hypertension.
There are at least two major strategies of modulation of nitric oxide (NO) levels in hypertension and cardiovascular diseases: (i) modulation of NO levels by NO synthase (NOS) stimulation, increase in NO bioavailability, administration of NO donors or precursors, and NOS gene incorporation; (ii) scavenging of superoxide and suppression of oxidative stress by activation of antioxidant gene expression or by suppression of selected genes via knock-out or RNA silencing (Dovinova, Gardlik et al., 2009).
NO reacts with superoxide at a rate three times faster than the dismutation of superoxide by superoxide dismutase (SOD). Because of the efficiency of the reaction, the local concentration of SOD is a key determinant of bioactivity (the biological half-life) of NO. Individual SOD isoform in different cell compartments (cytosol, mitochondria, extracellular space) protects against superoxide-mediated cytotoxicity and functioning as a signaling molecule (Mendez, 2005). SOD enzymes therefore play an important role in cardiovascular tissue by protecting NO against oxidative inactivation by superoxide and they are important in vasodilatation and in the protection of NO bioactivity in blood vessel walls (Gongora & Harrison, 2008).
Gene transduction of individual SOD genes (Chu et al., 2003; Zimmerman et al., 2004; Dovinova et al., 2008; Kamezaki et al., 2008) or combination of both SOD and NOS transgenes (Kung et al., 2008,) has positive influence on experimental hypertension. This protective effect is the end results of an increase in tissue level of NO and the decreases in oxidative stress (Chan et al., 2006) and peroxynitrite production (a cytotoxic molecule generated by reaction between superoxide and NO) (Kishi et al., 2004). The SOD genes are the first natural antioxidant defenses of an aerobic cellular system. The following subsection deals with gene therapies by individual SOD isoforms (alone or combined with other genes) and about their influence on the mechanisms of the cardiovascular disease.
The connection between the influence of angiotensin II (Ang II) and the increased superoxide production by activation of NAPDH oxidase has been observed in animal studies (Paravicini and Touyz, 2004; Zimmerman et al., 2004, Chan et al., 2005) and patients with cardiovascular complications (Yokoyama et al., 2000). Peripheral angiotensin II exerts potent effects on blood pressure and cardiovascular function through its actions on neurons located in specialized brain regions called the circumventricular organs, in particular the subfornical organ (SFO). Zimmerman et al., (2004) reported that following peripheral infusion of Ang II at initially subpressor doses, there was a gradually developing hypertension paralleled by an increase in superoxide production in the SFO. Using the adenoviral vectors for
The overexpression of cytoplasm-targeted superoxide dismutase via an adenoviral vector (AdSOD1) efficiently scavenges angiotensin-II–induced increases in intracellular superoxide, markedly attenuates the increase in [Ca2+]i and suggests a potential intracellular signaling mechanism involved in Ang II–mediated oxidant regulation of central neural control of blood pressure (Zimmerman et al., 2005).Genetically-altered mice and rats have been generated which overexpress SOD1. Compared with nontransgenic controls, mRNA for CuZn-SOD1 and SOD activity are increased several-fold in the vascular and non-vascular tissues, decreased vascular superoxide levels in atherosclerosis and diabetes to improve endothelial function and to protect in a model of fluid percussion injury that produces impairment of autoregulation (Faraci & Didion, 2004)
Downregulation of antioxidant gene expression and enzyme activity may underlie the augmented levels of superoxide and hydrogen peroxide in the RVLM, leading to oxidative stress and hypertension in the spontaneously hypertensive rats (SHR). A causative relationship between biochemical correlates of oxidative stress and neurological hypertension was established after a gene transfer by microinjection of adenovirus encoding SOD1 and MnSOD (also known as SOD2) or catalase (CAT) into brain (RVLM), which promoted a long-term reduction of blood pressure in SHR (Chan et al., 2006).
