HPV proteins and functions.
\r\n\t
",isbn:"978-1-80356-966-6",printIsbn:"978-1-80356-965-9",pdfIsbn:"978-1-80356-967-3",doi:null,price:0,priceEur:0,priceUsd:0,slug:null,numberOfPages:0,isOpenForSubmission:!0,isSalesforceBook:!1,isNomenclature:!1,hash:"f86a9f720cc3ac0f1c385d0367ea89b9",bookSignature:"Dr. Fiaz Ahmad and Prof. Muhammad Sultan",publishedDate:null,coverURL:"https://cdn.intechopen.com/books/images_new/11624.jpg",keywords:"Agricultural Waste, Reuse, Reduction, Soil Health, Recycling, Agriculture and Environment, Modelling and Simulation, Agro-Industrial Waste, Bioresource Processing, Processing and Management, Crop Residue, Forest Waste",numberOfDownloads:null,numberOfWosCitations:0,numberOfCrossrefCitations:null,numberOfDimensionsCitations:null,numberOfTotalCitations:null,isAvailableForWebshopOrdering:!0,dateEndFirstStepPublish:"April 8th 2022",dateEndSecondStepPublish:"June 16th 2022",dateEndThirdStepPublish:"August 15th 2022",dateEndFourthStepPublish:"November 3rd 2022",dateEndFifthStepPublish:"January 2nd 2023",dateConfirmationOfParticipation:null,remainingDaysToSecondStep:"20 days",secondStepPassed:!0,areRegistrationsClosed:!1,currentStepOfPublishingProcess:3,editedByType:null,kuFlag:!1,biosketch:"Dr. Fiaz Ahmad is a researcher in the field of Agricultural Engineering with fifteen years of field and academic experience, currently in charge of the Agricultural Machinery Design Laboratory at Bahauddin Zakariya University. He applied for two patents at the national level.",coeditorOneBiosketch:"A renowned researcher in the field of Agricultural Engineering with 14 years of academic experience at Bahauddin Zakariya University. Winner of various prestigious fellowships, awards, and research grants. Published 250+ articles along with several books and chapters. Guest editor of seven ISI-SCI journals for publishers like SAGE, MDPI, and Frontiers.",coeditorTwoBiosketch:null,coeditorThreeBiosketch:null,coeditorFourBiosketch:null,coeditorFiveBiosketch:null,editors:[{id:"338219",title:"Dr.",name:"Fiaz",middleName:null,surname:"Ahmad",slug:"fiaz-ahmad",fullName:"Fiaz Ahmad",profilePictureURL:"https://mts.intechopen.com/storage/users/338219/images/system/338219.png",biography:"Dr. Fiaz Ahmad is an assistant professor and lecturer at the Department of Agricultural Engineering, Bahauddin Zakariya University, Multan, Pakistan. He obtained his Ph.D. in Agricultural Bioenvironmental and Energy Engineering from Nanjing Agriculture University, China, in 2015, and completed his postdoctorate in Agricultural Engineering from Jiangsu University, Zhenjiang, China, in 2020. He was awarded a fellowship from the Higher Education Commission of Pakistan for Ph.D. studies and from the Chinese Government for post-doctoral studies. He earned a BSc and MSc (Hons) in Agricultural Engineering from the University of Agriculture, Faisalabad, Pakistan, in 2004 and 2007, respectively. He is the author of more than fifty journal and conference articles. He has supervised six master’s students to date, and is currently supervising six master and two doctoral students. Dr. Ahmad has completed three research projects with his research interest focusing on the design of agricultural machinery, agricultural waste management, artificial intelligence (AI), and agricultural bioenvironment.",institutionString:"Bahauddin Zakariya University",position:null,outsideEditionCount:0,totalCites:0,totalAuthoredChapters:"2",totalChapterViews:"0",totalEditedBooks:"1",institution:{name:"Bahauddin Zakariya University",institutionURL:null,country:{name:"Pakistan"}}}],coeditorOne:{id:"199381",title:"Prof.",name:"Muhammad",middleName:null,surname:"Sultan",slug:"muhammad-sultan",fullName:"Muhammad Sultan",profilePictureURL:"https://mts.intechopen.com/storage/users/199381/images/system/199381.png",biography:"Muhammad Sultan is an Assistant Professor at the Department of Agricultural\r\nEngineering, Bahauddin Zakariya University, Multan (Pakistan). He completed his Ph.D.\r\nand Postdoc from Kyushu University (Japan) in the field of Energy & Environmental\r\nEngineering. He was an awardee of MEXT and JASSO fellowships (from the Japanese\r\nGovernment) during Ph.D. and Postdoc studies, respectively. He also did a Postdoc as\r\na Canadian Queen Elizabeth Advance Scholar at Simon Fraser University (Canada) in\r\nthe field of Mechatronic Systems Engineering. He worked for Kyushu University\r\nInternational Institute for Carbon-Neutral Energy Research (WPI-I2CNER) for two years.