\\n\\n
IntechOpen was founded by scientists, for scientists, in order to make book publishing accessible around the globe. Over the last two decades, this has driven Open Access (OA) book publishing whilst levelling the playing field for global academics. Through our innovative publishing model and the support of the research community, we have now published over 5,700 Open Access books and are visited online by over three million academics every month. These researchers are increasingly working in broad technology-based subjects, driving multidisciplinary academic endeavours into human health, environment, and technology.
\\n\\nBy listening to our community, and in order to serve these rapidly growing areas which lie at the core of IntechOpen's expertise, we are launching a portfolio of Open Science journals:
\\n\\nAll three journals will publish under an Open Access model and embrace Open Science policies to help support the changing needs of academics in these fast-moving research areas. There will be direct links to preprint servers and data repositories, allowing full reproducibility and rapid dissemination of published papers to help accelerate the pace of research. Each journal has renowned Editors in Chief who will work alongside a global Editorial Board, delivering robust single-blind peer review. Supported by our internal editorial teams, this will ensure our authors will receive a quick, user-friendly, and personalised publishing experience.
\\n\\n"By launching our journals portfolio we are introducing new, dedicated homes for interdisciplinary technology-focused researchers to publish their work, whilst embracing Open Science and creating a unique global home for academics to disseminate their work. We are taking a leap toward Open Science continuing and expanding our fundamental commitment to openly sharing scientific research across the world, making it available for the benefit of all." Dr. Sara Uhac, IntechOpen CEO
\\n\\n"Our aim is to promote and create better science for a better world by increasing access to information and the latest scientific developments to all scientists, innovators, entrepreneurs and students and give them the opportunity to learn, observe and contribute to knowledge creation. Open Science promotes a swifter path from research to innovation to produce new products and services." Alex Lazinica, IntechOpen founder
\\n\\nIn conclusion, Natalia Reinic Babic, Head of Journal Publishing and Open Science at IntechOpen adds:
\\n\\n“On behalf of the journal team I’d like to thank all our Editors in Chief, Editorial Boards, internal supporting teams, and our scientific community for their continuous support in making this portfolio a reality - we couldn’t have done it without you! With your support in place, we are confident these journals will become as impactful and successful as our book publishing program and bring us closer to a more open (science) future.”
\\n\\nWe invite you to visit the journals homepage and learn more about the journal’s Editorial Boards, scope and vision as all three journals are now open for submissions.
\\n\\nFeel free to share this news on social media and help us mark this memorable moment!
\\n\\n\\n"}]',published:!0,mainMedia:{caption:"",originalUrl:"/media/original/237"}},components:[{type:"htmlEditorComponent",content:'
After years of being acknowledged as the world's leading publisher of Open Access books, today, we are proud to announce we’ve successfully launched a portfolio of Open Science journals covering rapidly expanding areas of interdisciplinary research.
\n\n\n\nIntechOpen was founded by scientists, for scientists, in order to make book publishing accessible around the globe. Over the last two decades, this has driven Open Access (OA) book publishing whilst levelling the playing field for global academics. Through our innovative publishing model and the support of the research community, we have now published over 5,700 Open Access books and are visited online by over three million academics every month. These researchers are increasingly working in broad technology-based subjects, driving multidisciplinary academic endeavours into human health, environment, and technology.
\n\nBy listening to our community, and in order to serve these rapidly growing areas which lie at the core of IntechOpen's expertise, we are launching a portfolio of Open Science journals:
\n\nAll three journals will publish under an Open Access model and embrace Open Science policies to help support the changing needs of academics in these fast-moving research areas. There will be direct links to preprint servers and data repositories, allowing full reproducibility and rapid dissemination of published papers to help accelerate the pace of research. Each journal has renowned Editors in Chief who will work alongside a global Editorial Board, delivering robust single-blind peer review. Supported by our internal editorial teams, this will ensure our authors will receive a quick, user-friendly, and personalised publishing experience.
\n\n"By launching our journals portfolio we are introducing new, dedicated homes for interdisciplinary technology-focused researchers to publish their work, whilst embracing Open Science and creating a unique global home for academics to disseminate their work. We are taking a leap toward Open Science continuing and expanding our fundamental commitment to openly sharing scientific research across the world, making it available for the benefit of all." Dr. Sara Uhac, IntechOpen CEO
\n\n"Our aim is to promote and create better science for a better world by increasing access to information and the latest scientific developments to all scientists, innovators, entrepreneurs and students and give them the opportunity to learn, observe and contribute to knowledge creation. Open Science promotes a swifter path from research to innovation to produce new products and services." Alex Lazinica, IntechOpen founder
\n\nIn conclusion, Natalia Reinic Babic, Head of Journal Publishing and Open Science at IntechOpen adds:
\n\n“On behalf of the journal team I’d like to thank all our Editors in Chief, Editorial Boards, internal supporting teams, and our scientific community for their continuous support in making this portfolio a reality - we couldn’t have done it without you! With your support in place, we are confident these journals will become as impactful and successful as our book publishing program and bring us closer to a more open (science) future.”
\n\nWe invite you to visit the journals homepage and learn more about the journal’s Editorial Boards, scope and vision as all three journals are now open for submissions.
\n\nFeel free to share this news on social media and help us mark this memorable moment!
\n\n\n'}],latestNews:[{slug:"webinar-introduction-to-open-science-wednesday-18-may-1-pm-cest-20220518",title:"Webinar: Introduction to Open Science | Wednesday 18 May, 1 PM CEST"},{slug:"step-in-the-right-direction-intechopen-launches-a-portfolio-of-open-science-journals-20220414",title:"Step in the Right Direction: IntechOpen Launches a Portfolio of Open Science Journals"},{slug:"let-s-meet-at-london-book-fair-5-7-april-2022-olympia-london-20220321",title:"Let’s meet at London Book Fair, 5-7 April 2022, Olympia London"},{slug:"50-books-published-as-part-of-intechopen-and-knowledge-unlatched-ku-collaboration-20220316",title:"50 Books published as part of IntechOpen and Knowledge Unlatched (KU) Collaboration"},{slug:"intechopen-joins-the-united-nations-sustainable-development-goals-publishers-compact-20221702",title:"IntechOpen joins the United Nations Sustainable Development Goals Publishers Compact"},{slug:"intechopen-signs-exclusive-representation-agreement-with-lsr-libros-servicios-y-representaciones-s-a-de-c-v-20211123",title:"IntechOpen Signs Exclusive Representation Agreement with LSR Libros Servicios y Representaciones S.A. de C.V"},{slug:"intechopen-expands-partnership-with-research4life-20211110",title:"IntechOpen Expands Partnership with Research4Life"},{slug:"introducing-intechopen-book-series-a-new-publishing-format-for-oa-books-20210915",title:"Introducing IntechOpen Book Series - A New Publishing Format for OA Books"}]},book:{item:{type:"book",id:"6552",leadTitle:null,fullTitle:"Silver Nanoparticles - Fabrication, Characterization and Applications",title:"Silver Nanoparticles",subtitle:"Fabrication, Characterization and Applications",reviewType:"peer-reviewed",abstract:"Silver nanoparticles are the subject of immense interest because of their distinct chemical and physical properties that are different from their bulk counterpart. This makes these nanoparticles very important in many fields including antimicrobial applications, biosensor materials, composite fibers, cryogenic superconducting materials, cosmetic products, and electronic components. This book aims to provide in-depth study and analysis of various fabrication, characterization, and application techniques of silver nanoparticles that lead these nanoparticles very important in the recent technology. This book presents deep understanding of the new techniques from basic to the advanced level. This book addresses scientists, engineers, doctoral and postdoctoral fellows, and technical professionals working in specialized fields.",isbn:"978-1-78923-479-4",printIsbn:"978-1-78923-478-7",pdfIsbn:"978-1-83881-546-2",doi:"10.5772/intechopen.71247",price:119,priceEur:129,priceUsd:155,slug:"silver-nanoparticles-fabrication-characterization-and-applications",numberOfPages:288,isOpenForSubmission:!1,isInWos:1,isInBkci:!1,hash:"fa35924b88365602189440c335634a77",bookSignature:"Khan Maaz",publishedDate:"July 18th 2018",coverURL:"https://cdn.intechopen.com/books/images_new/6552.jpg",numberOfDownloads:29572,numberOfWosCitations:106,numberOfCrossrefCitations:86,numberOfCrossrefCitationsByBook:5,numberOfDimensionsCitations:157,numberOfDimensionsCitationsByBook:9,hasAltmetrics:1,numberOfTotalCitations:349,isAvailableForWebshopOrdering:!0,dateEndFirstStepPublish:"October 4th 2017",dateEndSecondStepPublish:"October 25th 2017",dateEndThirdStepPublish:"December 20th 2017",dateEndFourthStepPublish:"March 14th 2018",dateEndFifthStepPublish:"May 13th 2018",currentStepOfPublishingProcess:5,indexedIn:"1,2,3,4,5,6,7",editedByType:"Edited by",kuFlag:!1,featuredMarkup:null,editors:[{id:"107765",title:"Dr.",name:"Maaz",middleName:null,surname:"Khan",slug:"maaz-khan",fullName:"Maaz Khan",profilePictureURL:"https://mts.intechopen.com/storage/users/107765/images/system/107765.png",biography:"Dr. Maaz Khan is working as Deputy Chief Scientist (Professor) at PINSTECH, Pakistan. He has done Ph.D. and post doctorate in the field of Material Science (Nanoscience). His research interests include fabrication of nanomaterials and their structural, optical, magnetic, and electrical characterizations. He has authored more than 100 research articles and published 10 books. Presently, he is the Editor-in-Chief of ‘Journal of Materials, Processing and Design\\' and \\'The Nucleus\\'. He is also the Executive Editor of \\'International Journal of Nano Studies and Technology\\'. Dr. Maaz also serves as the editorial board member of several journals of Material Science.",institutionString:"Pakistan Institute of Nuclear Science and Technology",position:null,outsideEditionCount:0,totalCites:0,totalAuthoredChapters:"0",totalChapterViews:"0",totalEditedBooks:"9",institution:{name:"Pakistan Institute of Nuclear Science and Technology",institutionURL:null,country:{name:"Pakistan"}}}],equalEditorOne:null,equalEditorTwo:null,equalEditorThree:null,coeditorOne:null,coeditorTwo:null,coeditorThree:null,coeditorFour:null,coeditorFive:null,topics:[{id:"946",title:"Nanotechnology",slug:"metals-and-nonmetals-nanotechnology"}],chapters:[{id:"59905",title:"Synthesis of Silver Nanoparticles",doi:"10.5772/intechopen.75363",slug:"synthesis-of-silver-nanoparticles",totalDownloads:6773,totalCrossrefCites:9,totalDimensionsCites:18,hasAltmetrics:1,abstract:"Nanoparticles of noble metals, especially the silver nanoparticles, have been widely used in different fields of science. Their unique properties, which can be incorporated into biosensor materials, composite fibers, cosmetic products, antimicrobial applications, conducting materials and electronic components, make them a very important subject to be studied by chemistry, biology, healthcare, electronic and other related branches. These unique properties depend upon size and shape of the silver nanoparticles. Different preparation methods have been reported for the synthesis of the silver nanoparticles, such as electron irradiation, laser ablation, chemical reduction, biological artificial methods, photochemical methods and microwave processing. This chapter aims to inform the synthesis methods of the silver nanoparticles.",signatures:"Remziye Güzel and Gülbahar Erdal",downloadPdfUrl:"/chapter/pdf-download/59905",previewPdfUrl:"/chapter/pdf-preview/59905",authors:[{id:"226613",title:"Dr.",name:"Remziye",surname:"Güzel",slug:"remziye-guzel",fullName:"Remziye Güzel"},{id:"240772",title:"MSc.",name:"Gülbahar",surname:"Erdal",slug:"gulbahar-erdal",fullName:"Gülbahar Erdal"}],corrections:null},{id:"61218",title:"Silver Nanoparticles: Synthesis, Characterization and Applications",doi:"10.5772/intechopen.75611",slug:"silver-nanoparticles-synthesis-characterization-and-applications",totalDownloads:5237,totalCrossrefCites:26,totalDimensionsCites:55,hasAltmetrics:1,abstract:"Day by day augmenting importance of metal nanoparticles in the versatile fields like, catalyst, electronic, magnetic, mechanic, optical optoelectronic, materials for solar cell and fuel cell, medical, bioimaging, cosmetic, ultrafast data communication and optical data storage, etc, is increasing their value. Nanoparticles of alkali metals and noble metals (copper, silver, platinum, palladium, and gold, etc.) have a broad absorption band in the visible region of the electromagnetic spectrum of light, because the solutions of these metal nanoparticles show the intense color, which is absent in their bulk counterparts as well as their atomic level. The main cause behind this phenomenon is attributed to the collective oscillations of the free conductive electrons that are induced by an interaction with electromagnetic field. The whole incidence is known as localized surface plasmonic resonance. Out of these, we have selected the silver nanoparticles for the studies. In this article, we will discuss the synthesis, characterization, and application of the silver nanoparticles. Future prospective and challenges in the field commercialization of the nanosilver is also discussed.",signatures:"Neelu Chouhan",downloadPdfUrl:"/chapter/pdf-download/61218",previewPdfUrl:"/chapter/pdf-preview/61218",authors:[{id:"208475",title:"Associate Prof.",name:"Neelu",surname:"Chouhan",slug:"neelu-chouhan",fullName:"Neelu Chouhan"}],corrections:null},{id:"61044",title:"Synthesis and Optical Properties of Highly Stabilized Peptide- Coated Silver Nanoparticles",doi:"10.5772/intechopen.76829",slug:"synthesis-and-optical-properties-of-highly-stabilized-peptide-coated-silver-nanoparticles",totalDownloads:1247,totalCrossrefCites:0,totalDimensionsCites:1,hasAltmetrics:0,abstract:"The interaction between the silver nanoparticle and peptide surfaces has been of increased interest for the applications of bionanotechnology and tissue engineering. In order to completely understand such interactions, we have examined the optical properties of peptide-coated silver nanoparticles. However, the effect of peptide binding motif upon the silver nanoparticles surface characteristics and physicochemical properties of these nanoparticles remains incompletely understood. Here, we have fabricated sodium citrate stabilized silver nanoparticles and coated with peptide IVD (ID3). The optical properties of these peptide-capped nanomaterials were characterized by UV-visible, transmission electron microscopy (TEM), and z-potential measurement. The results indicate that the interface of silver nanoparticles (AgNP)-peptide is generated using ID3 peptide and suggested that the reactivity of peptide is governed by the conformation of the bound peptide on the silver nanoparticle surface. The interactions of peptide-nanoparticle would potentially be used to fabricate specific functionality into the various peptide-capped nanomaterials and antibacterial applications.",signatures:"Parvathalu Kalakonda and Sreenivas Banne",downloadPdfUrl:"/chapter/pdf-download/61044",previewPdfUrl:"/chapter/pdf-preview/61044",authors:[{id:"205966",title:"Dr.",name:"Parvathalu",surname:"Kalakonda",slug:"parvathalu-kalakonda",fullName:"Parvathalu Kalakonda"}],corrections:null},{id:"60180",title:"Synthesis, Characterization and Antimicrobial Properties of Silver Nanocomposites",doi:"10.5772/intechopen.74623",slug:"synthesis-characterization-and-antimicrobial-properties-of-silver-nanocomposites",totalDownloads:1897,totalCrossrefCites:4,totalDimensionsCites:7,hasAltmetrics:0,abstract:"Nanoparticles and polymers in their respective fields have contributed greatly in the form of science and hence in daily life application products. But due to lack in emerging technologies for developing silver nanocomposites with polymers and other materials, the nanoparticle-based products have conquered little less attention. Hereby, an effort is made to put a light on already developed functional materials containing silver nanoparticles and also to look forward their scope in daily life applications. A little more insight into antimicrobial properties of such materials will also be elaborated. Finally, the optimal amounts of silver that cannot be health hazardous to living being especially human and overall environmental impacts of Nanocomposites are presented.",signatures:"Mudassar Abbas, Nida Naeem, Hina Iftikhar and Usman Latif",downloadPdfUrl:"/chapter/pdf-download/60180",previewPdfUrl:"/chapter/pdf-preview/60180",authors:[{id:"225082",title:"Associate Prof.",name:"Mudassar",surname:"Abbas",slug:"mudassar-abbas",fullName:"Mudassar Abbas"},{id:"240184",title:"Ms.",name:"Nida",surname:"Naeem",slug:"nida-naeem",fullName:"Nida Naeem"},{id:"240185",title:"Ms.",name:"Hina",surname:"Iftikhar",slug:"hina-iftikhar",fullName:"Hina Iftikhar"},{id:"240186",title:"Dr.",name:"Usman",surname:"Latif",slug:"usman-latif",fullName:"Usman Latif"}],corrections:null},{id:"59848",title:"Application of Silver Nanoparticles for Water Treatment",doi:"10.5772/intechopen.74675",slug:"application-of-silver-nanoparticles-for-water-treatment",totalDownloads:2219,totalCrossrefCites:2,totalDimensionsCites:7,hasAltmetrics:0,abstract:"In recent past development of silver nanoparticles and their application in the treatment of wastewaters is becoming a major area of research. It is mainly applicable to the removal of three major pollutants like pesticides, heavy metals, and microorganisms. Variety of synthesis techniques have been reported for preparation and characterization of silver nanoparticles. In our research, we synthesized Ag nanoparticles supported on ZrO2 and ZrO2-CeO2 by a “deposit-precipitation method” as the first step and later sequentially synthesized Ag-Au supported on ZrO2 and ZrO2-CeO2 by Redox method. Catalysts were evaluated in catalytic wet air oxidation (CWAO) of methyl tert-butyl ether and phenol. The CWAO is a liquid phase process for the treatment of organic pollutants operating at temperatures in the range of 100–325°C at 5–200 bar pressures. The selectivity and efficient of catalysts were evaluated by total organic carbon (TOC) and high-performance liquid chromatograph (HPLC). Ideally, the total mineralization of pollutants into CO2 and H2O is preferred.",signatures:"Zenaida Guerra Que, José Gilberto Torres Torres, Hermicenda Pérez\nVidal, María A. Lunagómez Rocha, Juan C. Arévalo Pérez, Ignacio\nCuauhtémoc López, Durvel De La Cruz Romero, Alejandra\nE. Espinosa De Los Monteros Reyna, José G. Pacheco Sosa, Adib A.\nSilahua Pavón and Jorge S. Ferráez Hernández",downloadPdfUrl:"/chapter/pdf-download/59848",previewPdfUrl:"/chapter/pdf-preview/59848",authors:[{id:"228497",title:"Dr.",name:"Hermicenda",surname:"Perez Vidal",slug:"hermicenda-perez-vidal",fullName:"Hermicenda Perez Vidal"},{id:"229146",title:"Dr.",name:"Zenaida",surname:"Guerra Que",slug:"zenaida-guerra-que",fullName:"Zenaida Guerra Que"},{id:"240565",title:"Dr.",name:"Jose Gilberto",surname:"Torres Torres",slug:"jose-gilberto-torres-torres",fullName:"Jose Gilberto Torres Torres"},{id:"240661",title:"Dr.",name:"María A.",surname:"Lunagómez Rocha",slug:"maria-a.