Mitochondrial dysfunction is a prominent feature of most cardiovascular diseases and hypertension and is associated with the deterioration of mitochondrial energy production in several organs such as the liver, the heart and the brain (Chan et al., 2009a, b). In the myocardium of the SHR, the evidence that points to the occurrence of mitochondrial dysfunction includes the decrease of cytochrome oxidase activity, ATP production, and inorganic phosphate translocator activity (de Cavanagh et al., 2006). Attenuated intracellular ATP content, results in a long-term maintenance of elevated blood pressure by increasing in sympathetic outflow, whereas augmented ROS production following mitochondrial dysfunction lowers the capacity of the NO-dependent vascular relaxation. The stationary elevated blood pressure in chronic arterial hypertension should be regarded as a compensatory response to decreased mitochondrial ATP synthesis
Mice lacking iNOS(-/-) exhibits extensive cytoplasmic swelling and degeneration of mitochondria, decrease in the resting indices of cardiac function as well as an impairment in the positive inotropic actions of isoproterenol following treatment with adriamycin compared to nTg mice. Cardiac troponin, creatine phosphokinase, and lactate dehydrogenase levels are significantly increased after adriamycin treatment in iNOS(-/-) mice However, when iNOS(-/-) mice are crossed with SOD2 overexpressing animals, mitochondrial injury is ameliorated to the level of the wild type (Cole, 2006). Mice completely deficient in Mn-SOD die within a few weeks after birth and exhibit a variety of phenotypes (depending on the genetic background) including neurodegeneration, cardiac abnormalities, and extensive mitochondrial damage (Faraci & Didion, 2004)
In Ang II-induced neurogenic hypertension or in SHR, mitochondrial electron transport capacity in the RVLM is reduced, accompanied by an increase in generation of mitochondrial superoxide and hydrogen peroxide (Chan et al., 2009a). Overexpression of SOD2 ameliorates mitochondrial oxidative stress and the induced antihypertension.
The degree of hypertrophy, ventricular dilatation, and myocardial fibrosis was markedly increased in mice lacking extracellular SOD (SOD3) and gene transfer of cDNA encoding membrane-bound SOD3 reduces vascular superoxide levels as well as arterial pressure in SHR (Chu et al., 2009). A deficiency in SOD3 does not alter the baseline blood pressure but increases the arterial pressure in models of hypertension that are greater in SOD3–deficient mice than in controls. Studies using overexpression strategies have revealed protective effects of SOD3 on blood vessels. Gene transfer of SOD3 reduced vascular superoxide levels during atherosclerosis in SHR. Effects of overexpression of SOD3 using this approach on endothelial function have varied (Faraci & Didion, 2004).
Depletion of NADPH oxidase subunits with small interfering RNAs - another approach in gene therapy - inhibits ROS production and, thus, has the potential to reduce blood pressure. Silencing of p22phox component of NADPH oxidase
Modulation of angiogenesis is of great importance from experimental, pathophysiological and especially clinical point of view. However, further research is needed to fully delineate the most effective way to target angiogenesis for treatment of cancer and cardiovascular diseases. The application of new approaches using bacteria for the transfer of therapeutic genes or the production of therapeutic protein or small RNAs has the potential to significantly advance cancer gene therapy. Recent studies indicate that treatments targeting a single molecule/pathway, even if it has pleiotropic effects, are unlikely to be completely effective; however, if the natural anti-tumor activity inherent to some anaerobic bacteria strains can be successfully combined with their ability to deliver agents targeting tumor angiogenesis, apoptosis or the immune system, this will represent a significant step toward reaching this important goal.
This chapter summarizes the preclinical and clinical studies and the use of animal models to provide evidence for potential benefit from angiogenic and antioxidant gene therapy. Gene therapy with the use of antioxidant genes may offer a promising approach for treatment of cancer and cardiovascular diseases in patients not suitable for conventional therapies.