\r\nCurrently, he is working on 4 research projects funded by the Higher Education\r\nCommission (HEC) of Pakistan. He has completed six projects in past in the field of\r\nagricultural engineering. He has supervised 10+ M.Eng. and Ph.D. thesis and 10+\r\nstudents are currently working under his supervision. He has published 120+ journal\r\narticles, 100+ conference articles, 13 book chapters, and 6 books. He is serving as guest\r\neditor for the journals like Sustainability (MDPI), Agriculture (MDPI), Energies (MDPI),\r\nAdvances in Mechanical Engineering (SAGE), Frontiers in Mechanical Engineering, and\r\nEvergreen Journal of Kyushu University. His research is focused on developing energy-\r\nefficient temperature and humidity control systems for agricultural storage, greenhouse,\r\nlivestock, and poultry applications. His research keywords include desiccant air-\r\nconditioning, evaporative cooling, adsorption heat pump, Maisotsenko cycle (M-cycle),\r\nenergy recovery ventilators; adsorption desalination; wastewater treatment.",institutionString:"Bahauddin Zakariya University",position:null,outsideEditionCount:0,totalCites:0,totalAuthoredChapters:"5",totalChapterViews:"0",totalEditedBooks:"0",institution:{name:"Bahauddin Zakariya University",institutionURL:null,country:{name:"Pakistan"}}},coeditorTwo:null,coeditorThree:null,coeditorFour:null,coeditorFive:null,topics:[{id:"5",title:"Agricultural and Biological Sciences",slug:"agricultural-and-biological-sciences"}],chapters:null,productType:{id:"1",title:"Edited Volume",chapterContentType:"chapter",authoredCaption:"Edited by"},personalPublishingAssistant:{id:"440212",firstName:"Elena",lastName:"Vracaric",middleName:null,title:"Ms.",imageUrl:"https://mts.intechopen.com/storage/users/440212/images/20007_n.jpg",email:"elena@intechopen.com",biography:"As an Author Service Manager, my responsibilities include monitoring and facilitating all publishing activities for authors and editors. From chapter submission and review to approval and revision, copyediting and design, until final publication, I work closely with authors and editors to ensure a simple and easy publishing process. I maintain constant and effective communication with authors, editors and reviewers, which allows for a level of personal support that enables contributors to fully commit and concentrate on the chapters they are writing, editing, or reviewing. I assist authors in the preparation of their full chapter submissions and track important deadlines and ensure they are met. I help to coordinate internal processes such as linguistic review, and monitor the technical aspects of the process. As an ASM I am also involved in the acquisition of editors. 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It was used to increase average and maximum lifespan in ancient times [2], however, in last 100 years CR effect on improvement of T2DM has been established by many researchers, because it can improve the metabolic parameters and pancreas islet function of type 2 diabetic patients [3]. The treatment efficacy and safety has been clear.
Nowadays, CR is only used in basic and clinical researches, and its form is disunity. The earliest form of this method used in the study is called fasting, which means apastia, and the participators should never eat anything except drink water. This method was eliminated because of its uncertain adverse reactions [4]. According to the different restricted objects of CR, it can be divided into low-calorie restriction diet, low-carbohydrate restriction diet, low-fat restriction diet and so on; according to the different frequency of CR, we can divide it into continuous CR, intermittent CR (followed CR for 2 days per week and normal diet at the other times) or every other day CR (followed CR one day and a normal diet the next day); and it can also been divided into short-term CR (≤9 days) and long-term CR (>9 days) according to the length of restriction duration. Moreover, low-calorie restriction could be divided into low-caloric diet (LCD) and very-low-caloric diet (VLCD). All of them may improve the state of T2DM, control the blood glucose stably and reduce its morbidity, but the differences of the treatment efficacy among them are not clear until now.