-lunagomez-rocha",fullName:"María A. Lunagómez Rocha"},{id:"240662",title:"MSc.",name:"Juan C.",surname:"Arévalo Pérez",slug:"juan-c.-arevalo-perez",fullName:"Juan C. Arévalo Pérez"},{id:"240663",title:"Dr.",name:"Ignacio",surname:"Cuauhtémoc López",slug:"ignacio-cuauhtemoc-lopez",fullName:"Ignacio Cuauhtémoc López"},{id:"240664",title:"Dr.",name:"Alejandra E.",surname:"Espinosa De Los Monteros Reyna",slug:"alejandra-e.-espinosa-de-los-monteros-reyna",fullName:"Alejandra E. Espinosa De Los Monteros Reyna"},{id:"240665",title:"Dr.",name:"Durvel",surname:"De La Cruz Romero",slug:"durvel-de-la-cruz-romero",fullName:"Durvel De La Cruz Romero"},{id:"240666",title:"Dr.",name:"José G.",surname:"Pacheco Sosa",slug:"jose-g.-pacheco-sosa",fullName:"José G. Pacheco Sosa"},{id:"240667",title:"MSc.",name:"Adib A.",surname:"Silahua Pavón",slug:"adib-a.-silahua-pavon",fullName:"Adib A. Silahua Pavón"},{id:"240668",title:"MSc.",name:"Jorge S.",surname:"Ferráez Hernández",slug:"jorge-s.-ferraez-hernandez",fullName:"Jorge S. Ferráez Hernández"}],corrections:null},{id:"60717",title:"Antibacterial Effect of Silver Nanoparticles Versus Chlorhexidine Against Streptococcus mutans and Lactobacillus casei",doi:"10.5772/intechopen.76183",slug:"antibacterial-effect-of-silver-nanoparticles-versus-chlorhexidine-against-streptococcus-mutans-and-l",totalDownloads:1157,totalCrossrefCites:3,totalDimensionsCites:3,hasAltmetrics:0,abstract:"The porpoise of the study was to evaluate the antibacterial effect of silver nanoparticles (Ag-NPs) versus chlorhexidine (CHX) against Streptococcus mutans and Lactobacillus casei. Three different reducing agents were used for the synthesis and characterization of Ag-NPs: sodium borohydride (NaBH4), a chemical method, and Heterotheca inuloides (Hi) and Camellia sinensis (Cs), two eco-friendly methods. The synthesized substance was deposited on deciduous teeth. Its behavior in dental tissues was evaluated through an energy dispersive X-ray spectroscopy (EDS) analysis, using a scanning electron microscope (SEM). The characterization of Ag-NPs in terms of shape, size, and polydispersity was performed through spectrophotometry of ultraviolet-visible light analysis (UV-vis), as well as by transmission electron microscopy. Isolation and culture of strains S. mutans and L. casei were done to perform the microbiological analysis.",signatures:"Raul Alberto Morales Luckie, Rafael Lopez Casatañares, Rogelio\nSchougall, Sarai Carmina Guadarrama Reyes and Víctor Sanchez\nMendieta",downloadPdfUrl:"/chapter/pdf-download/60717",previewPdfUrl:"/chapter/pdf-preview/60717",authors:[{id:"226386",title:"Dr.",name:"Raul Alberto",surname:"Morales Luckie",slug:"raul-alberto-morales-luckie",fullName:"Raul Alberto Morales Luckie"},{id:"228578",title:"Dr.",name:"Víctor",surname:"Sanchez Mendieta",slug:"victor-sanchez-mendieta",fullName:"Víctor Sanchez Mendieta"},{id:"228580",title:"MSc.",name:"Sarai Carmina",surname:"Guadarrama Reyes",slug:"sarai-carmina-guadarrama-reyes",fullName:"Sarai Carmina Guadarrama Reyes"},{id:"228581",title:"Dr.",name:"Rogelio",surname:"Schougall",slug:"rogelio-schougall",fullName:"Rogelio Schougall"},{id:"228584",title:"Dr.",name:"Rafael",surname:"Lopez Casatañares",slug:"rafael-lopez-casatanares",fullName:"Rafael Lopez Casatañares"}],corrections:null},{id:"61686",title:"Biological Activity of Silver Nanoparticles and Their Applications in Anticancer Therapy",doi:"10.5772/intechopen.77075",slug:"biological-activity-of-silver-nanoparticles-and-their-applications-in-anticancer-therapy",totalDownloads:1707,totalCrossrefCites:14,totalDimensionsCites:21,hasAltmetrics:0,abstract:"Nanotechnology delivers materials and nanoparticles (NPs) with high biological potential, useful in bioengineering, nanomedicine, and human health protection. Silver nanoparticles (NPs), because of their wide spectrum of activities and physical and chemical properties, are nowadays extensively researched. However, careful studies on living organism should be performed, with strong attention to biocompatibility. Multiple cellular effects, displayed after AgNP treatments, show interesting potential of metal-based NPs, not only in bio-nanotechnology but also in molecular medicine and anticancer therapy. AgNPs are promising anticancer agents, influencing the cell cycle, inhibiting cancer proliferation, and inducing oxidative stress and propagation of programmed cellular death (apoptosis). Additionally, they protect against bacterial, fungal, and viral infections. During chemo- and radio-therapies, such antimicrobial protection will be desirable because of the decreased immunological resistance of cancer patients. In conclusion, AgNPs often present in the human environment should be studied for novel findings and better characteristic. This article discusses advantages of AgNP’s “eco-friendly” production, followed by green synthesis, with particular consideration of antimicrobial and anticancer properties. Cellular processes, induced after AgNP treatments, are focused on antiproliferative, pro-oxidative, and pro-apoptotic activities of NPs.",signatures:"Magdalena Skonieczna and Dorota Hudy",downloadPdfUrl:"/chapter/pdf-download/61686",previewPdfUrl:"/chapter/pdf-preview/61686",authors:[{id:"243029",title:"Associate Prof.",name:"Magdalena",surname:"Skonieczna",slug:"magdalena-skonieczna",fullName:"Magdalena Skonieczna"},{id:"249509",title:"MSc.",name:"Dorota",surname:"Hudy",slug:"dorota-hudy",fullName:"Dorota Hudy"}],corrections:null},{id:"59446",title:"Silver Nanoparticles and PDMS Hybrid Nanostructure for Medical Applications",doi:"10.5772/intechopen.74372",slug:"silver-nanoparticles-and-pdms-hybrid-nanostructure-for-medical-applications",totalDownloads:1449,totalCrossrefCites:1,totalDimensionsCites:2,hasAltmetrics:0,abstract:"For many years, people have known about silver’s antibacterial qualities. Silver nanoparticles are widely used in consumer products, biomedical equipment, textile products and in other applications. Having a larger surface area to coat or spread over another surface, offers a greater contact area, therefore, increases antimicrobial properties. Also, these nanoparticles can be incorporated into polydimethylsiloxane (PDMS) implants as immobilized or occluded particles to improve their performance in the body. PDMS is commonly used for biomedical applications, including components for microfluidics, catheters, implants, valves, punctual plugs, orthopedics and micro gaskets. It can be manufactured easily in different forms such as fibers, fabrics, films, blocks and porous surfaces. The use of silver nanoparticles for their antimicrobial qualities improves PDMS biocompatibility, because it inhibits microbial growth, thereby making it more attractive for biomedical applications. The presence of metal nanoparticles also helps to reduce the hydrophobic nature of PDMS. This property of PDMS does not encourage cell adhesion, which is a very critical requirement for medical implants. Silver nanoparticles improve the silicone’s wettability. The exceptional properties of silver nanoparticles combined with the PDMS have made this hybrid nanostructure applicable to different medical uses.",signatures:"Solano-Umaña Victor and Vega-Baudrit José Roberto",downloadPdfUrl:"/chapter/pdf-download/59446",previewPdfUrl:"/chapter/pdf-preview/59446",authors:[{id:"224271",title:"Prof.",name:"Jose",surname:"Vega Baudrit",slug:"jose-vega-baudrit",fullName:"Jose Vega Baudrit"}],corrections:null},{id:"61862",title:"Exploring the Effect of Operational Factors and Characterization Imperative to the Synthesis of Silver Nanoparticles",doi:"10.5772/intechopen.76947",slug:"exploring-the-effect-of-operational-factors-and-characterization-imperative-to-the-synthesis-of-silv",totalDownloads:1523,totalCrossrefCites:9,totalDimensionsCites:9,hasAltmetrics:0,abstract:"The synthesis and application of silver nanoparticles are increasingly becoming attractive. Hence, a critical examination of the various factors needed for the synthesis of silver nanoparticles as well as the characterization is imperative. In light of this, we addressed in this chapter, the nitty-gritty on the operational parameters (factors) and characterization relevant to synthesis of silver nanoparticle. The following characterization protocols were discussed in the context of silver nanoparticle synthesis. These protocols include spectroscopic techniques such as ultraviolet visible spectroscopy (UV–Vis), Fourier transform infrared spectroscopy (FTIR), scanning electron microscopy (SEM), transmission electron microscopy (TEM), energy-dispersive X-ray spectroscopy (EDX), X-ray fluorescence (XRF), X-ray diffraction (XRD), thermogravimetric analysis (TGA) and X-ray photoelectron spectroscopy (XPS).",signatures:"Adewumi O. Dada, Folahan A. Adekola, Oluyomi S. Adeyemi,\nOluwasesan M. Bello, Adetunji C. Oluwaseun, Oluwakemi J.\nAwakan and Femi-Adepoju A. Grace",downloadPdfUrl:"/chapter/pdf-download/61862",previewPdfUrl:"/chapter/pdf-preview/61862",authors:[{id:"34132",title:"Dr.",name:"Folahan",surname:"A. Adekola",slug:"folahan-a.-adekola",fullName:"Folahan A. Adekola"},{id:"65667",title:"Dr.",name:"Oluyomi",surname:"Adeyemi",slug:"oluyomi-adeyemi",fullName:"Oluyomi Adeyemi"},{id:"208501",title:"Dr.",name:"Adewumi",surname:"Dada",slug:"adewumi-dada",fullName:"Adewumi Dada"},{id:"222614",title:"Dr.",name:"Charles",surname:"Adetunji",slug:"charles-adetunji",fullName:"Charles Adetunji"},{id:"240641",title:"Dr.",name:"Oluwasesan Micheal",surname:"Bello",slug:"oluwasesan-micheal-bello",fullName:"Oluwasesan Micheal Bello"},{id:"241975",title:"Dr.",name:"Oluwakemi Josephine",surname:"Awakan",slug:"oluwakemi-josephine-awakan",fullName:"Oluwakemi Josephine Awakan"},{id:"246421",title:"Dr.",name:"Abiola Grace",surname:"Femi-Adepoju",slug:"abiola-grace-femi-adepoju",fullName:"Abiola Grace Femi-Adepoju"}],corrections:null},{id:"60486",title:"Assessment of Nano-toxicity and Safety Profiles of Silver Nanoparticles",doi:"10.5772/intechopen.75645",slug:"assessment-of-nano-toxicity-and-safety-profiles-of-silver-nanoparticles",totalDownloads:1760,totalCrossrefCites:7,totalDimensionsCites:16,hasAltmetrics:0,abstract:"Nanotoxicology, which is related with toxic potentials of nanoparticles (NPs) and their adverse effects on living organisms and environment, is a sub-branch of toxicology discipline. Nano-toxicity of NPs depends on their doses, unique chemical, and physical properties. Nowadays, silver (Ag) NPs are used in many consumer and scientific applications such as antimicrobial and pharmaceutical applications, water purification systems, textile industry, and food packaging processes. However, the information that about their nano-toxic potentials is still not complete, and it is considered that several parameters of Ag NPs such as size, shape, surface, and stability affect the toxic potential in different ways. Nano-toxic potentials of Ag NPs were mentioned as in vivo, in vitro, and in silico the studies. In this chapter, it was evaluated the common unique properties of NPs are related with nanotoxicology such as size, surface area and modifications, shape, agglomeration status, and dose.",signatures:"Yasemin Budama-Kilinc, Rabia Cakir-Koc, Tolga Zorlu, Burak\nOzdemir, Zeynep Karavelioglu, Abdurrahim Can Egil and Serda\nKecel-Gunduz",downloadPdfUrl:"/chapter/pdf-download/60486",previewPdfUrl:"/chapter/pdf-preview/60486",authors:[{id:"146042",title:"MSc.",name:"Rabia",surname:"Cakir Koc",slug:"rabia-cakir-koc",fullName:"Rabia Cakir Koc"},{id:"182570",title:"Dr.",name:"Yasemin",surname:"Budama Kilinc",slug:"yasemin-budama-kilinc",fullName:"Yasemin Budama Kilinc"},{id:"239962",title:"MSc.",name:"Burak",surname:"Özdemir",slug:"burak-ozdemir",fullName:"Burak Özdemir"},{id:"241550",title:"Dr.",name:"Tolga",surname:"Zorlu",slug:"tolga-zorlu",fullName:"Tolga Zorlu"},{id:"241551",title:"MSc.",name:"Zeynep",surname:"Karavelioglu",slug:"zeynep-karavelioglu",fullName:"Zeynep Karavelioglu"},{id:"241552",title:"BSc.",name:"A. Can",surname:"Egil",slug:"a.-can-egil",fullName:"A. Can Egil"},{id:"241998",title:"Associate Prof.",name:"Serda",surname:"Kecel-Gunduz",slug:"serda-kecel-gunduz",fullName:"Serda Kecel-Gunduz"}],corrections:null},{id:"61345",title:"Use of Silver Nanoparticles as Tougheners of Alumina Ceramics",doi:"10.5772/intechopen.76949",slug:"use-of-silver-nanoparticles-as-tougheners-of-alumina-ceramics",totalDownloads:863,totalCrossrefCites:0,totalDimensionsCites:0,hasAltmetrics:0,abstract:"In this work, alumina/silver composites were produced through powder techniques, which involve the combination of high energy mechanical milling combined with sintering in the presence of a liquid phase and with the idea of having ceramics with good toughness values. From mechanical characterizations, it was found that increases of the silver content in the alumina origins decrease the elastic’s modulus and flexural strength of the final composite. The fracture toughness of alumina increases from 4.2 MPam−0.5 for monolithic alumina to 10 MPam−0.5 for alumina with 2 wt% silver additions. It was determined that the reinforcement mechanism of these materials is due to the deflection of cracks owing to metallic bridges formed by the silver used as toughener material.",signatures:"Enrique Rocha-Rangel, Azucena Pérez-de la Fuente, José A.\nRodríguez-García, Eddie N. Armendáriz-Mireles and Carlos A.\nCalles-Arriaga",downloadPdfUrl:"/chapter/pdf-download/61345",previewPdfUrl:"/chapter/pdf-preview/61345",authors:[{id:"30489",title:"Dr.",name:"Enrique",surname:"Rocha",slug:"enrique-rocha",fullName:"Enrique Rocha"}],corrections:null},{id:"60328",title:"Modification of Electrical Properties of Silver Nanoparticle",doi:"10.5772/intechopen.75682",slug:"modification-of-electrical-properties-of-silver-nanoparticle",totalDownloads:1497,totalCrossrefCites:10,totalDimensionsCites:16,hasAltmetrics:0,abstract:"This chapter focuses on the synthesis of silver nanoparticles (AgNPs), AgNP composites, and its role in the structure and electrical properties modification. The research and its various applications of nanoparticles are interesting among others. Silver nanoparticles (AgNPs) are now becoming to take an essential role in the diverse field of application. Establishing the simple and inexpensive of AgNPs is greatly required, since it will also influence it used. Many different methods to obtain AgNPs have been reported. The inducing AgNPs on a various number of other materials has been investigating. We report a brief review of simple AgNP fabrication method at different MSA, PEG, and ultrasonic irradiations regarding its structure and conductivity. We also report the influence of AgNPs on the electrical conductivity of conducting polymers, i.e., PANI, flavonoids of Jatropha multifida L. (JML) and Pterocarpus indicus W. (PIW). It is found that in general, the increase of AgNP concentration gives rise to increase of its electrical conductivity. The conductivity of the AgNPs doped of polymers does not directly reflect by its crystallinity or crystal size. Some exciting aspect of crystal structure and its conductivity are discussed.",signatures:"Markus Diantoro, Thathit Suprayogi, Ulwiyatus Sa’adah, Nandang\nMufti, Abdulloh Fuad, Arif Hidayat and Hadi Nur",downloadPdfUrl:"/chapter/pdf-download/60328",previewPdfUrl:"/chapter/pdf-preview/60328",authors:[{id:"230167",title:"Dr.",name:"Markus",surname:"Diantoro",slug:"markus-diantoro",fullName:"Markus Diantoro"},{id:"240354",title:"MSc.",name:"Abdulloh",surname:"Fuad",slug:"abdulloh-fuad",fullName:"Abdulloh Fuad"},{id:"240355",title:"Dr.",name:"Nandang",surname:"Mufti",slug:"nandang-mufti",fullName:"Nandang Mufti"},{id:"240356",title:"Prof.",name:"Arif",surname:"Hidayat",slug:"arif-hidayat",fullName:"Arif Hidayat"},{id:"240357",title:"Prof.",name:"Hadi",surname:"Nur",slug:"hadi-nur",fullName:"Hadi Nur"}],corrections:null},{id:"59980",title:"Antimicrobial Effect of Silk and Catgut Suture Threads Coated with Biogenic Silver Nanoparticles",doi:"10.5772/intechopen.75074",slug:"antimicrobial-effect-of-silk-and-catgut-suture-threads-coated-with-biogenic-silver-nanoparticles",totalDownloads:1178,totalCrossrefCites:1,totalDimensionsCites:1,hasAltmetrics:0,abstract:"Two bionanocomposites based on suture threads, silk-silver nanoparticles (Ag NPs) and catgut-Ag NPs, were prepared through a green chemistry methodology using Chenopodium ambrosioides (Mexican Epazote) as reducing agent. UV-Vis spectrophotometry (UV-Vis), Scanning Electron Microscopy (SEM) and Transmission Electron Microscopy (TEM), were used for their characterization. UV-Vis confirmed the synthesis of silver nanoparticles. Micrographs showed polydisperse, mostly spherical, Ag NPs attached to both suture threads. The bionanocomposites antimicrobial properties were evaluated through cultures and inhibition zones tests. The Chenopodium ambrosioides-assisted synthesized bionanocomposites have proved antibacterial effect against S. aureus and E. coli in both sutures (silk and catgut) and could be potentially useful for oral or periodontal surgery. There was no significant difference statistically in inhibition of Staphylococcus aureus versus Escherichia coli.",signatures:"Saraí C. Guadarrama-Reyes, Rogelio J. Scougall-Vilchis, Raúl A.\nMorales-Luckie, Víctor Sánchez-Mendieta and Rafael López-\nCastañares",downloadPdfUrl:"/chapter/pdf-download/59980",previewPdfUrl:"/chapter/pdf-preview/59980",authors:[{id:"226386",title:"Dr.",name:"Raul Alberto",surname:"Morales Luckie",slug:"raul-alberto-morales-luckie",fullName:"Raul Alberto Morales Luckie"},{id:"228578",title:"Dr.",name:"Víctor",surname:"Sanchez Mendieta",slug:"victor-sanchez-mendieta",fullName:"Víctor Sanchez Mendieta"},{id:"228584",title:"Dr.",name:"Rafael",surname:"Lopez Casatañares",slug:"rafael-lopez-casatanares",fullName:"Rafael Lopez Casatañares"},{id:"240222",title:"Mrs.",name:"Sarai C",surname:"Guadarrama-Reyes",slug:"sarai-c-guadarrama-reyes",fullName:"Sarai C Guadarrama-Reyes"},{id:"240223",title:"Dr.",name:"Rogelio J",surname:"Scougall-Vilchis",slug:"rogelio-j-scougall-vilchis",fullName:"Rogelio J Scougall-Vilchis"}],corrections:null},{id:"59355",title:"Electrochemical Formation of Silver Nanoparticles and Nanoclusters on Multiwall Carbon Nanotube Electrode Films",doi:"10.5772/intechopen.74056",slug:"electrochemical-formation-of-silver-nanoparticles-and-nanoclusters-on-multiwall-carbon-nanotube-elec",totalDownloads:1072,totalCrossrefCites:0,totalDimensionsCites:1,hasAltmetrics:0,abstract:"The Ag nanoparticles and nanoclusters (AgNP, AgNC) have been widely used due to their multiple applications, for example, in catalysts for CO2 to CO electrochemical reduction, O2 reduction in fuel cells, interface design for plasmonic resonance experiments and H2O2 or glucose sensors. The chemical methods most used to obtain AgNP, reported in the literature are: borohydride reduction, the Tollens method or the sonication at high concentrations of AgNO3. One important disadvantage of these methods is the multiple steps required for electrode design, especially in carbon materials, and one of them is MWCNTs, used in some applications mentioned above. Electrodeposition has been reported in the preparation of metallic particles. In this chapter, we described the electropolishing method in the preparation of AgNP and AgNC supported on MWCNT film. An advantage of this proposed method is that it allows obtaining AgNP and AgNC in situ, supported on carbon matrices, ready to use as electrodes in different applications.",signatures:"Andrés Alberto Arrocha Arcos and Margarita Miranda-Hernández",downloadPdfUrl:"/chapter/pdf-download/59355",previewPdfUrl:"/chapter/pdf-preview/59355",authors:[{id:"229755",title:"Dr.",name:"Margarita",surname:"Miranda-Hernández",slug:"margarita-miranda-hernandez",fullName:"Margarita Miranda-Hernández"},{id:"229760",title:"MSc.",name:"Andres A.",surname:"Arocha Arcos",slug:"andres-a.