However, one must realize that in animal models before the experimental data can be translated to clinical trials, shortcomings of antioxidant gene therapy, for example the limited duration of transgene expression, low efficacy of the transgene expression in the target organs or tissues, and potential immune responses to the transgenes, must be resolved. Specifically related to the use of antioxidant enzymes in gene therapy is the fact that reactive oxygen species not only mediate pathological events but are also required for normal cell signaling. This double-edged sword nature of the reactive oxygen species in regulation of cellular phenotypes under physiological and pathological conditions poses challenges to the application of gene therapy for early treatment of disease condition.
This work is supported by grant SAS-NSC JRP 2010/1, Slovakia and NSC100-2923-B075B-001-MY3 (JYHC) from the National Science Council, Taiwan.
There are many interventions in higher education that can be implemented through mobile games. Presenting these interventions using mobile applications is supported by the fact that 92% of higher education students own at least two mobile devices [1]. Further, characteristics of mobile technology are converging with well-known pedagogical principles as they simultaneously evolve to become more personalized, learner centered, and ubiquitous [2]. Research into mobile learning effectiveness shows positive results. Additionally, incorporating mobile devices into mathematics courses specifically leads to enhanced student perception of learning mathematics [3], which has been shown to be a stronger indicator of positive outcomes than previous academic success [4].
Traditionally, individuals needed to learn systems with unique languages, such as LaTeX or MathML, in order to produce readable mathematical content electronically. Further, text input on mobile devices is difficult and cumbersome [5] and students identify hindrances typing or entering answers on mobile devices [6]. For mobile games in mathematics and most other STEM courses, it is necessary to display and manipulate mathematical expressions and formulas. In mathematics, even entering a simple expression can require many more screen taps than one would expect which can lead to student frustration [7]. This is an issue that must be overcome as student perception of the ease of use and usefulness of mobile learning is correlated with the likelihood that they will use it in their coursework [8]. Particularly in mathematics, difficulties include display, manipulation and user input of mathematical expressions and use of symbolic methods to determine whether or not an answer is correct [9]. Complicating this further is the difficulty of balancing the limited interface with small screen size in order to provide a positive user experience [10].
Finally, there have been many concerns raised by educators and instructional designers that indicate the importance of focusing on curricular goals as the primary focus during the development of applications for mathematics education [11, 12]. Focusing on the curriculum means not only teaching the right content but teaching and displaying the content in the right way so that the knowledge students obtain from a mobile application translates into the classroom. One way this can be facilitated is by using a system that allows for the correct display, manipulation, and input of mathematical expressions and objects. While there are many computer-aided algebra systems available, many of these are either proprietary or require some method of coding the input to get the desired result making them difficult to embed in mobile applications or difficult for students to use [13].
To embed mathematics directly into mobile games, the authors have created a modular system that focuses on allowing students to easily, but freely, input expressions that are comparable with expressions in their textbooks while keeping the number of screen taps low. This software system incorporates simplicity and interactivity which have been identified as key contributors to overall usability in user interface design [10]. In addition, the system is implemented in two modules. The first is a set of classes that allow for symbolic manipulation. The second is a set of classes that aid in the manipulation and display of the expressions inside a game engine. By incorporating these classes in a game engine, other mobile applications developed in the same game engine can incorporate the work relatively easily. By keeping the symbolic classes separate, the system can be ported to a different game engine by only modifying the display classes.
The remainder of this chapter is organized as follows: Section 2 explores related work, Section 3 details the methods used to develop the system, Section 4 provides results from implementing the system in an educational STEM game, and Section 5 concludes the chapter and discusses recommendations for future work.
There are several examples of mobile applications that help students practice mathematical concepts up to calculus. While most of these are not games, reviewing them shows what has been accomplished in mobile mathematics display.
One example of a mobile application with practice problems in math including topics up to differential equations and multivariable calculus is Khan Academy [14]. Khan Academy is a free repository for content but has been adding questions to their website and mobile application. Another example is IXL Math [15]. This application, which requires a paid subscription, includes practice problems up to calculus. Additionally, there are numerous examples of mathematics in games for content at and below the level of basic algebra.