As a lifestyle intervention method, it is very important to make sure whether this therapy can prevent T2DM from occurrence in the high risk persons. Tuomilehto et al. [5] had assigned 552 middle-aged, overweight subjects with impaired glucose tolerance to either the intervention group or the control group. Each subject in the intervention group received individualized counseling aimed at reducing weight, total intake of fat, and intake of saturated fat and increasing intake of fiber and physical activity. After 3.2 years follow-up, they found that the cumulative incidence of diabetes was 11 percent (95% confidence interval, 6% to 15%) in the intervention group and 23% (95% confidence interval, 17% to 29%) in the control group, moreover, during the trial, the risk of diabetes was reduced by 58% (P<0.001) in the intervention group. The next year, another larger sample follow-up study focused on the lifestyle intervention on diabetes prevention, including CR, exercise, et al. Three years follow-up later, CR reduced the incidence by 58% (95% confidence interval, 48% to 66%), as compared with placebo [6]. These studies provided satisfactory evidences on the preventive effect of CR on T2DM.
CR has shown to be helpful for the blood glucose control and the improvement of pancreatic islet function. It produces multiple beneficial effects on metabolic parameters in type 2 diabetic patients by virtue of both calorie restriction and weight loss. Animal experiments confirmed that CR regulates the process of glucose metabolism in a variety of tissues (adipose tissue, liver, pancreas, skeletal muscle, et al) [7]. In clinical trials, the blood glucose of the participators decreased to normal range within a few days, and to the lowest point after 1-2 weeks [8]. In another short-term study of 14 obese patients with T2DM using VLCDs, marked improvement was seen in glycosylated HbA1c [9]. It fell from 7.4±0.3% to 6.0±0.2% after 8 weeks VLCD [10]. As a consequence, CR was thought to improve glucose metabolism in type 2 diabetics. Besides, the fasting plasma insulin/C-peptide levels of patients with T2DM fell after CR, and thus improved the insulin sensibility [11]. Generally, Blood pressure, triglycerides, total cholesterol and LDL-C were reduced, while only HDL-C varied [12, 13].
Whether CR improves the state of T2DM for a long time has been the major concern for many researchers. Unick et al. [14] chose 5145 type 2 diabetic patients randomized to an intensive lifestyle intervention and diabetes support and education. The lifestyle intervention group received a behavioral weight loss program that included group and individual meetings, a ≥10% weight loss goal, calorie restriction, and increased physical activity. Diabetes support and education received a less intense educational intervention.After four years follow-up, body weight, blood glucose and lipid profile improved significantly in the intervention group, suggesting that CR may obtain an optimal long-term metabolic control in T2DM patients.
Because of the poor compliance of patients with long-term CR, there are few researches in this area, and more researchers begin to concentrate on the long-term effect of short-term CR on T2DM patients. In a clinical study, 40 obese patients with T2DM and symptomatic hyperglycaemia were selected despite combination oral anti-diabetic therapy+/-insulin, and given 8 weeks of VLCD therapy (750kcal/d), followed by standard diet and exercise advice at 2-3 month intervals up to 1 year [15]. After 8 weeks of VLCD, body weight and body mass index (BMI) fell significantly, with favourable reductions in blood pressure, fructosamine and HbA1c. Sustained improvements were evident after 1 year, with minimal weight regain. Unexpectedly, glycemic control tended to deteriorate. In another study, 18 insulin-treated T2DM patients were treated with 30 days VLCD (450kCal/day) with the cessation of all glucose-lowering medication, and then followed for 18 months [16]. Caloric intake was slowly increased to eucaloric and glucose-lowering medication can be restarted if necessary. After 18 months follow-up, the use of insulin was significantly reduced: 18 out of 18 patients on day 0, 5 out of 18 patients at 18 months. Moreover, although patients using insulin at 18 months had regained weight a little, but still had a better cardiovascular risk profile compared with this parameter before CR (Table 1). In spite of favourable outcomes, these shorter term CR studies still require more data to clarify the long-term therapeutical effect of CR on metabolic disorders.