-arocha-arcos",fullName:"Andres A. Arocha Arcos"}],corrections:null}],productType:{id:"1",title:"Edited Volume",chapterContentType:"chapter",authoredCaption:"Edited by"},subseries:null,tags:null},relatedBooks:[{type:"book",id:"5195",title:"Magnetic Materials",subtitle:null,isOpenForSubmission:!1,hash:"4f04cfbb54e455378de5fc7725e36a0c",slug:"magnetic-materials",bookSignature:"Khan Maaz",coverURL:"https://cdn.intechopen.com/books/images_new/5195.jpg",editedByType:"Edited by",editors:[{id:"107765",title:"Dr.",name:"Maaz",surname:"Khan",slug:"maaz-khan",fullName:"Maaz Khan"}],equalEditorOne:null,equalEditorTwo:null,equalEditorThree:null,productType:{id:"1",chapterContentType:"chapter",authoredCaption:"Edited by"}},{type:"book",id:"5404",title:"Raman Spectroscopy and Applications",subtitle:null,isOpenForSubmission:!1,hash:"7d447d2811c5d3fc696761bb12fe3166",slug:"raman-spectroscopy-and-applications",bookSignature:"Khan Maaz",coverURL:"https://cdn.intechopen.com/books/images_new/5404.jpg",editedByType:"Edited 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Nayak",coverURL:"https://cdn.intechopen.com/books/images_new/5293.jpg",editedByType:"Edited by",editors:[{id:"38997",title:"Dr.",name:"Pramoda Kumar",surname:"Nayak",slug:"pramoda-kumar-nayak",fullName:"Pramoda Kumar Nayak"}],equalEditorOne:null,equalEditorTwo:null,equalEditorThree:null,productType:{id:"1",chapterContentType:"chapter",authoredCaption:"Edited by"}},{type:"book",id:"1790",title:"Materials Science and Technology",subtitle:null,isOpenForSubmission:!1,hash:"0b85a7bbf89f16101f9195f9588ee66d",slug:"materials-science-and-technology",bookSignature:"Sabar D. Hutagalung",coverURL:"https://cdn.intechopen.com/books/images_new/1790.jpg",editedByType:"Edited by",editors:[{id:"106047",title:"Dr.",name:"Sabar",surname:"Hutagalung",slug:"sabar-hutagalung",fullName:"Sabar Hutagalung"}],equalEditorOne:null,equalEditorTwo:null,equalEditorThree:null,productType:{id:"1",chapterContentType:"chapter",authoredCaption:"Edited by"}}],ofsBooks:[]},correction:{item:{id:"73132",slug:"corrigendum-to-soil-erosion-influencing-factors-in-the-semiarid-area-of-northern-shaanxi-province-ch",title:"Corrigendum to: Soil Erosion Influencing Factors in the Semiarid Area of Northern Shaanxi Province, China",doi:null,correctionPDFUrl:"https://cdn.intechopen.com/pdfs/73132.pdf",downloadPdfUrl:"/chapter/pdf-download/73132",previewPdfUrl:"/chapter/pdf-preview/73132",totalDownloads:null,totalCrossrefCites:null,bibtexUrl:"/chapter/bibtex/73132",risUrl:"/chapter/ris/73132",chapter:{id:"72647",slug:"soil-erosion-influencing-factors-in-the-semiarid-area-of-northern-shaanxi-province-china",signatures:"Ning Ai, Qingke Zhu, Guangquan Liu and Tianxing Wei",dateSubmitted:"February 25th 2020",dateReviewed:"May 22nd 2020",datePrePublished:"June 29th 2020",datePublished:"March 24th 2021",book:{id:"8937",title:"Soil Moisture Importance",subtitle:null,fullTitle:"Soil Moisture Importance",slug:"soil-moisture-importance",publishedDate:"March 24th 2021",bookSignature:"Ram Swaroop Meena and Rahul Datta",coverURL:"https://cdn.intechopen.com/books/images_new/8937.jpg",licenceType:"CC BY 3.0",editedByType:"Edited by",editors:[{id:"315343",title:"Dr.",name:"Ram Swaroop",middleName:null,surname:"Meena",slug:"ram-swaroop-meena",fullName:"Ram Swaroop Meena"}],productType:{id:"1",title:"Edited Volume",chapterContentType:"chapter",authoredCaption:"Edited by"}},authors:[{id:"319114",title:"Ph.D.",name:"Ning",middleName:null,surname:"Ai",fullName:"Ning Ai",slug:"ning-ai",email:"aining_office@126.com",position:null,institution:{name:"China Institute of Water Resources and Hydropower Research",institutionURL:null,country:{name:"China"}}},{id:"319299",title:"Prof.",name:"Tianxing",middleName:null,surname:"Wei",fullName:"Tianxing Wei",slug:"tianxing-wei",email:"weitianxing925@126.com",position:null,institution:{name:"Beijing Forestry University",institutionURL:null,country:{name:"China"}}},{id:"319300",title:"Prof.",name:"Qingke",middleName:null,surname:"Zhu",fullName:"Qingke Zhu",slug:"qingke-zhu",email:"xiangmub@126.com",position:null,institution:{name:"Beijing Forestry University",institutionURL:null,country:{name:"China"}}},{id:"319301",title:"Prof.",name:"Guangquan",middleName:null,surname:"Liu",fullName:"Guangquan Liu",slug:"guangquan-liu",email:"gqliu@iwhr.com",position:null,institution:{name:"China Institute of Water Resources and Hydropower Research",institutionURL:null,country:{name:"China"}}}]}},chapter:{id:"72647",slug:"soil-erosion-influencing-factors-in-the-semiarid-area-of-northern-shaanxi-province-china",signatures:"Ning Ai, Qingke Zhu, Guangquan Liu and Tianxing Wei",dateSubmitted:"February 25th 2020",dateReviewed:"May 22nd 2020",datePrePublished:"June 29th 2020",datePublished:"March 24th 2021",book:{id:"8937",title:"Soil Moisture Importance",subtitle:null,fullTitle:"Soil Moisture Importance",slug:"soil-moisture-importance",publishedDate:"March 24th 2021",bookSignature:"Ram Swaroop Meena and Rahul Datta",coverURL:"https://cdn.intechopen.com/books/images_new/8937.jpg",licenceType:"CC BY 3.0",editedByType:"Edited by",editors:[{id:"315343",title:"Dr.",name:"Ram Swaroop",middleName:null,surname:"Meena",slug:"ram-swaroop-meena",fullName:"Ram Swaroop Meena"}],productType:{id:"1",title:"Edited Volume",chapterContentType:"chapter",authoredCaption:"Edited by"}},authors:[{id:"319114",title:"Ph.D.",name:"Ning",middleName:null,surname:"Ai",fullName:"Ning Ai",slug:"ning-ai",email:"aining_office@126.com",position:null,institution:{name:"China Institute of Water Resources and Hydropower Research",institutionURL:null,country:{name:"China"}}},{id:"319299",title:"Prof.",name:"Tianxing",middleName:null,surname:"Wei",fullName:"Tianxing Wei",slug:"tianxing-wei",email:"weitianxing925@126.com",position:null,institution:{name:"Beijing Forestry University",institutionURL:null,country:{name:"China"}}},{id:"319300",title:"Prof.",name:"Qingke",middleName:null,surname:"Zhu",fullName:"Qingke Zhu",slug:"qingke-zhu",email:"xiangmub@126.com",position:null,institution:{name:"Beijing Forestry University",institutionURL:null,country:{name:"China"}}},{id:"319301",title:"Prof.",name:"Guangquan",middleName:null,surname:"Liu",fullName:"Guangquan Liu",slug:"guangquan-liu",email:"gqliu@iwhr.com",position:null,institution:{name:"China Institute of Water Resources and Hydropower Research",institutionURL:null,country:{name:"China"}}}]},book:{id:"8937",title:"Soil Moisture Importance",subtitle:null,fullTitle:"Soil Moisture Importance",slug:"soil-moisture-importance",publishedDate:"March 24th 2021",bookSignature:"Ram Swaroop Meena and Rahul Datta",coverURL:"https://cdn.intechopen.com/books/images_new/8937.jpg",licenceType:"CC BY 3.0",editedByType:"Edited by",editors:[{id:"315343",title:"Dr.",name:"Ram Swaroop",middleName:null,surname:"Meena",slug:"ram-swaroop-meena",fullName:"Ram Swaroop Meena"}],productType:{id:"1",title:"Edited Volume",chapterContentType:"chapter",authoredCaption:"Edited by"}}},ofsBook:{item:{type:"book",id:"7643",leadTitle:null,title:"Heavy Metal Ions Removal",subtitle:null,reviewType:"peer-reviewed",abstract:"
\r\n\tSince the issue related to an overload of heavy metals in the environment is one of the crucial aspects of sustainable development, the aim of this book will be to describe state of the art techniques used for efficient removal of heavy metals from the environment. Special attention will be paid to methods of waters treatment (industrial and natural) and soil remediation to improve its state.
\r\n\tThe description of possible chemical or physical techniques available nowadays will be enriched by biological methods. Methods with a high potential for commercialization are of particular importance, that is why some of the material presented in this book will relate to this aspect.
Different parametric traditional models are proposed for predicting different types of outcome variable (e.g., (quantitative, qualitative, and survival data)) and exploratory modeling. These parametric models are: generalized linear models (GLMs) [1], discriminant analysis [2], and survival analysis [3]. Also, different nonparametric methods are proposed for data prediction and some of these methods are: classic and Bayesian tree-based methods, support vector machines [4], artificial neural networks [5], multivariate adaptive regression splines [6], K-nearest neighbor [7], Bayesian networks [8], and generalized additive models (GAMs) [9].
\nClassic and Bayesian tree-based methods are defined as machine-learning methods for data prediction and exploratory modeling. These methods are supervised methods and are one of powerful and most popular tools for classification and prediction. These methods have some good advantages over traditional statistical methods and these advantages are [10, 11, 12]:
easy to interpret due to display result as graphically;
understanding result without requiring to have statistical experience;
deal with high-dimensional dataset and large dataset;
without requiring to determine assumptions about the functional form of the data;
deal with nonlinear relationships and high-order interactions;
invariant to monotone transformations of predictor variables;
robust to missing values;
robust to outliers;
robust to multicollinearity;
extract homogeneous subgroups of observations.
Tree-based methods have been used in different sciences such as medical studies and epidemiologic studies [13, 14, 15, 16, 17]. In these studies, tree models are used for determining risk factors of diseases and identifying high-risk and low-risk subgroups of patients. Tree methods can determine subgroups of patients that need to different diagnostic tests or treatment strategies, indeed these methods are useful for subgroup analysis [18, 19].
\nSeveral classic and Bayesian tree algorithms are proposed for classification trees, regression trees, and survival trees. These tree algorithms classify observations into a finite homogeneous subgroups based on predictor variables. Tree model is called classification tree, regression tree, and survival tree, if the outcome variable is a quantitative variable, qualitative variable, and survival data, respectively. Tree-based methods extract homogeneous subgroups of data by a recursively partitioning process and then fit a constant model or a parametric model such as linear regression, Poisson regression, and logistic regression for data prediction within these subgroups. Finally, this process is displayed graphically like a tree structure and this advantage is one of the attractive properties of tree models [20].
\nIn this chapter, we review classic and Bayesian classification and regression tree approaches. Owing to space limitation, Bayesian approaches are discussed more, because this chapter provides the first comprehensive review of Bayesian classification and regression trees.
\nWe begin with a discussion of the steps for tree generating of classic classification and regression trees in Section 2. We mention classic classification trees on Section 3. Section 4 provides a review on classic regression trees. Section 5 contains a discussion of treed generalized linear models. A review of Bayesian classification and regression trees is provided in Section 6. Appropriate criteria for determining the predictive performance of tree-based methods are mentioned in Section 7, and Section 8 presents the conclusion.
\nIn a dataset with an outcome variable Y and P-vector of predictor variables as X = \n
Tree growing step is the first step for tree generating and this step is performed using a binary recursive partitioning process based on a splitting function that this binary tree subdivides the predictor variable space. Tree growth begins at the root node and this node is the top-most node in the tree and includes all observations in the learning dataset. Tree grows by either splitting or not splitting each node of tree (each node contains a subset of learning dataset) into two child nodes or left and right daughter nodes using splitting rules for classifying observations into homogeneous subgroups in terms of outcome variable. Splitting rules for classifying observations are selected using some splitting functions. Binary recursive partitioning process continues until none of the nodes can split or stopping rule of tree growth is reached. We will mention these stopping rules. Binary recursive partitioning process splits each node of tree into only two nodes, but some of tree algorithms can generate multiway splits [20].
\nIn tree growing process, nodes that split are called internal node and otherwise are called terminal node. Each internal node includes a subset of dataset and all internal nodes in tree are parent of their subnodes. Each sample of learning dataset is placed in one of the terminal nodes of tree, and the tree size is equal to the number of terminal nodes of tree. Each node of tree is splitted based on a splitting rule for classifying observations into left and right daughter nodes. If chosen splitting rule is based on a quantitative predictor variable, then observations divide based on {\n
Several splitting functions are proposed for classification trees and some of them are [21]: Entropy, Information Gain, Gini Index, Error Classification, Gain Ratio, Marshal Correction, Chi-square, Twoing, Distance Measure [22], Kolmogorov-Smirnov [23, 24], and AUC-splitting [25]. Also, several studies compared the performance of splitting functions [21, 26, 27].
\nIn tree growing process, a predicted value is assigned to each node. Data prediction in classification trees such as C4.5 [28], CART [29], CHAID [30], FACT [31], QUEST [32], CRUISE [33], and GUIDE [34] is based on fitting a constant model like the proportion of the categories of outcome variable at each node of tree. CRUISE algorithm also can fit bivariate linear discriminant models [35] and GUIDE algorithm also can fit kernel density model and nearest neighbor model at each node of tree [34]. All mentioned classification trees except C4.5 tree algorithm accept user-defined misclassification cost, and all except CHAID and C4.5 methods accept user-defined class prior probabilities.
\nData prediction in regression trees such as AID [36], M5 [37], CART [29], and GUIDE [38] is based on fitting a constant model like the mean of outcome variable at each node of tree. M5 also can fit linear regression model and GUIDE can fit models such as linear regression model and polynomial model.
\nStopping the tree growth step is the second step for tree generating. Tree growth is continued until it is possible, and several rules are proposed for stopping the tree growth and we mention some of them [29, 39]:
There is only one observation in the terminal nodes.
All observations in the terminal nodes are belong to a category of outcome variable.
Node splitting is impossible, because all observations in each of terminal nodes have the same distribution of predictor variables.
Determining a user-specified minimum threshold for goodness-of-fit criterion of splitting rules.
There is the number of observations less than a user-specified minimum threshold in the terminal nodes.
Determining a user-specified maximum for depth of tree.
Tree pruning step is the third step for tree generating and this step is one of the main steps for tree generating. Tree algorithm produces a large maximal tree or saturated tree (the nodes of this tree cannot split any further, because terminal nodes have one observation or observations are belong to a category of outcome variable within each terminal node) and then prunes it to avoid overfitting. In this step, a sequence of trees is generated and each tree in this sequence is an extension of previous trees. Finally, an optimal tree is selected among the trees of sequence based on having lowest cost of misclassification (for classification tree) and lowest estimated prediction error (for regression tree) [29].
\nSeveral methods are proposed for tree pruning and some of these methods are [39, 40]: cost-complexity pruning, reduced error pruning, pessimistic error pruning, minimum error pruning, error-based pruning, critical value pruning, and minimum description length pruning [41]. Also, several studies compared the performance of pruning methods [39, 40].
\nSeveral classic classification tree approaches are proposed to classify observations, and data prediction in a dataset contains a qualitative outcome variable Y with K categories or classes and P-vector of predictor variables as X = \n
THAID classification tree algorithm is developed by Messenger and Mandell in 1972 and is the first published classification tree algorithm [50]. This tree algorithm only deals with qualitative predictor variables and uses a greedy search approach for tree generating. Splitting function in THAID algorithm is based on the number of cases in categories of outcome variable, and splitting rule for node splitting is selected based on minimizing the total impurity of new two daughter nodes. THAID method does not use any pruning method, and tree growth is continued until decrease in impurity is higher than a minimum user-specified limit.
\nCHAID classification tree algorithm is developed by Kass in 1980 and this algorithm is a descendant of THAID tree algorithm [30]. This algorithm can generate multiway splits and tree-growing process including three steps: merging, splitting, and stopping. Also, continuous predictor variables must be categorized, because CHAID only accepts qualitative predictor variables in tree generating process. CHAID algorithm uses significance tests with a Bonferroni correction as splitting function, and best splitting rule is selected based on having lowest significance probability. This tree algorithm generates biased splits and deals with missing values. CHAID algorithm is implemented in these software programs: SPSS, STATISTICA, and R (CHAID package).
\nExhaustive CHAID algorithm is proposed by Biggs et al. in 1991 and this algorithm is an improved CHAID method. The splitting and stopping steps of this algorithm are the same as the CHAID algorithm, and it just changed to improve merging [51].
\nThe classic CART model was developed by Breiman et al. in 1984 and this model is a binary tree algorithm [29]. CART algorithm is one of the best known classic classification and regression trees for data mining. CART algorithm generates a classification tree using a binary recursive partitioning, and tree generating process in this algorithm contains four steps: (1) tree growing: tree growth is based on a greedy search algorithm that CART algorithm grows tree by sequentially choosing splitting rules. This classification tree algorithm provides three splitting functions for choosing splitting rules, and these splitting functions are: entropy, Gini index, and twoing. (2) tree growing process continues until none of the nodes can split, and a large maximal tree is generated. (3) tree pruning: CART uses cost-complexity pruning method for tree pruning to avoid overfitting and to obtain “right-sized” trees. This pruning method generates several subtrees or a sequence of pruned trees, and each tree in this sequence is an extension of the previous trees. (4) best tree selection: CART uses independent test dataset or cross-validation to estimate the prediction error (misclassification cost) of each tree and then selects the best tree from sequence of trees with lowest estimated prediction error.
\nCART can generate linear combination splits and uses surrogate splits for dealing with missing values, and also, these surrogate splits are used to measure an importance score for predictor variables. This best known classic tree algorithm suffers from some problems such as greediness, instability, and bias in split rule selection [52]. CART is available at these software programs: CART, R (rpart package), SPSS, STATISTICA, WEKA, and TANAGRA.
\nID3 classification tree algorithm is proposed by Quinlan in 1986 [53]. This algorithm uses a greedy algorithm using information gain as splitting function and this splitting function is based on entropy splitting criterion and best splitting rule has highest information gain. ID3 does not use any pruning methods, and tree growth process is continued until all observations in the terminal nodes are belong to a category of outcome variable and/or best information gain is near to zero. This algorithm only deals with qualitative predictor variables (if dataset contains quantitative predictor variables, they must be categorized). Also, ID3 algorithm cannot impute missing values, and this method like CART model suffers from selection bias, because ID3 algorithm favors the predictor variables with more values for node splitting of tree. ID3 is implemented in these software programs: WEKA and TANAGRA.