The previously mentioned applications tend to limit the keyboard input by problem type. If a problem does not require trigonometric functions, then these input keys will not be available. Recently, Nakamura and Nakahara developed an interface for mathematics input that limits the number of screen taps [7]. They accomplished this by opening a submenu when a key is touched. The user then flicks up, down, left or right to insert the corresponding symbol.
The only game to the best of our knowledge that incorporates math beyond algebra is a game previously developed by the authors to cover topics in precalculus [13]. This game employed external Python libraries to generate images of the expressions needed in the game. When this communication was done at run time, there was a noticeable delay between the function call and display of the expression. Additionally, interaction was limited because the expressions were generated as images and it is almost impossible to detect user interactions with mathematical symbols embedded in images. Finally, it was necessary to distribute the core components of a Python installation with the game which increased the package size, making mobile deployment infeasible. Generating the images in advance eliminated the delay and decreased the package size but removed the ability to randomly generate problems in real time.
The purpose for developing this software system is to create a solution that allows for display, symbolic computation, and answer entry for introductory, undergraduate STEM courses including first courses in calculus and physics. Typical introductory calculus problems include derivatives and integrals of various functions such as polynomial, rational, and trigonometric functions. By knowing the most prevalent types of functions, templates were created for the terms of each function type. The template functions can be added by the player and then modified to construct a complete answer to a problem. While this system does not address every problem type in undergraduate STEM courses, the methodology provides a flexible model that can handle a range of common problems. Additionally, the model can be extended by developers to cover additional problem types as needed.
The modular system developed has the following characteristics:
Using a consistent software design that supports both expression display and symbolic manipulation and comparison.
Controlling spacing and sizing to optimize both overall size, for readability, and relative size of expression components, for understandability.
Providing affordances to support natural user interaction. That is, displaying objects in the interface in a way that makes it clear how a user can interact with them.
For this system, a major goal was to provide a user experience that allowed for more variability in question answer formatting than multiple choice or matching. To accomplish this, it was necessary to develop a system that could display a problem, perform symbolic manipulations to automatically generate the correct answer, read in the user’s answer, and compare it to the correct answer.
Two parallel sets of classes were developed. Since the current mobile application was developed in Unity [16, 17], the classes handling the display needed to be closely linked to game objects and their properties. However, the classes handling the symbolic mathematics are only dependent on mathematics itself. Therefore, the symbolic math classes could be well separated from the display classes to facilitate reuse of the symbolic classes on different development platforms.
Since many operations in mathematics are binary operations, mathematical expressions can be represented as a binary expression tree (Figure 1a). Because the operations of multiplication and addition are both associative, limiting those operations to two children was not necessary. This restriction was eliminated to make checking of expressions easier by allowing more than two terms that are added or multiplied to be stored in a list (Figure 1b). There are two types of nodes. Internal nodes are operations while leaf nodes are single terms. To emulate this in code, a set of three abstract classes was developed (Figure 2). These three classes are intentionally kept very general. Abstract classes allow methods to be defined without implementation. Every MathObject can be simplified, differentiated, and integrated, but the process for each operation varies for different types of mathematical objects and therefore must be defined in the classes derived from MathObject. Therefore, the MathObject class only provides these common functions that are applicable to expressions and their individual terms. The MathTerm class assumes that each term has a lead coefficient, exponent, and argument coefficient and that there is some convention for sorting these terms which will assist with symbolic comparison of two expressions. The expression class assumes that an expression is a list of MathObjects (either Expressions or MathTerms) that will be associated by some binary mathematical operation.
(a) Traditional binary expression tree with equivalent mathematical expression. (b) Modified expression tree used in this work.
Class diagram for abstract MathObject class and two derived classes, which have derived classes that are not shown in this class diagram.
An example of a class deriving from MathTerm would be a TrigTerm. A generic trigonometric term can be written as follows:
In Eq. (1),
Using just those four variables, methods to simplify, differentiate, and integrate a TrigTerm can be defined. For example, the differentiate function has a switch statement in which each case is determined by the trigonometric function type. The result of the differentiate method is an expression that is equivalent to the derivative of the term. Other examples of classes deriving from the MathTerm class are polynomial, rational, logarithmic, exponential, and so on.