Metabolic disorders including obesity and diabetes are more prevalent in children and adolescents. However, most of them cannot obtain a satisfactory blood glucose control since pharmacologic agents currently approved for use in children and adolescents with T2DM (metformin and insulin) are less optimal. Therefore, in hope of a better glucose control in children, lifestyle intervention attracted many interests. A chart review of 20 children (mean age 14.5±0.4 years) who consumed a ketogenic VLCD in the treatment of T2DM was conducted [17]. Eventually, VLCD allowed insulin and oral agents to be discontinued in all but one subject who was not compliant, and no other subjects required resumption of medications during the course of the diet on the condition that the metabolic parameters such as blood glucose and blood pressure were well controlled. More importantly, this study monitored the metabolic profiles to ensure that the patients were not at risk for developing electrolyte disturbances or ketoacidosis. Fortunately, none experienced nausea, vomiting, dehydration, or other side effects, such as orthostatic dizziness, muscle cramps, fatigue or halitosis previously reported in pediatric studies.
The efficacy and safety of CR in the elderly were also investigated. Recently, a total of 5145 individuals with T2DM (1053 aged 65 to 76 and 4092 aged 45 to 64) were chosen to compare the effects of 4 years of intensive lifestyle intervention in older and younger individuals [18]. Both groups were respectively divided into two subgroups and given either lifestyle intervention (include CR and exercise) or health education. After 4 years follow-up, lifestyle intervention was favourable to a better control of blood glucose, blood pressure. Surprisingly, the elderly group gained more benefits than the younger group. Therefore, CR may be considered to be a treatment to metabolic disorders.
In recent years, a number of studies have expounded the possible mechanisms from different sides of the CR studies.
It was thought that the effect of CR on blood glucose was similar to bariatric surgery, because both of them base on weight loss. Insulin sensitivity and blood glucose are improved after weight loss. However, it is still uncertain. An important issue is that blood glucose of patients fell before weight loss during 40 days VLCD [19]. Studies haven’t been consistent with the effect of CR on obese patients with type 2 diabetes either. Bergman et al. [20] had compared the effect of CR on patients with normal BMI (22.8±0.42kg/m2) and obesity (36.1±1.548kg/m2), and found that both groups had a drop of hepatic glucose production volume after 12-48 hours CR, with a better improvement of the insulin sensitivity in normal BMI group. Recently, Unick et al. [14] divided the participators into overweight group, mildly obese group, moderately obese group and severely obese group according to their body weight, then they were treated with CR. The result showed that the overweight group lose less weight than other groups, but the change of other metabolic indicators was similar. This may show the change of body weight and metabolic indicators is not always parallel. So whether the effect of CR on the control of blood glucose was dependent on the weight loss is unclear now.
Firstly, CR inhibits gluconeogenesis, leading to the decrease of hepatic glucose output, thus reducing the glucose source; it increased fatty acid oxidation in the liver, and then produces ketones, which can improve the tolerance of hungry by inhibiting the appetite impulsion from hypothalamus; glucose metabolism and consumption in liver and muscles also increase after CR [21]. Secondly, CR increases the insulin sensitivity and reduces insulin resistance. When patients were recruited to evaluate the effect of VCLD, insulin resistance index significantly decreased eventually [22, 23]. However, it is still controversial. No contribution of CR on insulin sensitivity was found after 14 severely obese patients with T2DM were treated with VLCD for 7 days [10]. The short duration of VLCD and special population chosen may be responsible for this unsatisfactory result. Finally, CR improves pancreas islet function. The insulin secretion and the area under the insulin curve of OGTT increased after CR [24]. The first phase insulin secretion, which represents acute insulin response, increased after CR as well. Therefore, CR was thought to improve pancreas islet function.