\nFACT classification tree algorithm was introduced by Loh and Vanichsetakul in 1988 [31]. In this algorithm, variable selection for node splitting based on quantitative predictor variable is based on having the largest F-statistics of analysis of variance (ANOVA), and then, linear discriminant analysis is used to determine split point for this variable. FACT model transforms qualitative predictor variables into ordered variables in two steps (first step: these variables are transformed into dummy vectors, second step: these vectors are projected onto the largest discriminant coordinate). FACT generates unbiased splits when dataset contains only quantitative predictor variables. Also, it, unlike other classification tree methods (C4.5, CART, QUEST, GUIDE and CRUISE), does not use any pruning methods, and tree growing is stopped when stopping rule is reached. FACT can deal with missing values and missing values of quantitative and qualitative predictor variables are imputed at each node by the means and modes of the non-missing values, respectively.
\nC4.5 classification tree algorithm is developed by Quinlan in 1993 and this algorithm is an extension of ID3 tree algorithm [28]. This algorithm uses a greedy algorithm using gain ratio as splitting function and generates biased splits. C4.5, unlike ID3 method, deals with quantitative and qualitative predictor variables and also, deals with missing values. In this tree method, split of quantitative predictor variable is binary split and split of qualitative predictor variable is multiway split (a branch is created for each category of qualitative predictor variable). Pruning method used in this algorithm is error-based pruning method. C4.5 is available at these software programs: R (Rweka package), WEKA, TANAGRA, and also can obtain from: http://www.rulequest.com/Personal/. Also, J4.8 tree algorithm is Java implementation of the C4.5 algorithm in WEKA software.
\nQuest classification tree algorithm is developed by Loh and Shih in 1997, and this model generates binary splits [32]. This method, unlike other classification algorithms such as CART and THAID, does not use exhaustive search algorithm (because these algorithms suffer from variable selection bias) and so improves computational cost and variable selection bias. Quest tree method uses statistical test for selecting variable splitting and then variable with smallest significance probability is selected to split node of tree. This method uses F-statistics of analysis of variance (ANOVA) for quantitative predictor variables and chi-square test for qualitative predictor variables. After determining variable, an exhaustive search is implemented to find the best split point and QUEST method uses quadratic discriminant analysis for selecting split point. For determining split point of a qualitative variable, values of this variable must be transforming like method used in FACT algorithm.
\nQuest like CART can generate linear combination splits and uses cost-complexity pruning method for tree pruning. Missing values of quantitative and qualitative predictor variable are imputed at each node by the means and modes of the nonmissing values, respectively. Software for QUEST algorithm can be obtained from: www.stat.wisc.edu/~loh/.
\nCRUISE tree algorithm was introduced by Kim and Loh in 2001, and this algorithm, unlike other classification tree algorithms (CART and QUEST), generates multiway splits [33]. CRUISE method is free of selection bias and can detect local interactions. Two methods of variable selection are used in this tree model and these methods are: 1D (similar to the method used in QUEST method) and 2D. CRUISE method like CART and QUEST can generate linear combination splits and uses cost-complexity pruning method for tree pruning. Also, a bivariate linear discriminant model can fit instead of constant model in each node of tree [35]. CRUISE uses several methods for imputing missing values in the learning dataset and dataset used for tree pruning. Software for CRUISE algorithm can be obtained from: www.stat.wisc.edu/~loh/.
\nGUIDE tree algorithm was introduced by Loh in 2009, and this method is an evolution of FACT, QUEST, and CRUISE algorithms and improves the weaknesses of these algorithms [34]. It like QUEST and CRUISE generates unbiased binary splits and can perform splits on combinations of two predictor variables at a time. Also, GUIDE like QUEST and CRUISE methods performs the two-step approach based on significance tests for splitting each node. GUIDE uses a chi-squared test of independence of each independent variable versus dependent variable on the data in the node and computes its significance probability. It chooses the variable associated with the smallest significance probability and finds a split point that minimizes the sum of Gini indexes and uses it to split the node into two daughter nodes.
\nGUIDE method uses cost-complexity pruning method for tree pruning (this method is used in other tree algorithms such CART, QUEST, and CRUISE). It deals with missing values and assigns them as a separate category. Also, this tree method can compute importance score for predictor variables and can use nearest neighbor model and bivariate kernel density instead of constant model in the nodes of tree. Software for GUIDE algorithm can be obtained from: www.stat.wisc.edu/~loh/.
\nSeveral tree methods are proposed for predicting an ordinal outcome variable. Twoing splitting function is extended by Breiman et al. for using classification tree for ordinal outcome variable [29] and also Piccarreta extended Gini-Simpson criterion for this case [54]. Archer proposed a package in R software (rpartOrdinal package) and this package contains some splitting functions for tree generating for predicting an ordinal outcome variable [55]. Also, Galimberti et al. developed a package in R software (rpartScore package) that overcomes some problems of rpartOrdinal package [56]. Tutz and Hechenbichler extended ensemble tree methods such as bagging and boosting for analyzing an ordinal outcome variable [57]. For study about other approaches, refer to Refs. [49, 57, 58, 59, 60].
\nIn an imbalanced dataset, one of the classes of outcome variable has fewer samples than other classes and this class is rare. In real applications such as medical diagnosis studies, this rare class is the interest for analyzing. Due to the skew distribution of classes, most classification tree algorithms predict all samples of rare class as a class with more samples. Indeed, these models are not robust to unbalance between classes and have good diagnostic performances only on the class with more samples. Several remedies have been proposed to solve this problem for using classification tree algorithms on the imbalanced datasets. Some of these remedies are: sampling methods (undersampling, oversampling, and synthetic minority oversampling technique (SMOTE)), cost-sensitive learning, class confidence proportion decision tree [61], and Hellinger distance decision trees [62]. Ganganwar in 2012 provides a review of classification algorithms for imbalanced datasets [63].
\nSeveral classic regression trees are proposed to classify observations, and data prediction in a dataset contains a quantitative outcome variable Y and P-vector of predictor variables as X = \n
AID regression tree algorithm is proposed by Morgan and Sonquist in 1963, and this algorithm is the first published regression tree algorithm [36]. It generates binary splits and piecewise constant models. This algorithm uses a greedy search for tree generating and a splitting rule is selected based on minimizing the total sum of the square errors. AID suffers from bias in variable selection and this method does not use any pruning method and tree growing is stopped when the reduction in total sum of the square errors is less than a predetermined value.
\nCART algorithm considers both classification and regression trees, and tree-generating process in CART algorithm for generating a regression tree is like classification tree [29]. But another splitting function is used to choosing splitting rules of regression tree, and this function is least squares deviation. Also, CART algorithm for selecting best regression subtree uses independent test dataset or cross-validation to estimate the prediction error (sum of squared differences between the observations and predictions) of each tree to select the best tree from sequence of trees with lowest estimated prediction error. CART algorithm for regression tree generating like classification tree uses surrogate splits for imputing missing values and can generate linear combination splits. CART is available at these software programs: CART, R (rpart package), STATISTICA, WEKA, and TANAGRA.
\nM5 tree algorithm is proposed by Quinlan in 1992 and this algorithm like AID and CART methods generates a piecewise constant model and then fits a linear regression model in nodes of tree [37]. M5 improves the prediction accuracy of tree algorithm using linear regression model at nodes and deals with missing values. Also, this method like CART algorithm uses least-squares deviation as splitting function and can generate multiway splits. In M5, smoothing technique is used after tree pruning, and this technique improves the accuracy predictions. Wang and Witten in 1996 proposed M5′ tree algorithm, and this method is based on M5 method [70]. This method is available at these software programs: WEKA and R (RWeka package).
\nGUIDE method is introduced by Loh in 2002, and it generates unbiased binary splits [38]. This method uses a regression model at each node of tree and calculates the residuals. Then, residuals are transformed to a binary variable based on the sign of them (positive or negative), and algorithm is followed like algorithm used for classification tree. This tree method like method used for classification tree uses missing value category and can compute importance score for predictor variables. GUIDE can fit models such as linear regression model and polynomial model instead of constant model in the nodes of tree. Software for GUIDE method can be obtained from: www.stat.wisc.edu/~loh/.
\nSome of tree-based methods such as CART, QUEST, C4.5, and CHAID fit a constant model in the nodes of tree, thus a large tree is generated, and this tree has hard interpretation. Treed models, unlike conventional tree models, partition data into subsets and then fit a parametric model such as linear regression, Poisson regression, and logistic regression instead of using constant models (mean or proportion) for data prediction. Treed models generate smaller trees in comparison to tree models. Also, treed models can be a good alternative for traditional parametric models such as GLMs, when these parametric models cannot estimate relationship between outcome variable and predictor variables across a dataset. Several tree algorithms are developed that fit parametric models into terminal nodes, and to study these algorithms, refer to Refs. [71, 72, 73, 74, 75, 76, 77].
\nThe classic CART algorithm was developed by Breiman et al. in 1984, and this model is one of the best known classic classification and regression trees for data mining. But this algorithm suffers from some problems such as greediness, instability, and bias in split rule selection. CART generates a tree by using a greedy search algorithm, and this search algorithm has disadvantages such as: limit the exploration of tree space, dependence future splits to previous splits, generate optimistic error rates, and the inability of the search to find a global optimum [78]. CART has instability problem, because by resampling or drawing bootstrap samples from dataset may generate tree with different splits [79]. The splitting method in CART model is biased toward predictor variables with many distinct values and more missing values [80, 81].
\nSeveral tree models are suggested to solve these problems and these remedial models are ensemble of trees such as Random Forests [82], Bagging [83], Boosting [84], Multiboost [85], and LogitBoost [86] (for solving instability problem), tree algorithms such as CRUISE [33, 35], QUEST [32], GUIDE [34], CTREE [49], and LOTUS [71] (for solving bias in split rule selection problem), and Bayesian tree approaches and evtree algorithm [78] are suggested to solve greediness problem of CART. Also, Bayesian tree approaches can quantify uncertainty, and these approaches explore the tree space more than classic approaches.
\nSeveral Bayesian approaches are proposed for tree-based methods [87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98]. In these Bayesian tree approaches like classic tree approaches, a model is called Bayesian classification trees if the outcome variable is a qualitative variable. Also, a model is called Bayesian regression trees if the outcome variable is a quantitative variable. The method of data prediction in these Bayesian approaches is like classic approaches. The method of data prediction for Bayesian classification trees is based on fitting a constant model like the proportion of the outcome variable in the terminal nodes. Data prediction in Bayesian regression tree is based on fitting a constant model like the mean of the outcome variable in the terminal nodes.
\nClassic tree approaches use only observations for data analysis, but Bayesian approaches combine prior information with observations. Bayesian tree approaches define prior distributions on the components of classic tree approaches and then utilize stochastic search algorithms through Markov chain Monte Carlo (MCMC) algorithms or deterministic search algorithms for exploring tree space [87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98].
\nBayesian tree approaches have materials such as prior distribution function, posterior distribution function, data likelihood function, marginal likelihood function, stochastic search algorithm or deterministic search algorithm for exploring tree space, stopping rule of simulation algorithm (if stochastic search algorithms are used to simulate from posterior distribution and explore tree space) and criteria for identify good trees (if model produces several trees). In this section, we review Bayesian tree approaches and also mention the results of published papers based on using these Bayesian algorithms for data analysis.
\nThe first Bayesian tree approach for classification tree model was proposed by Buntine in 1992. This proposed approach offers a full Bayesian analysis for classification tree model by using a deterministic search algorithm instead of using a stochastic search algorithm [87]. This model like other classic tree models uses a splitting function for tree growth using Bayesian statistics with similar performance to splitting methods such as Information Gain and Gini. Buntine also like traditional tree models, in order to prevent overfitting model, used Bayesian smoothing and averaging techniques instead of pruning the tree.
\nIn this Bayesian approach, prior distributions are defined on the tree space and data distribution in the terminal nodes of tree (similar priors distributions use for data distribution in the terminal nodes unlike prior distributions considered on the tree space). Buntine showed the superior performance of Bayesian approach in comparison to classic tree algorithms such as CART model of Breiman et al. and C4 model of Quinlan et al. [99] on several datasets [87]. This Bayesian approach may be obtained from: http://ksvanhorn.com/bayes/free-bayes-software.html.
\nCGM (Chipman, George, McCulloch) proposed a Bayesian approach for CART model by defining prior distributions on the two components of CART model \n
where \n
Start from T that includes only a root node (terminal node \n
Slit terminal node \n
If terminal node \n
Let T as newly created tree from step 3 and run steps 2 and 3 on this tree with \n
In this approach, the posterior distribution function p(T|X, y) is computed with combining the marginal likelihood function p(Y|X, T) and tree prior p(T) as follows:
\n\n
p\n
A stochastic search algorithm is used for finding good models and simulating from relation (2) by using a MCMC algorithm such as Metropolis-Hastings algorithm. This Metropolis-Hastings algorithm simulates a Markov chain sequence of trees namely \n
Generate a candidate value \n
Set \n
Else, set \n
In this simulation algorithm, q(\n
This Bayesian approach unlike classic CART model does not generate a single tree, thus good trees for classification tree are selected based on criteria such as having lowest misclassification and largest marginal likelihood function. Also, good trees for regression tree are determined based on having the largest marginal likelihood function and lowest residual sums of squares. CGM by using simulation showed that stochastic search algorithm can find better trees than a greedy tree algorithm. They indicated that the Bayesian classification approach has lower misclassification rate than CART model and they also used Bayesian model averaging for improving prediction accuracy of Bayesian classification trees [89].
\nDMS (Denison, Mallick, Smith) in 1998 proposed a Bayesian approach for the CART model, and this approach is quite similar to Bayesian approach of CGM with just minor differences [88]. In this approach, prior distributions are defined over the splitting node (S), splitting variable (V), splitting rule (R), tree size (𝒦), and parameters of data distribution in terminal nodes (\n
In this Bayesian approach, joint distribution of model parameters is defined as follows (\n
This Bayesian approach puts a prior distribution over the tree size to avoid overfitting data and uses a truncated Poisson distribution with parameter 𝜆 (𝜆 shows the expected number of nodes in the tree and a weakly informative is used prior for tree size by setting 𝜆 equal to 10) for \n
Also, \n
So, prior for this Bayesian approach is defined as follows:
\nIn this approach, Bayesian analysis of tree size 𝒦 and parameter set \n
Also, simulation from the above equation is done by using MCMC algorithms to find good trees and Reversible Jump MCMC algorithm is used to simulate from this equation [100]. This simulation algorithm is performed for a single long chain with a burn-in period to explore the tree space. In this simulation algorithm, trees cannot have sample size less than 5 in the terminal nodes and also cannot have size higher than 6 in during burn-in period of simulation chain of posterior distribution. Reversible Jump MCMC algorithm used by DMS to simulate from Eq. (9) includes four steps: BIRTH (GROW), DEATH (PRUNE), VARIABLE, and SPLITTING RULE. In this simulation algorithm, BIRTH step, DEATH step, VARIABLE step, and Splitting RULE step are randomly chosen with probability \n
Stating with an initial tree.
Set \n
Generate u \n
Go to step type determined by u (a step type is determined based on following conditions):
if (\n
else if (\n
else if (\n
else, go to RULE step
\nThen, acceptance probability (\n
if (\n
The stopping criterion of the above simulation algorithm is based on the stability of the posterior distribution and it can be assessed by drawing a plot of iterations of chain against sampled parameter values. This Bayesian approach, unlike CART, does not produce a tree using stochastic search algorithm. Thus, good classification trees are selected based on criteria such as misclassification rate, deviance (−2log \n
CGM, 2000 proposed a Bayesian approach for regression tree with mean-shift model based on computational strategy of CGM’s Bayesian approach in 1998. Unlike the Bayesian approach (1998), it can assume dependence of parameters in the terminal nodes. Indeed, hierarchical priors are used for these parameters and therefore shrunk trees are generated [90]. Hierarchical priors have some advantages such as: shrinkage is used in the stochastic search algorithm unlike proposed methods for tree shrinkage (because these methods use shrinkage after searching tree), fitting a larger tree to the dataset without overfitting and improve predictions. CGM by using simulation showed the superior performance of new Bayesian approach for regression tree with mean-shift model in comparison to Bayesian approach of CGM in 1998, CART model, and tree shrinkage methods of Hastie and Pregibon [90, 101].
\nWTW (Wu, Tjelmeland, West), 2007 proposed a Bayesian approach for CART model based on the computational strategy of Bayesian approach of CGM (1998) [95]. In this approach, prior distributions define on the tree, splitting variables, splitting thresholds, and parameters in the terminal nodes. This Bayesian approach like approaches of CGM [89, 90, 92, 93] simulates from the posterior distribution by using the Metropolis-Hastings algorithm. The steps used in simulation algorithm of WTW include GROW step and PRUNE step, CHANGE step, SWAP step, and RESTRUCTURE (RADICAL) step (first three steps are similar to steps of simulation algorithm in Bayesian approaches of CGM). RESTRUCTURE step creates large changes in the structure of tree, but tree size is unchanged. There are some advantages by adding this step to simulation algorithm of posterior distribution such as: improving the convergence of the MCMC algorithm, elimination of the need for restarts of the simulation algorithm unlike Bayesian approaches of CGM, and large changes in the structure of tree without change in tree size.
\nIn this approach, convergence diagnostics of simulation algorithm are based on plots such as: plots of iteration number against log posterior distribution, log marginal likelihood function, number of terminal nodes, and number of times that a particular predictor variable is shown as a splitting variable in the tree. WTW showed the superior performance of Bayesian approach in comparison to CART model and that the Bayesian approach had a lower misclassification rate than the CART model [95].
\nOML (O’Leary, Mengersen, Low Choy), 2008, proposed a Bayesian approach for CART model by extending the Bayesian approach of DMS. These two Bayesian approaches have differences such as the stopping rule of the simulation algorithm or convergence diagnostic plots, criteria for identifying good trees and prior distributions considered for parameters in the terminal nodes [88, 96, 98].
\nThe stopping criterion of simulation chain in OML’S Bayesian classification trees approach has two steps. The first step includes the plot of iterations against accuracy measures (false and positive negative rate and misclassification rate), log posterior, log likelihood, and tree size. If these plots show stability in mentioned items, then in second step, structure of component trees (variables and splitting rules at each splitting node) examines in the set of good trees and if this structure was stabilized and/or the same trees were in this set, then convergence has occurred for this simulation chain; otherwise, iterations must be increased until convergence.
\nThe set of good trees in this Bayesian classification tree approach is determined based on the accuracy measures computed from the confusion matrix of Fielding and Bell [102]. Good trees have lowest misclassification rate and false positive and negative rate (or using highest sensitivity and specificity instead of lowest false positive and negative rate) [96, 98, 103]. After convergence of simulation chain, two or three trees are selected as the best trees among set of good trees based on criteria such as modal structure of tree (same size tree with the same variables and splitting rules), lowest misclassification rate, false negative and positive rate and deviance, highest posterior probability and likelihood, using expert judgment and biological interpretability [96, 98, 103].
\nThe stopping rule of simulation algorithm for regression tree like classification tree includes two steps. In the first step, plot of iterations are drawn against posterior probability, residual sum of squares, and deviance. If these abovementioned items are stable, then structure of component trees examines in the set of good trees and if this structure was stabilized, convergence has been occurred for this simulation chain. Also, set of good trees for regression tree is selected based on having the highest posterior probability and likelihood, lowest residual sum of squares, and deviance [98].
\nOML compared the Bayesian classification trees with the classic CART model on an ecological dataset and concluded that Bayesian approach has smaller false positive rate, misclassification rate, and deviance than CART model, while the CART model has lower false negative rate, but this model had higher false positive rate [96]. They, in 2008, indicated that this Bayesian approach had a lower false negative rate in comparison to Bayesian approach of DMS, but approach of DMS had a lower false positive rate and misclassification rate [96].
\nOML in 2009 compared predictive performance of random forests with the Bayesian classification trees on the three datasets and they concluded that the best tree selected with Bayesian classification trees has higher sensitivity and better accuracy in comparison to random forests. They expressed that the Bayesian approach may have better performance than random forests in determining important predictor variables in datasets with a large number of noise predictor variables. OML also indicated that the Bayesian classification tree approach unlike random forests is not biased toward assignment of observations to the largest class of outcome variable in predicting data [103].