An example of a class that can be derived from the expression class is a sum class. This class includes methods for simplifying sums by combining terms that are considered like terms. Polymorphism is utilized to allow use of various methods to determine which terms are like based on the type of each term. Additionally, the class includes overloaded operators that allow addition and multiplication of two sums or a sum and an individual term. This allows the developer to use more common notation to combine expressions. Since many mathematical expressions are handled through individual MathTerm objects, the only other expression class required so far has been a product class. Of course, differences and quotients can be represented using sums and products, so these are naturally included.
In addition to being able to express longer equations by combining individual terms through sums (differences) and products (quotients), the next level of complexity would be composite functions, i.e., functions formed by substituting one function into another function. While these are not handled in the current implementation, they would be an easy extension. Once the actual function substitution is handled, derivatives can be expressed as a product using the chain rule. Since the chain rule is recursive, only a few additional functions would need to be defined to achieve a complete implementation for composite functions.
Once the issue of symbolic storage and manipulation is handled, the next step is to determine a way for the expressions to be displayed to the user in a manner that is consistent with textbook and handwritten notation. To preserve flexibility, a set of paired classes was designed for each class derived from MathTerm (Figure 3). This way if the code is ported to a different tool, the symbolic part can be easily reused. The symbolic classes could be reused directly while the display classes would need to be rewritten for the target game engine.
Class diagram showing symbolic and display class.
An abstract TermController class was designed to handle the connection between the symbolic MathTerm class and the rendered game object. The TermController assumes that each term is composed of a list of component game objects that each have an assigned type, such as coefficient, variable, exponent, parenthesis, and so on. Additionally, each term is a part of a list of MathTerms and has an operator that connects it to other elements in the list as well as a button to delete the term. Finally, the TermController contains a list of modifiable components. This is a subset of the list of component game objects and indicates which components can be modified by the player. When the term is used for player input, each of the item in this list can be modified. For example, operators can be changed from plus to minus or times. Additionally, coefficient values can be changed. When the term is fixed as part of a problem statement, these objects are fixed as well and cannot be modified.
The TermController also provides virtual functions for updating the term values and controlling the spacing for display. These functions should be overridden by each subclass to handle cases for each term type. Since each TermController is associated with a MathTerm of a given type, a generic class inheriting from the TermController class is used as a bridge between the abstract term controller class and the derived classes. Generic classes have one or more type parameters. The generic class inheriting from the abstract TermController class has a single type parameter that must be a derived class of MathTerm. For clarity, we will refer to this class as TermController<T>. This type parameter is used to declare the myTerm variable which indicates the MathTerm that is associated with the TermController. This also allows for additional methods that are required for all TermController objects regardless of the type of the associated MathTerm, such as setting whether the term can be modified and deleting the term.
Like the derived classes from the MathTerm class, derived classes of the TermController<T> class specified were developed for each function type to handle unique aspects of display associated with that function type. An example of one of these derived classes is TrigTermController which is associated with a TrigTerm by inheriting from TermController<TrigTerm>. This class has Text component variables for the lead coefficient, argument coefficient, and exponent and a DropDown component variable for the trigonometric function. These are modifiable components. Additionally, the TrigTermController class provides methods to control spacing within the term based on space available and methods for visually updating the modifiable components as well as updating the associated TrigTerm. Similar classes derived from the TermController<T> class have been developed for each class derived from MathTerm.
On mobile devices, screen size is limited and therefore sizing and positioning for maximum readability without losing information is important. In mathematical expressions, this has implications at two levels. At the individual term level, the sizing and placement of parts of the expression convey meaning. The simplest examples include exponents and fractions such as
Methods for screen space sizing and positioning make it easy to control the sizing of terms relative to each other and the sizing of their parts relative to term size. This means that it is easy to make a trigonometric term and a polynomial term the same size overall. However, that means that their corresponding parts will not be the same size. To address this, custom methods were developed at the TermController level as well as the overall expression level to ensure consistency.