Figure 1 shows the effects of CR on glycometabolism. CR leads to glycogen depletion in muscle and liver, and restriction of carbohydrate leads to lipolysis and the formation of ketone bodies by the liver. Together, hepatic glucose output is reduced via inhibition of gluconeogenesis and glycogenolysis. Meanwhile, high protein stimulates insulin secretion and increases satiety. Circulating ketone bodies probably contribute to tolerability of the diet by suppressing appetite in the hypothalamus. Weight loss and diminution of fat depots in the liver, muscle and peri-visceral space lead to reductions in insulin resistance. Improved insulin sensitivity, dynamic insulin secretion and reduced hepatic glucose output lead to reductions in blood glucose levels.
The effects of calorie restriction on glycometabolism. VLCD, very low calorie diet; CHO, carbohydrate.
CR is “a new environment” to the human body. It causes lower blood glucose, insulin level, fat content and body weight. This helps human more tolerant to stress, thus some chronic diseases (T2DM, et al) could be prevented or treated [25]. Figure 2 has shown the effects of CR on oxidative stress. CR results in an increase in the level and activation of _adenine nucleotide translocase (ANT) and uncoupling protein (UCPs) to reduce the mitochondrial membrane potential, which induces a decrease in superoxide radical production at complex 1 of the electron transport chain. Less damage to the lipids in the mitochondrial membrane is further reduced by increases in the membrane lipid saturation. Increases in superoxide dismutase convert superoxide into hydrogen peroxide and increased levels of glutathione peroxidase (GPX) and catalase convert this to water reducing the product of the toxic hydroxyl radical (OH-) [26]. Lower levels of OH reduce the oxidative damage to proteins and DNA, which is further ameliorated by enhanced levels of degradation and base excision repair respectively. Animal experiments also confirmed that the oxygen free radicals in mice reduced and the β-hydroxybutyrate, which could act as an antioxidant, was increased after CR. In some clinical studies, some inflammatory factors (such as tumor necrosis factor-α, interleukin-6, interleukin-8) decreased significantly after CR.
The effects of calorie restriction on oxidative stress.
In 2011, Qiao et al. [27] found adiponectin gene expression increased in CR mice. Adiponectin in circulation could regulate various metabolic processes, including anti-inflammatory, insulin sensitivity and resistance, et al. It becomes another possible mechanism.
Nowadays, the regime of CR in various studies is still not uniform. This causes imparity of CR effect. A systematic review published in 2004 showed that a very low calorie diet was associated with the most weight loss after 12 months in one small study with beneficial effects on asthma. There was no evidence that low carbohydrate diets were associated with greater long-term weight loss than low calorie diets. Nevertheless, they were associated with greater lowering of fasting plasma glucose and HbA1c than low calorie diets, with more adverse events, such as increasing risk of arhythmia, osteoporosis or kidney stones [28]. Until now, there are few evidences from large-scale follow-up studies to clarify the differences among various CR forms.
Strict caloric restriction may increase risk of hypoglycemia. There are not enough evidences that CR causes arrhythmia or electrolyte disorders in the studies reported until now [29]. The risk of gallstones may be higher in the first few days because of inadequate intake of fat. Bone density decreases during CR without any data showing it increases fracture risk. The most remarkable adverse reaction is increase of uric acid during CR, but only few study found it induced gout. CR may induce the onset of ketosis, which may depend on the total intake of carbohydrate rather than calorie [30]. However, the level of ketone bodies in serum during CR is generally 0.33-0.71mmol/l, which is far below the level during ketoacidosis (>25mmol/l), even though it is abnormal.
Other possible adverse effects include mild dizziness, headache, fatigue, cold, dry skin, transient rash, changes of defecate habits, hair loss, cramps, menstrual disorders and short-term elevated transaminases [31]. Yet for all that, these adverse effects are all slight, and can be treated easily. Generally, CR is relatively safe in patients with type 2 diabetes, but more long-term adverse effects needed to be observed.
As a type of lifestyle interventions, CR may play a pivotal role in the therapeutic strategy to maintain optimal glycemic control and prevent complications in the patients with type 2 diabetes. In the light of the unreasonable lifestyle nowadays, CR should be paid enough attention to because it provides more choices for the prevention and treatment of T2DM. Existing studies cannot ensure uniform regime of CR for different state of T2DM. Large-scale and forceful researches are required to clarify the differences among all the forms of CR and the long-term adverse effects.