\nOML and Hu in 2011 compared the performance of Bayesian classification trees with the CART of Breiman et al., and they concluded that the Bayesian approach has higher sensitivity and specificity in comparison to CART. They also investigated overfitting of the Bayesian approach by using cross-validation method, and this approach did not show any evidence of overfitting [98].
\nOMML (O’Leary, Mengersen, Murray, Low Choy), 2008, proposed a Bayesian classification tree approach based on the computational strategy of Bayesian classification tree approach of OML and by using informative priors [96, 97]. In this Bayesian approach, informative priors are used to define Dirichlet distributions for splitting node, splitting variable, and splitting rule as follows:
\nIn Bayesian approach of OML, there was no prior information about splitting node, splitting variable, splitting rule, and hyperparameters in the Dirichlet distributions of above equations. So, these hyperparameters were set equal to 1 and uniform non-informative priors used for splitting node, splitting variable, and splitting rule [96, 98, 103]. In this new approach, an expert is subjected with three questions (ordering, grading, and weighting) about splitting node, splitting variable, splitting rule, and tree size for defining informative priors. Then, existing hyperparameters in the relations (13), (14) and (15) are determined by following the result of a question. Three questions are used for size of the tree to determine λ in relation (6). DMS and OML used a weakly informative prior for tree size by setting λ = 10 [88, 96, 98, 103]. But OMML unlike DMS and OML used an informative prior for size of the tree [96, 97].
\nO’Leary et al. in 2008 investigated sensitivity to the choice of the hyperparameters of informative priors for tree size, splitting nodes, splitting variables, and splitting rules in classification trees and they concluded that posterior distribution is relatively robust to these priors except for extreme choices of them [96, 97].
\nOMML by simulation indicated that the best tree of Bayesian classification trees based on the informative priors has lower false negative rate in comparison to the best tree of Bayesian classification trees based on the non-informative priors [96, 97]. They also indicated the superior performance of Bayesian classification trees based on the informative priors in comparison to proposed expert elicitation approaches for Bayesian logistic regression model [97, 104, 105, 106, 107].
\nPratola like Wu et al. proposed new Metropolis-Hastings proposals for Bayesian regression trees for improving the convergence of the MCMC algorithm [108]. CGM, 2003, proposed Bayesian treed GLMs by extending CGM’s Bayesian approach (1998) [91]. Gramacy and Lee developed Bayesian treed Gaussian process models for a continuous outcome by combining standard Gaussian processes with treed partitioning [109]. Other Bayesian approaches are also proposed for tree-based models that we mention in the references. Refer to the Refs. [110, 111, 112] for other Bayesian tree approaches of CGM. Also, Chipman et al. review advance models for Bayesian treed methods and refer to the Ref. [113]. For study about other tree-based Bayesian approach, refer to Refs. [114, 115, 116, 117, 118]. Also, Refs. [119, 120] are proposed Bayesian approaches for ensemble trees.
\nPredictive performance of classification tree models can compare using accuracy measures such as [17, 121]: sensitivity, specificity, false positive rate, false negative rate, positive predictive value, negative predictive value, positive likelihood ratio, negative likelihood ratio, accuracy, Youden’s index, diagnostic odds ratio (DOR), F-measure, and area under curve (AUC). Sensitivity, specificity, positive and negative predictive values, Youden’s index, and accuracy have values between 0 and 1, and when these criteria are near to 1, then classification tree algorithm has better predictive performance. Also, false positive and false negative rates are between 0 and 1, and when these values are near to 0, then classification tree algorithm has better predictive performance. Classification tree models with positive likelihood ratio >10, negative likelihood ratio <0.1, and high diagnostic odds ratio have good predictive performance. AUC shows an overall performance measure and is between 0 and 1. Higher value shows an overall good performance measure, and a perfect diagnostic performance has an AUC equal to 1.
\nPredictive performance of regression tree algorithms can compare using criteria such as [122, 123]: Pearson correlation coefficient, root mean-squared error (RMSE), relative error (RE), mean error (ME), mean absolute errors (MAE), and bias.
\nBayesian tree has some advantages in comparison to classic tree-based approaches. Classic CART model cannot explore the space of the tree fully and the result of tree is only locally optimal due to using greedy search algorithm. But Bayesian tree approaches investigate different tree structures with different splitting variables, splitting rules, and tree sizes, so these models can explore the tree space more than classic tree approaches. Indeed, Bayesian approaches are remedies for solving this problem of CART model. Also, CART is biased toward predictor variables with many distinct values, and Bayesian tree models can be a remedial for solving this problem. Because Bayesian approaches proposed by CGM, DMS, OML, and WTW utilize uniform distribution for selecting splitting node, splitting variables, and splitting rules, thus these approaches generate unbiased splits or have not any bias toward predictor variables with more splits. These approaches unlike classic tree approaches generate several trees that this advantage makes researchers to select the best tree based on study aim. Because in some studies, sensitivity is important for researcher and in other studies, specificity is important.
\nSome authors compared Bayesian approaches with classic tree approaches such as CART and random forests of Breiman and others models. Results of most papers indicated that Bayesian approach tends to present that the Bayesian method is superior to all other competitors. This can be for a variety of reasons: publication bias (methods that do not demonstrate superior performance typically do not get published), choice of examples that demonstrate superiority of their method, or more careful use of their method than the competing methods. Studies that may give more reliable comparisons would be ones in which there is no new method, and the paper is devoted to a comparison of existing approaches. For study about some of these papers, refer to Refs. [124, 125, 126, 127].
\nAccording to empirical results, we can conclude that Bayesian approaches have better performance in comparison to classic CART model. Also, despite some advantages for Bayesian tree approaches in comparison with classic tree models, the number of published articles based on using Bayesian tree approaches for data analysis is low. One of the major reasons for this problem can be related to lack of user-friendly software and or need to have programming knowledge. On the other hand, the number of published papers based on employing CART model, random forests, and other classic tree models is many and one of the reasons for this frequency can be several software programs such as CART, SPSS, TANAGRA, STATISTICA, R, and WEKA.
\nBayesian tree approaches need more research, because these approaches unlike CART and random forests cannot impute missing values. These approaches also cannot create linear combination splits like other tree algorithms (CART, QUEST, and CRUISE), even though interpretation of these splits is hard, but results indicated that tree methods with these splits have superior prediction accuracy in comparison to tree with univariate splits [128].
\nThis chapter aims to provide background information about head and neck cancers, including their respective treatment options and radiotherapy techniques. It is divided into 4 parts. Part 1 summarizes the information about head and neck cancers and the use of radiotherapy for head and neck cancers. Part 2 introduces the intensity-modulated radiotherapy (IMRT) which is commonly used in the treatment of head and neck cancers. Part 3 reviews the planning techniques of IMRT. Finally, part 4 discusses the current challenges of head and neck cancers radiotherapy and the promises to overcome the challenges.
Head and neck cancers refer to the carcinomas that originate from any parts of the upper aero-digestive tract. They also include the cancers of the thyroid and salivary glands. Although head and neck cancers no longer rank among the top 5 cancers in the latest report [1], they are still regarded as major types of cancer in Hong Kong [2]. One of the main reasons for this recognition is that nasopharyngeal cancer (NPC) is ranked sixth in terms of the number of new cases in the male population in Hong Kong [1]. The NPC worldwide figures illustrated by the age-standardized rate (ASR) was 1.2 per 100,000 [3], which were much lower than the incidence in Hong Kong which was 7.4 per 100,000 in the year 2012 [1]. The high incidence of NPC in Hong Kong is attributed to its special geographical epidemiology pattern that 76% of new cases were found in east and south-eastern parts of Asia, in which Hong Kong is situated [4]. Other head and neck cancers recorded in the Hong Kong Cancer Registry include cancers of the lip, oral cavity, pharynx, nasal cavity, middle ear and accessory sinuses, larynx, and thyroid gland. Altogether, there were 2617 new cases of head and neck cancers reported in 2016 in Hong Kong, which accounted for 8.3% of all cancer new cases [1]. NPC was the most common type of head and neck cancer, accounting for 46.6% of all new cases. It was followed by the cancer of the tongue and larynx which accounted for 13.9% and 11.4%, respectively [1]. Although there have been some variations in the trend of ASR between sub-sites, the overall ASR of head and neck cancers in Hong Kong has remained around 21 per 100,000 in the past decade. Because of the relatively high incidence of head and neck cancers, their treatment remains one of the major burdens in the health care services in Hong Kong [2].
The role of radiotherapy in the radical treatment of five types of head and neck cancers including cancers of the nasopharynx, oral cavity, larynx, maxillary sinus, and parotid gland is discussed in this section. Intensity-modulated radiotherapy is a standard radiotherapy technique used. The benefit of IMRT is that it is capable of delivering highly conformal doses to the target while sparing the nearby organs at risk (OARs).
Radiotherapy is the major treatment modality for nasopharyngeal carcinoma (NPC). It is because the primary tumor site of NPC is difficult to be accessed by surgical intervention, and the tumor cells of NPC are sensitive to radiation [5]. The use of radiotherapy alone is effective to treat stage I to II NPC, while concurrent chemotherapy is added for higher stages disease to achieve better local-regional control and survival outcome [6]. IMRT is the preferred radiotherapy technique and the late side effect of xerostomia in patients receiving IMRT was significantly reduced [7]. The current standard of the prescribed total dose to the primary tumor is to give 70 Gy in 33–35 fractions [8]. With the use of simultaneous integrated boost, the prophylactic dose which is lower than the dose to the primary tumor is prescribed for the potential microscopic spread of the primary tumor and selected cervical lymph nodes regions. The prophylactic prescription can be varied in different local practices, it was reported that the prescriptions for the intermediate and low-risk cervical lymph nodes were about 60 Gy and 50 Gy, respectively [8, 9].
The cancer of the oral cavity includes various sub-sites such as the anterior tongue, buccal mucosa, hard palate, soft palate, alveolus, and floor of the mouth. The primary treatment of the cancer of the oral cavity varied according to the stage, which can be briefly divided into early and advanced. For early-stage which refers to T1 and early T2 tumors, radiotherapy entirely or partly delivered by brachytherapy can result in similar local control as in surgery [10, 11]. However, a recent retrospective study reported that primary radiotherapy to early-stage oral cavity cancer patients resulted in higher mortality as compared with those who received primary surgery [12]. It has also been reported in the same article that the majority (more than 95%) of early-stage oral cavity cancer patients received primary surgery. The small proportion of patients receiving primary radiotherapy in this group of patients was attributed to the fact that brachytherapy services were not available due to lack of expertise and suitability of applicator for insertion [10]. Hence, most early-stage oral cavity cancer patients receive surgery for primary treatment, although radiotherapy is also an alternative. Postoperative radiotherapy is only indicated for positive or close margins after resection [13]. For advanced oral cavity cancer, surgery is often the standard primary treatment whenever resectable [14], and then followed by adjuvant radiotherapy or chemo-radiotherapy. For non-resectable advanced oral cavity cancer, radical radiotherapy is offered in conjunction with chemotherapy or targeted therapy to improve disease control [15]. The total prescribed dose is 70 Gy to the gross tumor or 66 Gy to the tumor bed after resection, delivered with 2 Gy per fraction. Similar to NPC, prophylactic irradiation to the cervical lymph nodes regions is also used, where 60 Gy and 54 Gy are prescribed to the intermediate-risk and low-risk regions, respectively [16].
A specific consideration when treating cancer of the larynx is preserving organs and function. Radiotherapy alone or concurrent chemoradiotherapy is the most widely applied approach in organ preservation therapy [17]. Radical surgery is the rival choice for the patients, the outcome would lead to sub-optimal quality of life because it would result in loss of voice, swallowing problem, and often a permanent tracheostomy. To achieve a better quality of life after treatment, organ preservation therapy using radiotherapy or chemoradiotherapy is recommended for early-stage disease and some advanced cases of T3 and T4 [17, 18]. The consideration of offering surgery instead of radical chemoradiotherapy for advanced cases includes patients’ condition and the extent of the disease and should be assessed by an expert panel of clinicians from different disciplines [19, 20]. Even when surgery is chosen as the treatment option, radiotherapy still has the role in providing postoperative adjuvant treatment for high-grade tumors, positive margins, cervical lymph nodes involvement, and tumor invasion beyond the larynx [21]. The prescribed dose ranged from 66 Gy to 76 Gy to the primary tumor site and involved lymph node, and the prescription for the selective lymph node with suspected microscopic involvement is at least 50 Gy [22].
Although the primary treatment of the cancer of the maxillary sinus is surgery, postoperative radiotherapy is indicated for stage 2 and stage 3 disease, and for stage 1 disease when the surgical margin is insufficient [20]. For locally advanced disease, induction chemotherapy and then concurrent chemoradiotherapy have been suggested for non-resectable patients [23]. The treatment outcome for these patients would be better if the tumor can be down-staged and subsequent resection is possible [23]. The concern of the radiotherapy to the maxillary sinus includes the preservation of the optic apparatus which are near to the tumor [20]. It has been reported that 37% of the patients who received conventional radiotherapy developed radiotherapy-induced blindness [24]. IMRT is the preferred technique. It has been reported that IMRT could significantly spare nearby organs than those in 3DCRT. The dose to the optic chiasm can be significantly reduced from over 60 Gy in 3DCRT to less than 40 Gy in IMRT [25], while the tumor coverage by the prescribed dose is increased from 83% in 3DCRT to 95% in IMRT. The prescribed dose to the primary tumor site ranged from 66 to 70 Gy.
The primary treatment for the cancer of parotid gland is surgical resection. Radiotherapy is used for adjuvant postoperative treatment except in small and low histological risk tumor with clear surgical margins [26]. In addition, radiotherapy is also indicated as radical treatment in advanced parotid gland cancer cases when resection of the tumor is not possible [27]. The prescribed dose to the primary site is about 66 Gy. IMRT is advocated as the treatment technique to improve OARs sparing [28].
As discussed, IMRT has commonly used for radiotherapy of head and neck cancers The concept of IMRT has been introduced as early as 30 years ago [29], when the method of optimizing the intensity distribution of the incident beams with the purpose to achieve the required dose distribution in the targets was described. The following points summarize the concept of the delivery of IMRT: (1) There are multiple radiation beams with specially decided nonuniform intensity in beamlets, also known as intensity modulation. (2) The multiple radiation beams are applied from different directions, and the region of the convergence of the beams can achieve the desired dose distribution based on the modulated beam intensity. (3) Calculation of the modulated beam intensity usually follows an inverse approach, in which the final dose distribution indicated by planners is used by the computer to calculate the intensity of each beamlets in the treatment field of the IMRT plan.
The delivery of intensity-modulated beams is largely contributed by the dynamic multi-leaf collimator (MLC). The MLC can change the field shape automatically and the summation of numerous sub-fields in different shapes then generate a field with intensity modulation. A simplified rationale of intensity modulation is illustrated in Figure 1. Assume there is no OAR surrounding the target, the intensity of the beam should be proportional to the target thickness from the perspective of each beam. Although beam modifying devices such as wedges and compensators have been used in 3DCRT, their flexibility of beam intensity modification is far less than that in the IMRT. This is best illustrated by the fact that IMRT can produce concave shape isodose distribution which 3DCRT can hardly generate. The freedom of intensity modulation has a great impact on the dosimetric superiority of IMRT, in which better target coverage and less dose to the OARs can be achieved.
Illustration of the relationship of beam intensity and target thickness.
The superiority of IMRT over 3DCRT is illustrated in Figure 2, which shows radiotherapy plans for NPC patients. The dose-volume histogram (DVH) and the isodose distribution show that IMRT is more capable of sparing the dose delivered to both parotid glands while delivering an adequate dose to the PTV.
Procedure of IMRT planning.
To achieve the dosimetric superiority of IMRT described in the last section, the planning procedure adopts an inverse approach. Inverse planning is a process to determine the optimal beam intensity. Numerous inverse planning approaches have been proposed and they can be classified as dose-volume based or biological index based [30]. The inverse planning procedure starts with the delineation of the regions of interest (ROI) which includes the PTV and OAR, followed by the beam configuration, objective function setting, and computer optimization. The workflow of IMRT planning is illustrated in Figure 3.
Comparisons in NPC patients with 3DCRT and IMRT plans. (a) Isodose distribution; (b) 3-dimensional dose color wash; (c) dose-volume histogram.
The procedures which require human input, including the setting of ROI delineation, beam configuration, and objective function, and evaluation of the plan are further discussed in the following sections.
Target delineation is the first and a very important step in IMRT planning to ensure effective treatment. The delineation of targets in head and neck cancers includes the high-risk, intermediate-risk, and low-risk planning target volume (PTV) [31]. The intermediate-risk PTV refers to the regional lymph nodes and the isotropic margins of the high-risk PTV, the low-risk PTV refers to selective negative lymph nodes for prophylactic treatment, and the high-risk PTV encompasses the primary tumor or tumor bed and the positive lymph nodes. The consensus guideline on the delineation of elective lymph nodes levels is well-established [32]. The guideline classifies the regional lymph nodes in the head and neck region into 10 levels and defines their anatomical boundaries. While the selection of lymph nodes levels to be treated largely depends on different oncologists’ judgment and individual patients’ conditions, there have been published guidelines to review the criteria for the lymph nodes levels selection for treatment in different types of head and neck cancers [32, 33]. Contrary to the well-established consensus in the delineation of PTV for the regional lymph nodes, the high-risk PTV delineation technique varies among oncologists. It can either be based on the isotropic expansion of the gross tumor volume or the inclusion of anatomical sub-sites [31]. The method of isotropic expansion to form PTV and the margins needed has been described [34]. The aim of the margins is to account for the uncertainties in the delivery of radiation to avoid target miss. On the other hand, the aim of the inclusion of anatomical subsites in the high-risk PTV in addition to the gross tumor volume is to include regions with possible microscopic extension [33].
The delineation of PTV is closely associated with the dose optimization regarding the skin dose. Usually, oncologists contour a clinical target volume (CTV) that covers all clinical and subclinical malignancy to be irradiated [35]. PTV, on the other hand, would add geometrical margins to CTV to ensure that the prescribed dose is adequately delivered. The CTV to PTV margins can be determined by previously reported margin recipes, accounting for systematic and random error during irradiation [36]. It is worth to note that there is a common circumstance when the head and neck cancers CTV stops just below the skin surface, i.e. no disease in the skin, while the PTV would cover the skin surface or even go beyond it after adding the CTV to PTV margins. In this case, the inverse planning procedure of IMRT would unnecessarily attempt to deliver an extra dose into the skin surface region [37], leading to excessive dose to the skin and adverse skin reactions [38]. Special attention is suggested to these cases, where the target is close to but not involving skin surface so PTV margins should be modified to avoid excessive skin surface normal tissue dose. Many imaging modalities contribute to the delineation of the target. It is important for the definition of tumor extent, the assessment of lymph nodes involvement, and the evaluation of perineural spread [39]. The common modalities include computed tomography (CT) and magnetic resonance imaging (MRI). Both CT and MRI are imaging modalities that provide sectional images with 3-dimensional reconstruction. Each of them has their unique strengths and therefore can provide complementary information in the localization of tumors and organs at risk.
Although both CT and MRI generate sectional images, their image generation mechanisms are not the same. The CT generates images using X-ray. By rotating the X-ray tube, a fan beam of X-ray is irradiated around the patients. After passing through the patient’s body and being attenuated differentially by different body tissue with various densities, the X-ray detector receives many projections from the scanned body region. The computer then generates cross-sectional images based on the information gathered from the detected X-ray projections [40]. The resultant images are shown in grayscale according to the tissue density, which can be illustrated by appearing white for bone (high density), gray for soft tissue (medium density), and black for air (low density) [40]. In addition to the visualization of internal anatomy for the diagnosis purpose, the grayscale which is derived from the CT numbers and the robust geometrical information make the CT images suitable to be used for the dose calculation in radiotherapy planning [41].