At the individual term level, it was important to establish a consistent rule for the sizing relationship between components. A static dictionary was created at the TermController level to dictate the relative widths of coefficients, variables, exponents, and so on. Another static variable was created and used to set the aspect ratio of each character. The aspect ratio allowed for the height of any character to be calculated given its width, or vice versa. These values were manipulated by the developers to come up with constant values that resulted in the display and adaptive sizing being visually consistent with a textbook presentation.
To size components adaptively based on the space available, the width of a term was calculated by summing the theoretical widths of all its components, considering that numeric terms have more than one digit. This overall term width is used to calculate a standard unit of width by dividing the maximum space the term can occupy by the overall width. Next, the height of the term is calculated by dividing the width unit by the character aspect ratio. Finally, it is determined whether the width or height is the limiting factor and the entire term is scaled accordingly by redefining the width unit if necessary. All calculations are based in screen space and it is assumed that each term can occupy a box with a given width and height. This overall box will be sized to control the ratio of the size of this term to other terms in the expression.
Once all terms are sized individually, they need to be scaled relative to other terms in the same expression. To accomplish this, the width units for the controllers are compared to find the controller that is using the smallest width. This width is then used as the standard width to resize each term based on its overall length and the available space. As a result, each term is scaled by the ratio of the standard width for the entire expression divided by the width unit for the individual term. To control vertical position, the height of the term with the smallest height is used as the height unit for all terms. The result is an expression that scales to fill the available space as terms of different types are added and removed.
To keep the focus on the content being presented, interactions need to be intuitive and unencumbered. As previously mentioned, any input on a mobile device can frustrate the user if not well implemented. In the present case, this was handled by trading off between flexibility and ease of interaction. There are only certain parts of the terms and expressions that the user can modify. For example, in a polynomial term with a single variable such as
Another example of limiting flexibility to ease interactivity is in the use of predefined derived classes of MathTerm. This makes sense since mathematics instruction is usually broken down by function type. For example, it is common in calculus to learn polynomial differentiation and then move on to other function types. In the current implementation of the input system, the user is provided with buttons that allow them to add whole terms of a variety of types to their expressions. Then, they can tap various parts of the expression to modify their values. If we consider the entry of the term
The system developed has been implemented in a mobile game for calculus and physics. This game covers topics including derivatives, integrals, and function behavior. All problems are randomly generated at run time. In addition, the answer is determined and then compared to the user’s answer.
Figure 4 shows how a player would complete a problem asking them to find the derivative of a polynomial function. In Figure 4a, the initial problem is shown, and the user can use any of the three buttons to insert a polynomial, rational, or trigonometric term, respectively. In Figure 4b, the player has inserted two polynomial terms using the polynomial term button. Initially, the coefficients and exponents are not set to values and the player can tap to edit them. Finally, in Figure 4c, the player has entered the correct coefficients and exponents and tapped to change the middle operator to a minus. Once the player taps submit, their answer will be checked symbolically. They will be told whether they are correct and be shown the correct answer to the question.
Derivative problem showing (a) problem statement, (b) after player tapped to include a polynomial term, and (c) after player tapped to add additional term, change a sign and enter coefficients and exponents.
Figure 5 shows (a) an integration problem and (b) an example of how different types of terms scale together so that the sizing of all components is consistent. In Figure 5a, the player is asked to find the integral of an expression containing two polynomial terms. The player has entered two polynomial terms and a constant as their answer. The lead coefficient is converted from a whole number to a fraction by tapping and holding. Then the numerator and denominator can be manipulated individually.
More examples. (a) Integral question with fractional coefficients and (b) derivative question showing terms scaled as additional terms are added.