Head and Neck Squamous Cell Carcinoma (HNSCC) contribute to substantial morbidity and mortality worldwide, with an estimated 526,481 incident cases annually [1]. HNSCC arise from the mucosal epithelium of oral cavity, pharynx and larynx. . Apart from the prime etiologic factors like environmental carcinogens and carcinogenic viruses, genetic predisposition plays a risk-modulating role [2] in which the large burden of mutations lead to the heterogeneity of the tumour. Human Papilloma Virus (HPV) is a well-known risk factor for malignant transformation and is increasingly associated with the majority (60–70%) of the recently diagnosed oropharyngeal cancer incidences. Majority of the HPV-induced Oropharyngeal cancers harbour high risk HPV16 primarily and to a lesser extent HPV18 and other strains of HPV [3]. In Human papilloma virus induced tumourigenesis, HPV derived oncoproteins E6 and E7 inactivate the tumour suppressor genes p53 and pRb (retinoblastoma), resulting in the onset and eventual progression to malignancy [4]. HPV-associated HNSCC cells are poorly differentiated, non-keratinizing, and have a distinct ‘basaloid’ appearance in contrast to the non-HPV associated HNSCC which are usually moderately differentiated and keratinizing [5]. As the HPV DNA integrates into the host cell genome in a large proportion of HPV associated HNSCC, the tumours of HPV positive HNSCC differ at their genetic level [6]. Compared to the HPV negative HNSCC, HPV- associated HNSCCs manifest lower levels of chromosomal mutations [7]. Southern blotting, Polymerase Chain Reaction (PCR) and its variations like Reverse transcriptase and Real Time PCR, in situ hybridization, immunohistochemical staining for p16, immunostaining with anti E6, E7 antibosies, PCR in situ hybridization (PISH) are some of the techniques used for the detection of HPV in the Head and Neck cancers [8]. HPV positive HNSCC patients with lymph node metastases exhibit improved loco-regional control showing regression more quickly. They are more likely to resolve better after treatment when compared to the lymph node metastases of HPV negative HNSCC patients. Patients with HPV associated HNSCC have a better survival rate over HPV negative HNSCC patients with a 58% reduction in mortality risk [9].
The Head and Neck cancers arise from the tumours of mucosal epithelium in the oral cavity (lips, hard palate, buccal mucosa, floor of mouth, anterior tongue, and retromolar trigone), nasopharynx, oropharynx (palatine tonsils, lingual tonsils, soft palate, base of tongue, uvula and posterior pharyngeal wall), hypopharynx and larynx. Tumour growth in the oral cavity, hypopharynx and larynx is due to tobacco consumption and continuous alcohol abuse whereas, cancers in the pharynx (from the palatine and lingual tonsils of the oropharynx) are increasingly attributed to infection with Human Papillomavirus (HPV), primarily HPV-16, 18 and also other HPV strains. Therefore, the Head and Neck Squamous Cell Carcinoma (HNSCC) can be grouped into HPV-negative and HPV-positive [10]. The primary site of HPV-positive groups is the oropharynx (51%) and various other sites like larynx (11%), oral cavity (9%), nasopharynx (9%), and pharynx (5%) also encompass HPV positive tumours [11]. HPV is an epithelium-specific infection that does not spread though the bloodstream. Consequently, a limitation of HPV serology is that it does not specify the anatomic site of HPV infection. Hence, the elevated odds of oral cancer observed in association with oral HPV infection are considered more strong evidence for a direct relationship between HPV infection and oral cancer. The data obtained from risk factors associated with sexual behaviour, HPV exposure and oral HPV detection indicate that sexually acquired oral HPV infection is the principal risk factor for many cancers arising from the oral cavity. Based on the research findings, there is apparent evidence on the HPV transformation within the oral cavity, the tonsillar crypt epithelium, ectopic tonsillar tissue in the lateral posterior tongue or floor of mouth. This is approximated to occur in 0.4 per 100,000 individuals. These findings prove that the oral cavity is an intended site for HPV positive tumours [12, 13]. An international case-control study has estimated that HPV plays a part in approximately 3% of oral cavity cancers [14].