On the other hand, MRI works by detecting the reaction of the MR-active nuclei in different parts of the body, mainly hydrogen, to the magnetic fields generated by the MRI machine [42]. MR-active nuclei refer to the particles that have net spins of the protons and neutrons, which create magnetic fields on the nuclei [43]. These MR-active nuclei, therefore, react to the strong magnetic field applied by the MRI machine. The image formation is first done by the application of magnetic field to patients’ body to align the spinning axis of the MR-active nuclei in the body tissue. Then, by the application of short pulse radiofrequency, the alignment is displaced and then relaxed. This procedure, called relaxation, leads to the release of energy detected by the receiver coil [42, 44]. The two main types of relaxation are longitudinal relaxation time (T1) and transverse relaxation time (T2). T1 determines the rate of the spinning axis of the MR-active nuclei to realign to the MRI machine magnetic field, while T2 determines the rate of the MR-active nuclei to lose phase from the alignment [43]. The detection of the energy released can then be processed by computers to generate the cross-sectional images. The differences in the relaxation time (T1 or T2) and the density of the nuclei contribute to the tissue contrast in MRI images [43].
Utilization of both CT and MRI images in head and neck cancers is common because they are complementary to each other. In general, MRI is better in soft-tissue contrast while CT is better in detecting bone erosion. For example, T1 weighted MRI images are the most suitable to delineate NPC tumors because of better soft-tissue contrast and more sensitive in detecting the perineural extension of the tumor [45]. However, MRI images may fail to detect subtle skull base bone erosion, which can be complemented by coronary CT images in the bone window [46]. Also, in the cancer of the oral cavity, contrast-enhanced T1 weighted MRI images are the best for the delineation of tumor margin [47], while CT images are useful for the detection of the small lytic lesion in the cortical mandible [48].
In addition, PETCT also provides useful information to the commonly used CT and MRI images. The PETCT utilizes the mechanism of the increased uptake of the fluorodeoxyglucose (FDG) in tumor cells than in normal cells because of their higher metabolic activity [49]. The FDG uptake site can then be localized by scanners by detecting the radioactivity of the FDG. There are several circumstances that PETCT can provide supplementary information in addition to CT and MRI images. PETCT has been reported to have superior performance than CT and MRI in the detection of involved cervical lymph nodes. This is illustrated by the sensitivity of 90% and specificity of 94% in PETCT, compared with about 80% sensitivity and specificity in MRI and CT [50]. Also, PETCT is better in the detection of the unknown primary tumor, which is essential to decide the treatment regimen [51]. Furthermore, PETCT is useful in determining the presence of distant metastasis. It has the sensitivity and specificity of 89% and 95% respectively which indicates a very accurate diagnosis of the metastatic stage of the disease [52].
Inverse planning of IMRT involves the estimation of OAR dose for the calculation of the beam modulated intensity. The accuracy of the OARs delineation is crucial for the estimation of OARs dose, and hence the inverse planning procedure. There has been a consensus guideline on the OARs delineation in the head and neck regions [53]. This guideline listed the anatomical boundaries of 25 OARs in the head and neck region for the purpose of consistency in the delineation. Detailed atlas has also been supplemented for reference. Figure 4 shows part of the atlas provided by the guideline
Part of the OAR delineation atlas. Adapted from [
In the early application of IMRT, an equally spaced beam arrangement was commonly used [54, 55]. There are two other beam arrangement options available in the Eclipse treatment planning system (Varian Medical System, Palo Alto, USA). These include volumetric modulated arc therapy (VMAT) that enables rotational beams and beam angle optimization (BAO) that automatically chooses optimal static beam angles in either coplanar or non-coplanar beam arrangements.
The delivery of IMRT requires several beams to achieve the assigned dose distribution [29]. It has been a common practice to use the 5–9 beams arrangement in IMRT for head and neck cancer [55, 56]. Theoretically, a greater number of beams can have a higher chance to achieve the planned dose distribution, which increases the time for delivery and quality assurance. Hence, effort should be put to minimize the number of beams to use. Another concern in the beam placement is that opposing beams should be avoided in IMRT because it reduces the effectiveness of the optimization [57]. Furthermore, it has been calculated that the optimal number of beams is 7–9 after striking a balance between the gain in dose distribution and the expenses of treatment time in further addition of beams [58].
Selecting optimal beam orientations can help to improve the dose distribution in complex plans [59]. BAO is a function available in the Eclipse treatment planning system that a built-in algorithm can automatically choose the optimal beam arrangements in static beam IMRT. The mechanism of selecting the beams is by elimination of beams from up to 400 pre-assigned beams orientations. Then, the calculation of fluence optimization iterations can help to eliminate the beams that cause the least contribution to the pre-set objective functions until the number of desired beams is reached. Planners must customize the resulting number of beams, coplanar or non-coplanar arrangement, and the number of initial beams. Also, objective functions for each target volume and OARs must be set beforehand for the purpose of fluence optimization in the beam elimination process. The user interface of BAO is shown in Figure 5.
User interface of BAO in Eclipse treatment planning system.
VMAT is a technique that enables the delivery of IMRT in one or more rotations of the linear accelerator gantry. The delivery time is shorter than static gantry methods while maintaining at least comparable dosimetric quality [60]. It is done by simultaneous modulation of the position of the multi-leaf collimator (MLC), dose rate, and gantry speed, while the gantry is rotating around the patient during treatment. The VMAT plan optimization is done on the same user interface as the fixed beam IMRT plan, which is the photon optimizer in the Eclipse treatment planning system. While individual optimal fluence for the beam intensity modulation is optimized for the fixed beam IMRT, the VMAT optimization considers the full rotation of the gantry by dividing it into 178 equally spaced control points [61]. Assuming that the radiation from each control point is delivered from a static gantry, the optimizer then generates the information of the MLC position, dose rate, and gantry speed altogether for the dose distribution calculation. The photon optimizer user interface for the optimization of IMRT in the Eclipse treatment planning system is shown in Figure 6.
User interface of photon optimizer.
The setting of dose objective is a crucial step in inverse planning because it defines the doses to be delivered to various delineated structures. The computer then calculates the intensity modulation of the treatment field based on the definition of dose objectives [62]. While both dose-volume based objectives and biological objectives can be input in the current commercially available system, dose-volume based objectives were more commonly used. This is because it has been demonstrated that the use of generalized equivalent uniform dose (gEUD) objectives would lead to poorer homogeneities [63]. Inverse planning was first proposed in 1982 [64], in which the dose distribution was defined by planners for the calculation of beam intensity to deliver the desired dose. It is an “inverse” process when compared with the conventional “forward” approach, in which the planners define beam parameters for the calculation of dose distribution [62]. There are upper objective, lower objective and mean objective in the definition of dose-volume based objectives for a structure. A priority number is assigned for each objective to indicate their relative importance. Because the objectives to achieve target dose coverage and to avoid dose to OARs sometimes oppose to each other, the setting of priority provides information for the computer system to decide the “trade-off” between conflicting objectives.
In general, there are 3 types of dose constraints settings before the optimization. They are the PTVs, serial OARS, and parallel OARs respectively. For the PTV, it requires the setting of at least one upper objective and one lower objective as shown in Figure 7. The resultant dose-volume histogram (DVH) should show that the majority of the PTV receives the desired dose with little volume receive the higher dose, and the shape should look like a plateau at 100% volume with an extremely steep cliff at the end when it reaches the prescribed dose.
Dose constraints setting of PTV.
The dose constraints setting for serial OARs only requires an upper objective to limit its maximum dose, as shown in Figure 8.
Dose constraints setting of serial OARs.
For parallel OARs, since the dose received by the various proportion of volume is the concern for late side effects, setting of upper objectives to limit the maximum dose is not enough. It can be done by setting multiple upper objectives at different dose-volume levels or setting the mean objectives. The purpose is to limit the received dose at all volume levels and to push the DVH to its left end as much as possible. A sample objective setting for a parallel OAR is shown in Figure 9.
Dose constraints setting of parallel OARs.
Although the planning procedures are driven by treatment planning computer calculations in an inverse planning process, it is not a completely automatic procedure and there are difficulties in the planning. The difficulties in planning are largely related to the number of OARs and the geometric relationship between the PTVs and the OARs. In the optimization process of the inverse planning, it is usually not possible to achieve all the lower objectives for the PTVs while fulfilling all the upper and mean objectives for the OARs because they naturally contradict each other when the PTVs and OARs are in the vicinity [65]. In head and neck cancers, there are many OARs near to the PTVs including but not limited to the brain stem, the spinal cord, the parotid gland, and the optic nerves. Because of this, the treatment planning system optimization usually has no optimal solution that can fulfill all the set objective functions. Therefore, planners need to intervene in the procedure by evaluating the optimized treatment plans using their own experiences, and to balance the trade-off among all the nonoptimal objective functions of the PTVs and OARs.
In the evaluation of radiotherapy plan dosimetric quality, there are four main parameters to be evaluated: (1) PTV coverage, (2) OAR dose, (3) PTV homogeneity, and (4) PTV conformity [66]. PTV coverage refers to the minimum proportion of PTV covered by the prescribed dose. OAR dose is to see whether it is within the organ tolerance. PTV homogeneity is used to assess the dose uniformity within the PTV whereas PTV conformity is to evaluate whether the prescribed dose level encompasses and follows the shape of the PTV. Examples of different PTV coverage, homogeneity, and conformity situations are illustrated in Figure 10.
Examples of different PTV coverage, homogeneity, and conformity situations. The PTV is in blue solid lines and the body is in black solid lines. The purple dashed lines are the prescribed isodose and the red dashed lines are the hot spots isodose. Their respective dose-volume histograms are shown above.
The evaluation of PTV coverage and OAR dose is conducted using the dose-volume histogram (DVH). PTV homogeneity and conformity are assessed by indices known as the homogeneity index [67] and conformity index respectively [68].
As illustrated, IMRT offers the opportunity for better treatment outcome and less side effects in radiotherapy of head and neck cancers when compared with 3DCRT. A positive aspect of IMRT is that it can increase the dose conformity and homogeneity to the PTV while better sparing of the OARs [69, 70]. The following challenges are needed to be addressed for further development of the advantages of IMRT.
In the treatment planning of IMRT, the inverse planning process requires planners to define the dose limits of various PTVs and OARs for the optimization of the beam intensity modulation. This process is regarded as the setting of the objective function, which includes the dose constraints and priority of the PTVs and OARs as discussed in Section 4.5. In general, the setting of PTVs objective functions are guided by the prescription whereas those for the OARs are set according to their dose tolerance [71]. In practice, however, the objectives for OARs sparing are often in conflict with the objectives to achieve PTV dose coverage [72]. This is because OARs and PTVs are often in close proximity and sometimes may even overlap one another. In this condition, we may have to deliver OARs doses that are close to or even higher than their dose tolerance in order to achieve PTV adequate dose coverage. On the contrary, when the OARs are far from the PTV, the actual OARs dose would be well below their tolerance. It is logical to deduce that the OARs dose is related to their anatomical relationship with PTVs, and this relationship varies greatly among different patients.
Knowledge-based radiotherapy planning has recently emerged as rapidly developing area with the aim to improve the IMRT planning process [73]. Knowledge-based planning refers to the strategy to incorporate past plans data (known as knowledge) into the treatment planning process. Six different categories of purpose in knowledge-based planning have been summarized in a review article, which includes (1) the determination of DVH, (2) specific dose metrics, (3) voxel-level doses, (4) objective function weights, (5) beam parameters and (6) quality assurance metrics [73]. The development of knowledge-based radiotherapy planning enables planners to determine the setting of objective functions in a more systematic approach, less dependent on personal experience, and therefore higher consistency of plan qualities.
The technology of delivering 4pi VMAT is emerging. 4pi radiotherapy refers to the incorporation of beams distributed on the imaginary isotropically expanded spherical surface around the iso-center during plan optimization [74]. The 4pi VMAT can be delivered by non-coplanar arc beams using a static couch or synchronizing the arc rotation of the gantry with a rotating couch [75, 76]. It has been shown that 4pi VMAT has the potential to further decrease the dose to OARs compared with coplanar VMAT. For example, a study on head and neck cancers reported that the mean Dmax to the brain stem and spinal were decreased by 6 Gy and 3.8 Gy respectively using 4pi VMAT [77]. In addition, the method of delivering 4pi VMAT with synchronized gantry and couch rotation enabled more sophisticated arc trajectories compared with the static couch method. It was expected to deliver a highly conformed dose to the PTV with a reduction of OARs dose and 50% isodose volume in the patient body [76]. Although the treatment time will increase by 30% in current linear accelerators compared with coplanar VMAT [75], the potential of 4pi VMAT can be unleashed with the advancement of the future linear accelerators with automatic couch and gantry motion capabilities for faster 4pi VMAT delivery [78].
IMRT offers the possibility to escalate the dose to the tumor because of its better ability to spare the OARs. In fact, dose-escalation has already been implemented in IMRT in the treatment of NPC when the gross tumor dose was raised from 66 Gy in conventional radiotherapy to about 70 Gy [79]. NPC is known for its radio-sensitivity and the existence of dose-tumor-control relationship beyond routine cancericidal dose [80], hence increasing the dose to the tumor volume is able to increase the local control rate. It has been reported that in the group of predominantly locally advanced NPC (T3-4 N0-1), 61.8% of the failure was caused by local relapse [81]. Another study also revealed that 80% of the recurrent cases had the relapse sites at the region delivered with the median dose of 70.4 Gy in the previous treatment [82]. Clinical investigations on the dose escalation in the treatment of NPC using external beam radiotherapy [83] and brachytherapy have been reported [84]. Although it has shown good local control and survival in both reports, treatment side effects were the concern. For example, grade 3 mucositis was observed in about 80% of the cases [83]. Also, by assessing the acute toxicity, it has been suggested that the maximal tolerable dose in IMRT of head and neck cancers was 2.36 Gy per fraction to a total of 70.8 Gy [85].
Radiomics refers to the extraction of features in the regions of interest (ROI) from medical images [86]. The extracted features can be the image voxel intensity, ROI texture and shape features, etc. [87] These extracted radiomics features can be used to correlate with clinical data such as recurrence and metastasis status of patients, so as to develop tools for predicting treatment outcome in future patients based on individual patients’ image radiomics features. Research articles have been published to evaluate the chance of local recurrence in NPC patients, and it was reported that local recurrence can be predicted using pre-treatment imaging with a concordance index of over 0.8 [88, 89]. The future direction could be to incorporate radiomics study for more accurate and individualized patient selection instead of based on their staging. With the attempt to generate own local recurrence prediction model based on radiomics features, NPC patients indicated for GTV dose escalation could be more accurately identified.
Radiotherapy is necessary for the treatment of various head and neck cancers either as a primary treatment or adjuvant treatment after surgery to cure the disease. To achieve optimal radiotherapy treatment, we need to understand the rationale of IMRT and the procedure of treatment planning. With the help of treatment planning computer, inverse planning procedure can accomplish treatment plans with highly conformal radiation dose to PTV and dose avoidance from OARs. Because of the conflicting nature of the 2 major dosimetric goals: high PTV dose and low nearby OARs dose, the optimal radiotherapy treatment is usually achieved by experienced planners who are able to carefully balance the trade-off between the conflicting goals. Nevertheless, the present development of knowledge-based planning could provide a guidance for planners to decide the trade-off in a more objective manner. In addition, the development of 4-pi VMAT and research of radiomics may strengthen the advantage of IMRT in terms of OARs sparing and tumor dose escalation.
"Open access contributes to scientific excellence and integrity. It opens up research results to wider analysis. It allows research results to be reused for new discoveries. And it enables the multi-disciplinary research that is needed to solve global 21st century problems. Open access connects science with society. It allows the public to engage with research. To go behind the headlines. And look at the scientific evidence. And it enables policy makers to draw on innovative solutions to societal challenges".
\n\nCarlos Moedas, the European Commissioner for Research Science and Innovation at the STM Annual Frankfurt Conference, October 2016.
",metaTitle:"About Open Access",metaDescription:"Open access contributes to scientific excellence and integrity. It opens up research results to wider analysis. It allows research results to be reused for new discoveries. And it enables the multi-disciplinary research that is needed to solve global 21st century problems. Open access connects science with society. It allows the public to engage with research. To go behind the headlines. And look at the scientific evidence. And it enables policy makers to draw on innovative solutions to societal challenges.\n\nCarlos Moedas, the European Commissioner for Research Science and Innovation at the STM Annual Frankfurt Conference, October 2016.",metaKeywords:null,canonicalURL:"about-open-access",contentRaw:'[{"type":"htmlEditorComponent","content":"The Open Access publishing movement started in the early 2000s when academic leaders from around the world participated in the formation of the Budapest Initiative. They developed recommendations for an Open Access publishing process, “which has worked for the past decade to provide the public with unrestricted, free access to scholarly research—much of which is publicly funded. Making the research publicly available to everyone—free of charge and without most copyright and licensing restrictions—will accelerate scientific research efforts and allow authors to reach a larger number of readers” (reference: http://www.budapestopenaccessinitiative.org)
\\n\\nIntechOpen’s co-founders, both scientists themselves, created the company while undertaking research in robotics at Vienna University. Their goal was to spread research freely “for scientists, by scientists’ to the rest of the world via the Open Access publishing model. The company soon became a signatory of the Budapest Initiative, which currently has more than 1000 supporting organizations worldwide, ranging from universities to funders.
\\n\\nAt IntechOpen today, we are still as committed to working with organizations and people who care about scientific discovery, to putting the academic needs of the scientific community first, and to providing an Open Access environment where scientists can maximize their contribution to scientific advancement. By opening up access to the world’s scientific research articles and book chapters, we aim to facilitate greater opportunity for collaboration, scientific discovery and progress. We subscribe wholeheartedly to the Open Access definition:
\\n\\n“By “open access” to [peer-reviewed research literature], we mean its free availability on the public internet, permitting any users to read, download, copy, distribute, print, search, or link to the full texts of these articles, crawl them for indexing, pass them as data to software, or use them for any other lawful purpose, without financial, legal, or technical barriers other than those inseparable from gaining access to the internet itself. The only constraint on reproduction and distribution, and the only role for copyright in this domain, should be to give authors control over the integrity of their work and the right to be properly acknowledged and cited” (reference: http://www.budapestopenaccessinitiative.org)
\\n\\nOAI-PMH
\\n\\nAs a firm believer in the wider dissemination of knowledge, IntechOpen supports the Open Access Initiative Protocol for Metadata Harvesting (OAI-PMH Version 2.0). Read more
\\n\\nLicense
\\n\\nBook chapters published in edited volumes are distributed under the Creative Commons Attribution 3.0 Unported License (CC BY 3.0). IntechOpen upholds a very flexible Copyright Policy. There is no copyright transfer to the publisher and Authors retain exclusive copyright to their work. All Monographs/Compacts are distributed under the Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0). Read more
\\n\\nPeer Review Policies
\\n\\nAll scientific works are Peer Reviewed prior to publishing. Read more
\\n\\nOA Publishing Fees
\\n\\nThe Open Access publishing model employed by IntechOpen eliminates subscription charges and pay-per-view fees, enabling readers to access research at no cost. In order to sustain operations and keep our publications freely accessible we levy an Open Access Publishing Fee for manuscripts, which helps us cover the costs of editorial work and the production of books. Read more
\\n\\nDigital Archiving Policy
\\n\\nIntechOpen is committed to ensuring the long-term preservation and the availability of all scholarly research we publish. We employ a variety of means to enable us to deliver on our commitments to the scientific community. Apart from preservation by the Croatian National Library (for publications prior to April 18, 2018) and the British Library (for publications after April 18, 2018), our entire catalogue is preserved in the CLOCKSS archive.
\\n\\nOpen Science is transparent and accessible knowledge that is shared and developed through collaborative networks.
\\n\\nOpen Science is about increased rigour, accountability, and reproducibility for research. It is based on the principles of inclusion, fairness, equity, and sharing, and ultimately seeks to change the way research is done, who is involved and how it is valued. It aims to make research more open to participation, review/refutation, improvement and (re)use for the world to benefit.