A system has been designed and developed that allows mathematical expressions to be embedded in mobile games. This system uses a consistent software design to support symbolic manipulation and display of expressions. This design facilitates reuse even if a different game engine is used by clearly separating the classes used for manipulation from those that implement display. Additionally, spacing and sizing of expression components are controlled to enhance readability and understanding. Finally, affordances are provided to support user interaction. Expressions are constructed by combining template terms and manipulating the components of those terms to provide balance between the desire for players to have the freedom to enter a variety of answers and the complexity, in both manipulation and user interaction, introduced by allowing answer entry to be truly freeform.
There are several directions that can be addressed in future work. First, additional classes can be developed to provide the ability to solve problems with different function types. Also, when the player is presented with a question, the question is on a separate panel which removes the player from game play. It would be better to incorporate the problems more diegetically and incorporate them directly into the scene of the game. Finally, additional affordances for interaction can be included that make interactions even more natural. For example, some players may not find it intuitive to tap and hold to convert a whole number to a fraction. It would be interesting to study this mode of interaction with alternatives, such as swiping up or down, to determine which is most intuitive and provides the best outcomes.
This work was made possible through the Office of Naval Research STEM under ONR GRANT11899718.
The authors declare no conflict of interest.
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Patil Medical College and Director, Centre for Advanced Medical Research (CAMR), BLDE (Deemed to be University), Vijayapur, Karnataka, India. Dr. Das did his M.S. and Ph.D. in Human Physiology from the University of Calcutta, Kolkata. His area of research is focused on understanding of molecular mechanisms of heavy metal activated low oxygen sensing pathways in vascular pathophysiology. He has invented a new method of estimation of serum vitamin E. His expertise in critical experimental protocols on vascular functions in experimental animals was well documented by his quality of publications. He was a Visiting Professor of Medicine at University of Leeds, United Kingdom (2014-2016) and Tulane University, New Orleans, USA (2017). For his immense contribution in medical research Ministry of Science and Technology, Government of India conferred him 'G.P. Chatterjee Memorial Research Prize-2019” and he is also the recipient of 'Dr.Raja Ramanna State Scientist Award 2015” by Government of Karnataka. He is a Fellow of the Royal Society of Biology (FRSB), London and Honorary Fellow of Karnataka Science and Technology Academy, Department of Science and Technology, Government of Karnataka.",institutionString:"BLDE (Deemed to be University), India",institution:null},{id:"243660",title:"Dr.",name:"Mallanagouda Shivanagouda",middleName:null,surname:"Biradar",slug:"mallanagouda-shivanagouda-biradar",fullName:"Mallanagouda Shivanagouda Biradar",position:null,profilePictureURL:"https://mts.intechopen.com/storage/users/243660/images/system/243660.jpeg",biography:"M. S. Biradar is Vice Chancellor and Professor of Medicine of\nBLDE (Deemed to be University), Vijayapura, Karnataka, India.\nHe obtained his MD with a gold medal in General Medicine and\nhas devoted himself to medical teaching, research, and administrations. He has also immensely contributed to medical research\non vascular medicine, which is reflected by his numerous publications including books and book chapters. Professor Biradar was\nalso Visiting Professor at Tulane University School of Medicine, New Orleans, USA.",institutionString:"BLDE (Deemed to be University)",institution:{name:"BLDE University",country:{name:"India"}}},{id:"289796",title:"Dr.",name:"Swastika",middleName:null,surname:"Das",slug:"swastika-das",fullName:"Swastika Das",position:null,profilePictureURL:"https://mts.intechopen.com/storage/users/289796/images/system/289796.jpeg",biography:"Swastika N. Das is Professor of Chemistry at the V. P. Dr. P. G.