The HPV positive HNSCC is made up of highly malignant cells that have a high nuclear to cytoplasmic ratio and exhibit little or no keratinization. These cells differ from the non-neoplastic squamous epithelium that lines the oral cavity. The HPV related cancers mostly arise in the reticulated epithelium-the specialized epithelium lining the tonsillar crypts. So, the HPV-related oropharyngeal cancers remain highly differentiated. The HPV negative HNSCC are of a heterogeneous group of benign and malignant lesions characterized by small tumour cells with round or ovoid nuclei surrounded by a thin rim of cytoplasm. On the other hand, HPV-related HNSCC encompasses basaloid cells. These cells exhibit lobular growth with dense hyperchromatic nuclei and a high nuclear to cytoplasmic ratio [15]. A recent study has shown that the “basaloid” subtype is, in fact, composed of a mixed group of HPV-positive and HPV-negative cancers that widely differ with respect to clinical behaviour [16].
Various epidemiological studies have revealed a diverse range of HNSCC associated risk factors. These risk factors include tobacco consumption, alcohol abuse, exposure to environmental pollutants and infection with viral agents namely, Human Papilloma Virus and Epstein Barr Virus (EBV). Certain risk factors show geographical, cultural and habitual prevalence [10]. Among the Asian population, oral cavity cancer is attributed to chewing of areca nut products including ‘betel quid’-variety of customized mixtures comprising areca nut (Areca catechu, the carcinogen source), betel leaf (the leaf of Piper betel), slaked lime and/or tobacco, as well as spices according to local custom [17]. In common, the high male to female ratios for HPV-negative HNSCC incidence reflects the sex-specific patterns of variable risk behaviours, including the use of the aforesaid tobacco, smokeless tobacco, areca nut, betel quid and alcohol [17]. The additional risk factors that contribute to HNSCC include ageing, poor oral hygiene and diets lacking in vegetables [18]. In terms of the infectious agents that causes HNSCC, continuous infection with HPV and EBV can cause a rise in the cancers of Oropharynx and Nasopharynx [10]. The HPV infection that leads to HNSCC is mainly transmitted by oral sex and the occurrence of HPV-positive HNSCC continues to increase, especially in populations that are not vaccinated against HPV prior to HPV exposure [19]. Certain genetic factors have also been reviewed to contribute to HNSCC risk. Individuals with Fanconi anaemia, a rare, inherited genetic disease characterized by impaired DNA repair, have a 500- to 700-fold increased risk of developing HNSCC, primarily in the oral cavity [10].
Frequent loss of chromosome arms 3p, 9p and amplification of 11q13 chromosomal region are observed in HNSCC. The key genes which are reported to be mutated by comprehensive genomic sequencing studies for Head and Neck squamous cell carcinoma are
The protein expression alterations in HPV- positive and HPV-negative groups showed a low expression of biomarker proteins such as MGMT, EGFR, and PD1-positive TILs in HPV positive and negative patients. Overexpression of EGFR protein is reported in HNSCC resulting in treatment resistance, aggressive clinical behaviour, and poor prognosis. The immunomodulatory protein PD-1 positivity occurs with highest frequency in pharyngeal cancers and PDL1 levels are detected in higher levels in nasopharyngeal cancers [11]. Patients with HPV positive tumours ensues abrogation of p53 and retinoblastoma (Rb) genes. The downregulation of the Rb gene results in the upregulation of p16 oncoprotein. The p16 oncoprotein is considered a biomarker for HPV-related HNSCC, where it is overexpressed. The minichromosomal maintenance protein 7 (MCM7) is expressed in high levels in HPV-positive head and neck cancer [19]. The p21 protein expression is identified in the HPV related tonsillar cancer. Reduced expression of p21 results in E6-mediated p53 inactivation. Outcomes from other studies indicate that E7 bypasses the inhibitory effect of p21 on cell cycle progression [20, 21]. Survivin (Baculoviral IAP repeat-containing protein 5) is negatively regulated by p53. This protein represses apoptosis and plays a role in cell division. Nuclear survivin expression is associated with a poor disease-free survival rate and negative HPV status in OPSCC [22]. Thioredoxin (TRX) (redox mediator promoting cell survival) and epidermal fatty acid binding protein (E-FABP) involved in keratinocyte differentiation and other cellular signaling processes were perceived to be upregulated in HPV-related tumours and their role in HPV-related OSCC. Several cell surface glycoprotein molecular biomarkers such as CD44, CD133, ALDH1 occurs in elevated level in HNSCC. The HNSCC cells with high levels of CD44 glycoproteins are capable of self-renewal. CD44 levels in HNSCC tumours are associated with metastasis and a poor prognosis [23, 24]. CD133 glycoproteins results in increased invasiveness and metastasis in HNSCC. The increased levels of ALDH1 causes self-renewal, invasiveness and metastasis in HNSCC (Figures 1–3 and Table 1) [25].