\\n\\nOpen Science refers to doing traditional science with more transparency involved at various stages, for example by openly sharing code and data. It implies a growing set of practices - within different disciplines - aiming at:
\\n\\nWe aim at improving the quality and availability of scholarly communication by promoting and practicing:
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The Open Access publishing movement started in the early 2000s when academic leaders from around the world participated in the formation of the Budapest Initiative. They developed recommendations for an Open Access publishing process, “which has worked for the past decade to provide the public with unrestricted, free access to scholarly research—much of which is publicly funded. Making the research publicly available to everyone—free of charge and without most copyright and licensing restrictions—will accelerate scientific research efforts and allow authors to reach a larger number of readers” (reference: http://www.budapestopenaccessinitiative.org)
\n\nIntechOpen’s co-founders, both scientists themselves, created the company while undertaking research in robotics at Vienna University. Their goal was to spread research freely “for scientists, by scientists’ to the rest of the world via the Open Access publishing model. The company soon became a signatory of the Budapest Initiative, which currently has more than 1000 supporting organizations worldwide, ranging from universities to funders.
\n\nAt IntechOpen today, we are still as committed to working with organizations and people who care about scientific discovery, to putting the academic needs of the scientific community first, and to providing an Open Access environment where scientists can maximize their contribution to scientific advancement. By opening up access to the world’s scientific research articles and book chapters, we aim to facilitate greater opportunity for collaboration, scientific discovery and progress. We subscribe wholeheartedly to the Open Access definition:
\n\n“By “open access” to [peer-reviewed research literature], we mean its free availability on the public internet, permitting any users to read, download, copy, distribute, print, search, or link to the full texts of these articles, crawl them for indexing, pass them as data to software, or use them for any other lawful purpose, without financial, legal, or technical barriers other than those inseparable from gaining access to the internet itself. The only constraint on reproduction and distribution, and the only role for copyright in this domain, should be to give authors control over the integrity of their work and the right to be properly acknowledged and cited” (reference: http://www.budapestopenaccessinitiative.org)
\n\nOAI-PMH
\n\nAs a firm believer in the wider dissemination of knowledge, IntechOpen supports the Open Access Initiative Protocol for Metadata Harvesting (OAI-PMH Version 2.0). Read more
\n\nLicense
\n\nBook chapters published in edited volumes are distributed under the Creative Commons Attribution 3.0 Unported License (CC BY 3.0). IntechOpen upholds a very flexible Copyright Policy. There is no copyright transfer to the publisher and Authors retain exclusive copyright to their work. All Monographs/Compacts are distributed under the Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0). Read more
\n\nPeer Review Policies
\n\nAll scientific works are Peer Reviewed prior to publishing. Read more
\n\nOA Publishing Fees
\n\nThe Open Access publishing model employed by IntechOpen eliminates subscription charges and pay-per-view fees, enabling readers to access research at no cost. In order to sustain operations and keep our publications freely accessible we levy an Open Access Publishing Fee for manuscripts, which helps us cover the costs of editorial work and the production of books. Read more
\n\nDigital Archiving Policy
\n\nIntechOpen is committed to ensuring the long-term preservation and the availability of all scholarly research we publish. We employ a variety of means to enable us to deliver on our commitments to the scientific community. Apart from preservation by the Croatian National Library (for publications prior to April 18, 2018) and the British Library (for publications after April 18, 2018), our entire catalogue is preserved in the CLOCKSS archive.
\n\nOpen Science is transparent and accessible knowledge that is shared and developed through collaborative networks.
\n\nOpen Science is about increased rigour, accountability, and reproducibility for research. It is based on the principles of inclusion, fairness, equity, and sharing, and ultimately seeks to change the way research is done, who is involved and how it is valued. It aims to make research more open to participation, review/refutation, improvement and (re)use for the world to benefit.
\n\nOpen Science refers to doing traditional science with more transparency involved at various stages, for example by openly sharing code and data. It implies a growing set of practices - within different disciplines - aiming at:
\n\nWe aim at improving the quality and availability of scholarly communication by promoting and practicing:
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On September, 29th 2006 he has won a post PhD fellowship from the university of Bologna (from October 2006 to October 2008), at the competitive examination he was ranked first in the industrial engineering area. He extensively served as referee for several international journals. He is author/coauthor of more than 100 research papers. He has been involved in some projects supported by MURST and European Community. 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Delac received his B.Sc.E.E. degree in 2003 and is currentlypursuing a Ph.D. degree at the University of Zagreb, Faculty of Electrical Engineering andComputing. His current research interests are digital image analysis, pattern recognition andbiometrics.",institutionString:null,institution:{name:"University of Zagreb",country:{name:"Croatia"}}},{id:"557",title:"Dr.",name:"Andon",middleName:"Venelinov",surname:"Topalov",slug:"andon-topalov",fullName:"Andon Topalov",position:null,profilePictureURL:"https://mts.intechopen.com/storage/users/557/images/1927_n.jpg",biography:"Dr. Andon V. Topalov received the MSc degree in Control Engineering from the Faculty of Information Systems, Technologies, and Automation at Moscow State University of Civil Engineering (MGGU) in 1979. He then received his PhD degree in Control Engineering from the Department of Automation and Remote Control at Moscow State Mining University (MGSU), Moscow, in 1984. From 1985 to 1986, he was a Research Fellow in the Research Institute for Electronic Equipment, ZZU AD, Plovdiv, Bulgaria. In 1986, he joined the Department of Control Systems, Technical University of Sofia at the Plovdiv campus, where he is presently a Full Professor. He has held long-term visiting Professor/Scholar positions at various institutions in South Korea, Turkey, Mexico, Greece, Belgium, UK, and Germany. And he has coauthored one book and authored or coauthored more than 80 research papers in conference proceedings and journals. 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Aalborg University has Two Satellite Campuses, one in Copenhagen (Aalborg University Copenhagen) and the other in Esbjerg (Aalborg University Esbjerg).\n· He is a member of prestigious IEEE (Institute of Electrical and Electronics Engineers), and IAENG (International Association of Engineers) organizations. \n· He is the chief Editor of the Journal of Software Engineering.\n· He is the member of the Editorial Board of International Journal of Computer Science and Software Technology (IJCSST) and International Journal of Computer Engineering and Information Technology. \n· He is also the Editor of Communication in Computer and Information Science CCIS-20 by Springer.\n· Reviewer For Many Conferences\nHe is the lead person in making collaboration agreements between Aalborg University and many universities of Pakistan, for which the MOU’s (Memorandum of Understanding) have been signed.\nProfessor Akbar is working in Academia since 1990, he started his career as a Lab demonstrator/TA at the University of Sussex. After finishing his P. hD degree in 1992, he served in the Industry as a Scientific Officer and continued his academic career as a visiting scholar for a number of educational institutions. In 1996 he joined National University of Science & Technology Pakistan (NUST) as an Associate Professor; NUST is one of the top few universities in Pakistan. In 1999 he joined an International Company Lineo Inc, Canada as Manager Compiler Group, where he headed the group for developing Compiler Tool Chain and Porting of Operating Systems for the BLACKfin processor. The processor development was a joint venture by Intel and Analog Devices. In 2002 Lineo Inc., was taken over by another company, so he joined Aalborg University Denmark as an Assistant Professor.\nProfessor Akbar has truly a multi-disciplined career and he continued his legacy and making progress in many areas of his interests both in teaching and research. 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These cells were first recognized by Elia Metchnikoff in 1882 in the larvae of starfish upon insertion of thorns of tangerine tree and later in Daphnia magna or common water flea infected with fungal spores as cells responsible for the process of phagocytosis of foreign particles. Elia Metchnikoff received the Noble prize (Physiology and Medicine) for his discovery and describing the process of phagocytosis in 1908. More than 130 years have passed and different subtypes and roles of macrophages as innate immune cells have been established by the researchers. In addition to their immunoregulatory role in immune homeostasis and pathogenic infection, they also play a crucial role in the pathogenesis of sterile inflammatory conditions including autoimmunity, obesity, and cancer. The present chapter describes the immunoregulatory role of macrophages in the homeostasis and inflammatory diseases varying from autoimmunity to metabolic diseases including obesity.",book:{id:"8590",slug:"macrophage-activation-biology-and-disease",title:"Macrophage Activation",fullTitle:"Macrophage Activation - Biology and Disease"},signatures:"Vijay Kumar",authors:[{id:"63844",title:"Dr.",name:"Vijay",middleName:null,surname:"Kumar",slug:"vijay-kumar",fullName:"Vijay Kumar"}]},{id:"67289",doi:"10.5772/intechopen.86474",title:"The Pivotal Role of Macrophages in Metabolic Distress",slug:"the-pivotal-role-of-macrophages-in-metabolic-distress",totalDownloads:1230,totalCrossrefCites:2,totalDimensionsCites:4,abstract:"Obesity is a prevalent condition with several associated co-morbidities including the development of metabolic diseases. In obesity there is immune cell infiltration into the white adipose tissue and this is associated with the generation of inflammation and insulin resistance (IR). A large majority of the infiltrating leukocytes in obese adipose tissue are pro-inflammatory macrophages, which upon activation induce a switch in metabolism from oxidative phosphorylation, as is utilised by macrophages in lean adipose tissue, towards aerobic glycolysis. The signalling pathways evoked in the recruited macrophages induce the release of pro-inflammatory cytokines, in signalling pathways which directly interfere with insulin signalling and thus induce a state of IR. As macrophages appear to play such a pivotal role in the generation of IR and are the largest leukocyte population in the adipose tissue, they provide a promising therapeutic target. Indeed, there are several strategies currently being studied to induce a ‘switch’ in macrophages associated with obese adipose tissue, towards the phenotype of those associated with lean adipose tissue, with arguably the most promising being those strategies designed to target the metabolic pathways within the macrophages. This chapter will discuss the polarisation and activation of macrophages within lean and obese adipose tissue and how these cells can be targeted therapeutically.",book:{id:"8590",slug:"macrophage-activation-biology-and-disease",title:"Macrophage Activation",fullTitle:"Macrophage Activation - Biology and Disease"},signatures:"Joseph Roberts, Padraic G. Fallon and Emily Hams",authors:null},{id:"64543",doi:"10.5772/intechopen.81995",title:"Cannabinoid Receptors as Regulators of Neutrophil Activity in Inflammatory Diseases",slug:"cannabinoid-receptors-as-regulators-of-neutrophil-activity-in-inflammatory-diseases",totalDownloads:1115,totalCrossrefCites:4,totalDimensionsCites:4,abstract:"Cannabinoids are compounds present in Cannabis sativa (phytocannabinoids), endogenously produced (endocannabinoids) or synthesized, that bind to G protein-coupled receptors named cannabinoid receptors B1 and B2. They were first described as psychotropic compounds; however, cannabinoids are also potent immunoregulatory agents. Cannabinoids can modulate neutrophil activity in sterile and infectious inflammatory diseases. Concerning sterile inflammatory diseases as arthritis, ischemic diseases, and colitis, the use of CB2 agonist impairs the intracellular signaling pathways involved in the production of inflammatory mediators and expression of adhesion molecules. As a consequence, neutrophils did not release metalloproteinases either to adhere to endothelial cells, resulting in reduced tissue damage. A similar anti-inflammatory CB2 agonist mechanism of action in sepsis and mycobacterial infection models is observed. However, it is not clear if inflammation resolution promoted by cannabinoid treatment during infection is also related to microbial viability. Despite the growing literature showing the effects of cannabinoids on neutrophils, there are still some gaps that should be filled before proposing cannabinoid-based drugs to treat neutrophil-dependent diseases.",book:{id:"7129",slug:"neutrophils",title:"Neutrophils",fullTitle:"Neutrophils"},signatures:"Mariana Conceição Souza and Elaine Cruz Rosas",authors:null},{id:"68678",doi:"10.5772/intechopen.88754",title:"Macrophages in the Pathogenesis of Leprosy",slug:"macrophages-in-the-pathogenesis-of-leprosy",totalDownloads:881,totalCrossrefCites:1,totalDimensionsCites:3,abstract:"Leprosy is a chronic infectious disease caused by the intracellular pathogen Mycobacterium leprae. The disease may present different clinical forms depending on the immunological status of the host. M. leprae may infect macrophages and Schwann cells, and recent studies have demonstrated that macrophages are fundamental cells for determining the outcome of the disease. Skin lesions from patients with the paucibacillary form of the disease present a predominance of macrophages with a pro-inflammatory phenotype (M1), whereas skin lesions of multibacillary patients present a predominance of anti-inflammatory macrophages (M2). More recently, it was shown that autophagy is responsible for the control of bacillary load in paucibacillary macrophages and that the blockade of autophagy is involved in the onset of acute inflammatory reactional episodes in multibacillary cells. So, strategies that aim to induce autophagy in infected macrophages are promising not only to improve the efficacy of multidrug therapy (MDT) but also to avoid the occurrence of reactional episodes that are responsible for the disabilities observed in leprosy patients.",book:{id:"8590",slug:"macrophage-activation-biology-and-disease",title:"Macrophage Activation",fullTitle:"Macrophage Activation - Biology and Disease"},signatures:"Rhana Berto da Silva Prata, Mayara Garcia de Mattos Barbosa, Bruno Jorge de Andrade Silva, Jéssica Araujo da Paixão de Oliveira, Tamiris Lameira Bittencourt and Roberta Olmo Pinheiro",authors:null},{id:"67817",doi:"10.5772/intechopen.86433",title:"Wnt Signaling Regulates Macrophage Mediated Immune Response to Pathogens",slug:"wnt-signaling-regulates-macrophage-mediated-immune-response-to-pathogens",totalDownloads:994,totalCrossrefCites:0,totalDimensionsCites:2,abstract:"Infection with pathogenic microbes is a global threat. Macrophages play a fundamental role in promoting host resistance to deadly infections from pathogenic microbes by virtue of a well-orchestrated immune defense system. Phagocytosis and obliteration of invading pathogens by macrophages are an innate immune function that not only sustains immune homeostasis but also bolsters adaptive immune response through antigen processing and presentation. Wnt signaling, where Wnt, a secreted glycoprotein which interacts with Frizzled and ROR cell surface receptors to initiate cellular interactions, could be vital for the immune response executed and propagated by macrophages in both innate and adaptive immune responses. The goal of this chapter is to describe how Wnt signaling influences phagocytosis, autophagy, and transcriptional activation to enable the macrophage to exercise its immune response program to resist infection.",book:{id:"8590",slug:"macrophage-activation-biology-and-disease",title:"Macrophage Activation",fullTitle:"Macrophage Activation - Biology and Disease"},signatures:"Suborno Jati and Malini Sen",authors:null}],mostDownloadedChaptersLast30Days:[{id:"68185",title:"Macrophages: The Potent Immunoregulatory Innate Immune Cells",slug:"macrophages-the-potent-immunoregulatory-innate-immune-cells",totalDownloads:2173,totalCrossrefCites:16,totalDimensionsCites:30,abstract:"Macrophages are ubiquitously present innate immune cells in humans and animals belonging to both invertebrates and vertebrates. These cells were first recognized by Elia Metchnikoff in 1882 in the larvae of starfish upon insertion of thorns of tangerine tree and later in Daphnia magna or common water flea infected with fungal spores as cells responsible for the process of phagocytosis of foreign particles. Elia Metchnikoff received the Noble prize (Physiology and Medicine) for his discovery and describing the process of phagocytosis in 1908. More than 130 years have passed and different subtypes and roles of macrophages as innate immune cells have been established by the researchers. In addition to their immunoregulatory role in immune homeostasis and pathogenic infection, they also play a crucial role in the pathogenesis of sterile inflammatory conditions including autoimmunity, obesity, and cancer. The present chapter describes the immunoregulatory role of macrophages in the homeostasis and inflammatory diseases varying from autoimmunity to metabolic diseases including obesity.",book:{id:"8590",slug:"macrophage-activation-biology-and-disease",title:"Macrophage Activation",fullTitle:"Macrophage Activation - Biology and Disease"},signatures:"Vijay Kumar",authors:[{id:"63844",title:"Dr.",name:"Vijay",middleName:null,surname:"Kumar",slug:"vijay-kumar",fullName:"Vijay Kumar"}]},{id:"68585",title:"Macrophage Polarization Is Decisive for Chronic Bacterial Infection-Induced Carcinogenesis",slug:"macrophage-polarization-is-decisive-for-chronic-bacterial-infection-induced-carcinogenesis",totalDownloads:809,totalCrossrefCites:0,totalDimensionsCites:0,abstract:"Macrophages are the special cells of the immune system and play both immunological and physiological role. One of the peculiar characteristics of macrophages is that they are double-edged and highly plastic component of immune system. Due to this characteristic, they are responsible for both progressions as well control of a variety of inflammatory, infectious and metabolic diseases and cancer. These are found in the body in three major phenotypes, which are known as M0 (also known as naïve); M1 (classically activated macrophages); and/or M2 (alternatively activated macrophages) at normal physiological conditions. We have been exploring macrophages in context of bacterial infection and previously demonstrated that M2 polarization of M1 effector alveolar macrophages during chronic/persistent Chlamydia pneumonia, Mycobacterium tuberculosis and Helicobacter pylori pathogens are decisive for the infection induced cancer development in host. Since chronic infection with these pathogens has been associated with adenocarcinoma, therefore, we feel that disruption of macrophage plasticity plays crucial role in the host for the development of cancer. On the basis of this, we propose that in such pathological conditions, management of M1/M2 imbalance is paramount for minimizing the risk of developing cancer by chronic and persistent infection.",book:{id:"8590",slug:"macrophage-activation-biology-and-disease",title:"Macrophage Activation",fullTitle:"Macrophage Activation - Biology and Disease"},signatures:"Mishi Wasson, Sonia Kapoor, Manoj Garg, Sandhya Singh and Hridayesh Prakash",authors:null},{id:"64543",title:"Cannabinoid Receptors as Regulators of Neutrophil Activity in Inflammatory Diseases",slug:"cannabinoid-receptors-as-regulators-of-neutrophil-activity-in-inflammatory-diseases",totalDownloads:1115,totalCrossrefCites:4,totalDimensionsCites:4,abstract:"Cannabinoids are compounds present in Cannabis sativa (phytocannabinoids), endogenously produced (endocannabinoids) or synthesized, that bind to G protein-coupled receptors named cannabinoid receptors B1 and B2. They were first described as psychotropic compounds; however, cannabinoids are also potent immunoregulatory agents. Cannabinoids can modulate neutrophil activity in sterile and infectious inflammatory diseases. Concerning sterile inflammatory diseases as arthritis, ischemic diseases, and colitis, the use of CB2 agonist impairs the intracellular signaling pathways involved in the production of inflammatory mediators and expression of adhesion molecules. As a consequence, neutrophils did not release metalloproteinases either to adhere to endothelial cells, resulting in reduced tissue damage. A similar anti-inflammatory CB2 agonist mechanism of action in sepsis and mycobacterial infection models is observed. However, it