\nHalakatti College of Engineering and Technology, BLDE (Deemed\nto be University), Vijayapura, Karnataka, India. She obtained an\nMSc, MPhil, and PhD in Chemistry from Sambalpur University,\nOdisha, India. Her areas of research interest are medicinal chemistry, chemical kinetics, and free radical chemistry. She is a member\nof the investigators who invented a new modified method of estimation of serum vitamin E. She has authored numerous publications including book\nchapters and is a mentor of doctoral curriculum at her university.",institutionString:"BLDEA’s V.P.Dr.P.G.Halakatti College of Engineering & Technology",institution:{name:"BLDE University",country:{name:"India"}}},{id:"248459",title:"Dr.",name:"Akikazu",middleName:null,surname:"Takada",slug:"akikazu-takada",fullName:"Akikazu Takada",position:null,profilePictureURL:"https://mts.intechopen.com/storage/users/248459/images/system/248459.png",biography:"Akikazu Takada was born in Japan, 1935. After graduation from\nKeio University School of Medicine and finishing his post-graduate studies, he worked at Roswell Park Memorial Institute NY,\nUSA. He then took a professorship at Hamamatsu University\nSchool of Medicine. In thrombosis studies, he found the SK\npotentiator that enhances plasminogen activation by streptokinase. He is very much interested in simultaneous measurements\nof fatty acids, amino acids, and tryptophan degradation products. By using fatty\nacid analyses, he indicated that plasma levels of trans-fatty acids of old men were\nfar higher in the US than Japanese men. . He also showed that eicosapentaenoic acid\n(EPA) and docosahexaenoic acid (DHA) levels are higher, and arachidonic acid\nlevels are lower in Japanese than US people. By using simultaneous LC/MS analyses\nof plasma levels of tryptophan metabolites, he recently found that plasma levels of\nserotonin, kynurenine, or 5-HIAA were higher in patients of mono- and bipolar\ndepression, which are significantly different from observations reported before. In\nview of recent reports that plasma tryptophan metabolites are mainly produced by\nmicrobiota. He is now working on the relationships between microbiota and depression or autism.",institutionString:"Hamamatsu University School of Medicine",institution:{name:"Hamamatsu University School of Medicine",country:{name:"Japan"}}},{id:"137240",title:"Prof.",name:"Mohammed",middleName:null,surname:"Khalid",slug:"mohammed-khalid",fullName:"Mohammed Khalid",position:null,profilePictureURL:"https://mts.intechopen.com/storage/users/137240/images/system/137240.png",biography:"Mohammed Khalid received his B.S. degree in chemistry in 2000 and Ph.D. degree in physical chemistry in 2007 from the University of Khartoum, Sudan. He moved to School of Chemistry, Faculty of Science, University of Sydney, Australia in 2009 and joined Dr. Ron Clarke as a postdoctoral fellow where he worked on the interaction of ATP with the phosphoenzyme of the Na+/K+-ATPase and dual mechanisms of allosteric acceleration of the Na+/K+-ATPase by ATP; then he went back to Department of Chemistry, University of Khartoum as an assistant professor, and in 2014 he was promoted as an associate professor. In 2011, he joined the staff of Department of Chemistry at Taif University, Saudi Arabia, where he is currently an assistant professor. His research interests include the following: P-Type ATPase enzyme kinetics and mechanisms, kinetics and mechanisms of redox reactions, autocatalytic reactions, computational enzyme kinetics, allosteric acceleration of P-type ATPases by ATP, exploring of allosteric sites of ATPases, and interaction of ATP with ATPases located in cell membranes.",institutionString:"Taif University",institution:{name:"Taif University",country:{name:"Saudi Arabia"}}},{id:"63810",title:"Prof.",name:"Jorge",middleName:null,surname:"Morales-Montor",slug:"jorge-morales-montor",fullName:"Jorge Morales-Montor",position:null,profilePictureURL:"https://mts.intechopen.com/storage/users/63810/images/system/63810.png",biography:"Dr. Jorge Morales-Montor was recognized with the Lola and Igo Flisser PUIS Award for best graduate thesis at the national level in the field of parasitology. He received a fellowship from the Fogarty Foundation to perform postdoctoral research stay at the University of Georgia. He has 153 journal articles to his credit. He has also edited several books and published more than fifty-five book chapters. He is a member of the Mexican Academy of Sciences, Latin American Academy of Sciences, and the National Academy of Medicine. He has received more than thirty-five awards and has supervised numerous bachelor’s, master’s, and Ph.D. students. Dr. Morales-Montor is