is not clear if inflammation resolution promoted by cannabinoid treatment during infection is also related to microbial viability. Despite the growing literature showing the effects of cannabinoids on neutrophils, there are still some gaps that should be filled before proposing cannabinoid-based drugs to treat neutrophil-dependent diseases.",book:{id:"7129",slug:"neutrophils",title:"Neutrophils",fullTitle:"Neutrophils"},signatures:"Mariana Conceição Souza and Elaine Cruz Rosas",authors:null},{id:"63248",title:"Neutrophil Activation by Antibody Receptors",slug:"neutrophil-activation-by-antibody-receptors",totalDownloads:1380,totalCrossrefCites:1,totalDimensionsCites:2,abstract:"Neutrophils, the most abundant leukocytes in blood, are relevant cells of both the innate and the adaptive immune system. Immunoglobulin (Ig) G antibody molecules are crucial activators of neutrophils. IgGs identify many types of pathogens via their two Fab portions and are in turn detected through their Fc portion by specific Fcγ receptors (FcγRs) on the membrane of neutrophils. Thus, antibodies bring the specificity of the adaptive immune response to the potent antimicrobial and inflammatory functions of neutrophils. Two types of FcγRs with several polymorphic variants exist on the human neutrophil. These receptors are considered to be redundant in inducing cell responses. Yet, new evidence presented in recent years on how the particular IgG subclass and the glycosylation pattern of the antibody modulate the IgG–FcγR interaction has suggested that a particular effector function may in fact be activated in response to a specific type of FcγR. In this chapter, we describe the main types of FcγRs on neutrophils and our current view on how particular FcγRs activate various signaling pathways to promote unique effector cell functions, including phagocytosis, activation of integrins, nuclear factor activation, and formation of neutrophil extracellular traps (NETs).",book:{id:"7129",slug:"neutrophils",title:"Neutrophils",fullTitle:"Neutrophils"},signatures:"Carlos Rosales and Eileen Uribe-Querol",authors:[{id:"192432",title:"Dr.",name:"Carlos",middleName:null,surname:"Rosales",slug:"carlos-rosales",fullName:"Carlos Rosales"},{id:"198687",title:"Dr.",name:"Eileen",middleName:null,surname:"Uribe-Querol",slug:"eileen-uribe-querol",fullName:"Eileen Uribe-Querol"}]},{id:"67326",title:"Polarization of Tumor-Associated Macrophages by Chinese Medicine Intervention: Mechanisms and Applications",slug:"polarization-of-tumor-associated-macrophages-by-chinese-medicine-intervention-mechanisms-and-applica",totalDownloads:935,totalCrossrefCites:0,totalDimensionsCites:0,abstract:"Macrophage polarization is a spectrum of phenotypes and generally can be classified into two states: (1) classically activated or M1 macrophages, which can be driven by lipopolysaccharide (LPS) alone or in association with Th1 cytokines and produce pro-inflammatory cytokines such as TNF-α, IL-6 and, IL-12, and (2) alternatively activated M2 macrophages, which can be promoted by Th2 mediators IL-4 and IL-13 and produce anti-inflammatory cytokines such as TGF-β and IL-10. Current studies have found that the phenotypic switch between M1 and M2 macrophages governs the fate of an organ in inflammation or injury. The imbalance of M1/M2 polarization is closely involved in various pathological processes and is becoming a potential target for therapeutic strategies. Traditional Chinese medicine is an integrated healthcare system composed of many practices and is characterized by multi-target, multi-level, and coordinated intervention effects. Chinese medicines nowadays are applied to regulate phenotype polarization of macrophages to improve the microenvironment, thus ameliorating or even eliminating the symptoms. In this chapter, we will discuss the molecular mechanisms of macrophage polarization, their roles in health and disease, and the intervention with Chinese medicines to modulate the polarization of macrophages in tumor microenvironment (TME) for therapeutic purpose.",book:{id:"8590",slug:"macrophage-activation-biology-and-disease",title:"Macrophage Activation",fullTitle:"Macrophage Activation - Biology and Disease"},signatures:"Yuanjun Lu, Hor Yue Tan, Ning Wang and Yibin Feng",authors:[{id:"14428",title:"Prof.",name:"Yibin",middleName:null,surname:"Feng",slug:"yibin-feng",fullName:"Yibin Feng"}]}],onlineFirstChaptersFilter:{topicId:"904",limit:6,offset:0},onlineFirstChaptersCollection:[],onlineFirstChaptersTotal:0},preDownload:{success:null,errors:{}},subscriptionForm:{success:null,errors:{}},aboutIntechopen:{},privacyPolicy:{},peerReviewing:{},howOpenAccessPublishingWithIntechopenWorks:{},sponsorshipBooks:{sponsorshipBooks:[],offset:0,limit:8,total:null},allSeries:{pteSeriesList:[{id:"14",title:"Artificial Intelligence",numberOfPublishedBooks:9,numberOfPublishedChapters:87,numberOfOpenTopics:6,numberOfUpcomingTopics:0,issn:"2633-1403",doi:"10.5772/intechopen.79920",isOpenForSubmission:!0},{id:"7",title:"Biomedical Engineering",numberOfPublishedBooks:12,numberOfPublishedChapters:98,numberOfOpenTopics:3,numberOfUpcomingTopics:0,issn:"2631-5343",doi:"10.5772/intechopen.71985",isOpenForSubmission:!0}],lsSeriesList:[{id:"11",title:"Biochemistry",numberOfPublishedBooks:27,numberOfPublishedChapters:288,numberOfOpenTopics:4,numberOfUpcomingTopics:0,issn:"2632-0983",doi:"10.5772/intechopen.72877",isOpenForSubmission:!0},{id:"25",title:"Environmental Sciences",numberOfPublishedBooks:1,numberOfPublishedChapters:9,numberOfOpenTopics:4,numberOfUpcomingTopics:0,issn:"2754-6713",doi:"10.5772/intechopen.100362",isOpenForSubmission:!0},{id:"10",title:"Physiology",numberOfPublishedBooks:11,numberOfPublishedChapters:139,numberOfOpenTopics:4,numberOfUpcomingTopics:0,issn:"2631-8261",doi:"10.5772/intechopen.72796",isOpenForSubmission:!0}],hsSeriesList:[{id:"3",title:"Dentistry",numberOfPublishedBooks:8,numberOfPublishedChapters:129,numberOfOpenTopics:0,numberOfUpcomingTopics:2,issn:"2631-6218",doi:"10.5772/intechopen.71199",isOpenForSubmission:!1},{id:"6",title:"Infectious Diseases",numberOfPublishedBooks:13,numberOfPublishedChapters:107,numberOfOpenTopics:3,numberOfUpcomingTopics:1,issn:"2631-6188",doi:"10.5772/intechopen.71852",isOpenForSubmission:!0},{id:"13",title:"Veterinary Medicine and Science",numberOfPublishedBooks:10,numberOfPublishedChapters:103,numberOfOpenTopics:3,numberOfUpcomingTopics:0,issn:"2632-0517",doi:"10.5772/intechopen.73681",isOpenForSubmission:!0}],sshSeriesList:[{id:"22",title:"Business, Management and Economics",numberOfPublishedBooks:1,numberOfPublishedChapters:12,numberOfOpenTopics:2,numberOfUpcomingTopics:1,issn:"2753-894X",doi:"10.5772/intechopen.100359",isOpenForSubmission:!0},{id:"23",title:"Education and Human Development",numberOfPublishedBooks:0,numberOfPublishedChapters:0,numberOfOpenTopics:2,numberOfUpcomingTopics:0,issn:null,doi:"10.5772/intechopen.100360",isOpenForSubmission:!1},{id:"24",title:"Sustainable Development",numberOfPublishedBooks:0,numberOfPublishedChapters:11,numberOfOpenTopics:4,numberOfUpcomingTopics:1,issn:null,doi:"10.5772/intechopen.100361",isOpenForSubmission:!0}],testimonialsList:[{id:"6",text:"It is great to work with the IntechOpen to produce a worthwhile collection of research that also becomes a great educational resource and guide for future research endeavors.",author:{id:"259298",name:"Edward",surname:"Narayan",institutionString:null,profilePictureURL:"https://mts.intechopen.com/storage/users/259298/images/system/259298.jpeg",slug:"edward-narayan",institution:{id:"3",name:"University of Queensland",country:{id:null,name:"Australia"}}}},{id:"13",text:"The collaboration with and support of the technical staff of IntechOpen is fantastic. The whole process of submitting an article and editing of the submitted article goes extremely smooth and fast, the number of reads and downloads of chapters is high, and the contributions are also frequently cited.",author:{id:"55578",name:"Antonio",surname:"Jurado-Navas",institutionString:null,profilePictureURL:"https://s3.us-east-1.amazonaws.com/intech-files/0030O00002bRisIQAS/Profile_Picture_1626166543950",slug:"antonio-jurado-navas",institution:{id:"720",name:"University of Malaga",country:{id:null,name:"Spain"}}}}]},series:{item:{id:"11",title:"Biochemistry",doi:"10.5772/intechopen.72877",issn:"2632-0983",scope:"Biochemistry, the study of chemical transformations occurring within living organisms, impacts all areas of life sciences, from molecular crystallography and genetics to ecology, medicine, and population biology. Biochemistry examines macromolecules - proteins, nucleic acids, carbohydrates, and lipids – and their building blocks, structures, functions, and interactions. Much of biochemistry is devoted to enzymes, proteins that catalyze chemical reactions, enzyme structures, mechanisms of action and their roles within cells. Biochemistry also studies small signaling molecules, coenzymes, inhibitors, vitamins, and hormones, which play roles in life processes. Biochemical experimentation, besides coopting classical chemistry methods, e.g., chromatography, adopted new techniques, e.g., X-ray diffraction, electron microscopy, NMR, radioisotopes, and developed sophisticated microbial genetic tools, e.g., auxotroph mutants and their revertants, fermentation, etc. More recently, biochemistry embraced the ‘big data’ omics systems. Initial biochemical studies have been exclusively analytic: dissecting, purifying, and examining individual components of a biological system; in the apt words of Efraim Racker (1913 –1991), “Don’t waste clean thinking on dirty enzymes.” Today, however, biochemistry is becoming more agglomerative and comprehensive, setting out to integrate and describe entirely particular biological systems. The ‘big data’ metabolomics can define the complement of small molecules, e.g., in a soil or biofilm sample; proteomics can distinguish all the comprising proteins, e.g., serum; metagenomics can identify all the genes in a complex environment, e.g., the bovine rumen. This Biochemistry Series will address the current research on biomolecules and the emerging trends with great promise.",coverUrl:"https://cdn.intechopen.com/series/covers/11.jpg",latestPublicationDate:"May 24th, 2022",hasOnlineFirst:!0,numberOfPublishedBooks:27,editor:{id:"31610",title:"Dr.",name:"Miroslav",middleName:null,surname:"Blumenberg",slug:"miroslav-blumenberg",fullName:"Miroslav Blumenberg",profilePictureURL:"https://mts.intechopen.com/storage/users/31610/images/system/31610.jpg",biography:"Miroslav Blumenberg, Ph.D., was born in Subotica and received his BSc in Belgrade, Yugoslavia. He completed his Ph.D. at MIT in Organic Chemistry; he followed up his Ph.D. with two postdoctoral study periods at Stanford University. Since 1983, he has been a faculty member of the RO Perelman Department of Dermatology, NYU School of Medicine, where he is codirector of a training grant in cutaneous biology. Dr. Blumenberg’s research is focused on the epidermis, expression of keratin genes, transcription profiling, keratinocyte differentiation, inflammatory diseases and cancers, and most recently the effects of the microbiome on the skin. He has published more than 100 peer-reviewed research articles and graduated numerous Ph.D. and postdoctoral students.",institutionString:null,institution:{name:"New York University Langone Medical Center",institutionURL:null,country:{name:"United States of America"}}},editorTwo:null,editorThree:null},subseries:{paginationCount:4,paginationItems:[{id:"14",title:"Cell and Molecular Biology",coverUrl:"https://cdn.intechopen.com/series_topics/covers/14.jpg",isOpenForSubmission:!0,editor:{id:"165627",title:"Dr.",name:"Rosa María",middleName:null,surname:"Martínez-Espinosa",slug:"rosa-maria-martinez-espinosa",fullName:"Rosa María Martínez-Espinosa",profilePictureURL:"https://mts.intechopen.com/storage/users/165627/images/system/165627.jpeg",biography:"Dr. Rosa María Martínez-Espinosa has been a Spanish Full Professor since 2020 (Biochemistry and Molecular Biology) and is currently Vice-President of International Relations and Cooperation development and leader of the research group 'Applied Biochemistry” (University of Alicante, Spain). Other positions she has held at the university include Vice-Dean of Master Programs, Vice-Dean of the Degree in Biology and Vice-Dean for Mobility and Enterprise and Engagement at the Faculty of Science (University of Alicante). She received her Bachelor in Biology in 1998 (University of Alicante) and her PhD in 2003 (Biochemistry, University of Alicante). She undertook post-doctoral research at the University of East Anglia (Norwich, U.K. 2004-2005; 2007-2008).\nHer multidisciplinary research focuses on investigating archaea and their potential applications in biotechnology. She has an H-index of 21. She has authored one patent and has published more than 70 indexed papers and around 60 book chapters.\nShe has contributed to more than 150 national and international meetings during the last 15 years. Her research interests include archaea metabolism, enzymes purification and characterization, gene regulation, carotenoids and bioplastics production, antioxidant\ncompounds, waste water treatments, and brines bioremediation.\nRosa María’s other roles include editorial board member for several journals related\nto biochemistry, reviewer for more than 60 journals (biochemistry, molecular biology, biotechnology, chemistry and microbiology) and president of several organizing committees in international meetings related to the N-cycle or respiratory processes.",institutionString:null,institution:{name:"University of Alicante",institutionURL:null,country:{name:"Spain"}}},editorTwo:null,editorThree:null},{id:"15",title:"Chemical Biology",coverUrl:"https://cdn.intechopen.com/series_topics/covers/15.jpg",isOpenForSubmission:!0,editor:{id:"441442",title:"Dr.",name:"Şükrü",middleName:null,surname:"Beydemir",slug:"sukru-beydemir",fullName:"Şükrü Beydemir",profilePictureURL:"https://s3.us-east-1.amazonaws.com/intech-files/0033Y00003GsUoIQAV/Profile_Picture_1634557147521",biography:"Dr. Şükrü Beydemir obtained a BSc in Chemistry in 1995 from Yüzüncü Yıl University, MSc in Biochemistry in 1998, and PhD in Biochemistry in 2002 from Atatürk University, Turkey. He performed post-doctoral studies at Max-Planck Institute, Germany, and University of Florence, Italy in addition to making several scientific visits abroad. He currently works as a Full Professor of Biochemistry in the Faculty of Pharmacy, Anadolu University, Turkey. Dr. Beydemir has published over a hundred scientific papers spanning protein biochemistry, enzymology and medicinal chemistry, reviews, book chapters and presented several conferences to scientists worldwide. He has received numerous publication awards from various international scientific councils. He serves in the Editorial Board of several international journals. Dr. Beydemir is also Rector of Bilecik Şeyh Edebali University, Turkey.",institutionString:null,institution:{name:"Anadolu University",institutionURL:null,country:{name:"Turkey"}}},editorTwo:{id:"13652",title:"Prof.",name:"Deniz",middleName:null,surname:"Ekinci",slug:"deniz-ekinci",fullName:"Deniz Ekinci",profilePictureURL:"https://s3.us-east-1.amazonaws.com/intech-files/0030O00002aYLT1QAO/Profile_Picture_1634557223079",biography:"Dr. Deniz Ekinci obtained a BSc in Chemistry in 2004, MSc in Biochemistry in 2006, and PhD in Biochemistry in 2009 from Atatürk University, Turkey. He studied at Stetson University, USA, in 2007-2008 and at the Max Planck Institute of Molecular Cell Biology and Genetics, Germany, in 2009-2010. Dr. Ekinci currently works as a Full Professor of Biochemistry in the Faculty of Agriculture and is the Head of the Enzyme and Microbial Biotechnology Division, Ondokuz Mayıs University, Turkey. He is a member of the Turkish Biochemical Society, American Chemical Society, and German Genetics society. Dr. Ekinci published around ninety scientific papers, reviews and book chapters, and presented several conferences to scientists. He has received numerous publication awards from several scientific councils. Dr. Ekinci serves as the Editor in Chief of four international books and is involved in the Editorial Board of several international journals.",institutionString:null,institution:{name:"Ondokuz Mayıs University",institutionURL:null,country:{name:"Turkey"}}},editorThree:null},{id:"17",title:"Metabolism",coverUrl:"https://cdn.intechopen.com/series_topics/covers/17.jpg",isOpenForSubmission:!0,editor:{id:"138626",title:"Dr.",name:"Yannis",middleName:null,surname:"Karamanos",slug:"yannis-karamanos",fullName:"Yannis Karamanos",profilePictureURL:"https://s3.us-east-1.amazonaws.com/intech-files/0030O00002g6Jv2QAE/Profile_Picture_1629356660984",biography:"Yannis Karamanos, born in Greece in 1953, completed his pre-graduate studies at the Université Pierre et Marie Curie, Paris, then his Masters and Doctoral degree at the Université de Lille (1983). He was associate professor at the University of Limoges (1987) before becoming full professor of biochemistry at the Université d’Artois (1996). He worked on the structure-function relationships of glycoconjugates and his main project was the investigations on the biological roles of the de-N-glycosylation enzymes (Endo-N-acetyl-β-D-glucosaminidase and peptide-N4-(N-acetyl-β-glucosaminyl) asparagine amidase). From 2002 he contributes to the understanding of the Blood-brain barrier functioning using proteomics approaches. He has published more than 70 papers. His teaching areas are energy metabolism and regulation, integration and organ specialization and metabolic adaptation.",institutionString:null,institution:{name:"Artois University",institutionURL:null,country:{name:"France"}}},editorTwo:null,editorThree:null},{id:"18",title:"Proteomics",coverUrl:"https://cdn.intechopen.com/series_topics/covers/18.jpg",isOpenForSubmission:!0,editor:{id:"200689",title:"Prof.",name:"Paolo",middleName:null,surname:"Iadarola",slug:"paolo-iadarola",fullName:"Paolo Iadarola",profilePictureURL:"https://s3.us-east-1.amazonaws.com/intech-files/0030O00002bSCl8QAG/Profile_Picture_1623568118342",biography:"Paolo Iadarola graduated with a degree in Chemistry from the University of Pavia (Italy) in July 1972. He then worked as an Assistant Professor at the Faculty of Science of the same University until 1984. In 1985, Prof. Iadarola became Associate Professor at the Department of Biology and Biotechnologies of the University of Pavia and retired in October 2017. Since then, he has been working as an Adjunct Professor in the same Department at the University of Pavia. His research activity during the first years was primarily focused on the purification and structural characterization of enzymes from animal and plant sources. During this period, Prof. Iadarola familiarized himself with the conventional techniques used in column chromatography, spectrophotometry, manual Edman degradation, and electrophoresis). Since 1995, he has been working on: i) the determination in biological fluids (serum, urine, bronchoalveolar lavage, sputum) of proteolytic activities involved in the degradation processes of connective tissue matrix, and ii) on the identification of biological markers of lung diseases. In this context, he has developed and validated new methodologies (e.g., Capillary Electrophoresis coupled to Laser-Induced Fluorescence, CE-LIF) whose application enabled him to determine both the amounts of biochemical markers (Desmosines) in urine/serum of patients affected by Chronic Obstructive Pulmonary Disease (COPD) and the activity of proteolytic enzymes (Human Neutrophil Elastase, Cathepsin G, Pseudomonas aeruginosa elastase) in sputa of these patients. More recently, Prof. Iadarola was involved in developing techniques such as two-dimensional electrophoresis coupled to liquid chromatography/mass spectrometry (2DE-LC/MS) for the proteomic analysis of biological fluids aimed at the identification of potential biomarkers of different lung diseases. He is the author of about 150 publications (According to Scopus: H-Index: 23; Total citations: 1568- According to WOS: H-Index: 20; Total Citations: 1296) of peer-reviewed international journals. He is a Consultant Reviewer for several journals, including the Journal of Chromatography A, Journal of Chromatography B, Plos ONE, Proteomes, International Journal of Molecular Science, Biotech, Electrophoresis, and others. He is also Associate Editor of Biotech.",institutionString:null,institution:{name:"University of Pavia",institutionURL:null,country:{name:"Italy"}}},editorTwo:{id:"201414",title:"Dr.",name:"Simona",middleName:null,surname:"Viglio",slug:"simona-viglio",fullName:"Simona Viglio",profilePictureURL:"https://s3.us-east-1.amazonaws.com/intech-files/0030O00002bRKDHQA4/Profile_Picture_1630402531487",biography:"Simona Viglio is an Associate Professor of Biochemistry at the Department of Molecular Medicine at the University of Pavia. She has been working since 1995 on the determination of proteolytic enzymes involved in the degradation process of connective tissue matrix and on the identification of biological markers of lung diseases. She gained considerable experience in developing and validating new methodologies whose applications allowed her to determine both the amount of biomarkers (Desmosine and Isodesmosine) in the urine of patients affected by COPD, and the activity of proteolytic enzymes (HNE, Cathepsin G, Pseudomonas aeruginosa elastase) in the sputa of these patients. Simona Viglio was also involved in research dealing with the supplementation of amino acids in patients with brain injury and chronic heart failure. She is presently engaged in the development of 2-DE and LC-MS techniques for the study of proteomics in biological fluids. The aim of this research is the identification of potential biomarkers of lung diseases. 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