The Genomic Map of HPV 16.
Molecular events in HPV carcinogenesis.
HPV transformation via Tonsillar crypt.
HPV proteins | Functions |
---|---|
Early proteins | |
E1 | Initiation of viral genome replication. |
E2 | Viral DNA replication and transcription. Segregation of viral genomes. |
E4 | Viral genome packing. Maturation of viral particles. |
E5 | Oncoprotein. Participates in host cell transformation and blocks apoptosis in late events of HPV carcinogenesis. |
E6 | Major oncoprotein. Inactivates p53 protein. Block apoptosis. Interacts with many host proteins with PDZ domains. |
E7 | Major oncoprotein. Inactivates pRb protein. Promotes host DNA synthesis and proliferation. Interacts with many host proteins |
Late proteins | |
L1 | Major capsid protein, Viral replicating proteins |
L2 | Minor capsid protein. Viral replicating proteins |
HPV proteins and functions.
The common cytogenetic changes observed in head and neck cancers are losses of segments of 3p, 5q, 8p, 9p, 10p, and 18q and gains of segments within 3q, 5p, 7p, 8q, distal 1q, and 11q13–23 regions.
Amplifications of 11q13 and 7p11 regions encoding
The microRNA let-7c, a cell cycle regulator, is frequently inactivated in both HPV negative and HPV positive HNSCC. Decreased expression of let7-c is linked with increased expression of CDK4, CDK6, E2F1 and PLK1 kinases and translational regulators important for advancement through the cell cycle [29].
Molecular heterogeneity has been found to exist within HPV (+) tumours themselves. High rate of proliferation and increase in genomic instability is associated with HPV integration [30]. Human papilloma virus induced tumourigenesis occurs predominantly in the oropharynx region (tonsil or base of tongue), where HPV acquired oncoproteins E6 and E7 inactivate the tumour suppressor genes
HPV positive HNSCC are characterized by wild-type TP53. High-risk types HPV encode two viral oncoproteins namely E6 and E7 that aid tumour progression by inactivating the two well-characterized tumour suppressor proteins TP53 and RB1, respectively. Un-phosphorylated RB1 plays a crucial role in the negative regulation of cell proliferation, generating cell cycle arrest in mid to late G1. Wild-type TP53 behaves as a cell cycle checkpoint after DNA damage and induces G1 arrest or apoptosis, essential to conserve the genomic stability [32]. However, HPV-associated cancers normally do not manifest
Meagre or no
Truncating mutations are observed in TNF receptor-associated factor 3 (
Amplification of E2F1 region which is necessary for cell cycle initiation and proliferation and an intact 9p21.3 region containing the CDKN2A gene are observed in the HPV positive HNSCC [38].
TpC mutations were observed predominantly in HPV associated HNSCC patients during the whole exome sequence analysis. These TpC mutations lead to APOBEC mutational signature in HPV positive HNSCC [38]. Overexpression of APOBEC enzymes in HPV-associated tumours may be linked to increased cytosine deaminase mutation [39]. Genes encoding HLA I components are frequently mutated in HPV positive Oropharyngeal Squamous Cell Carcinoma (OPSCC) [39]. Sewell et al. [40] in 2014 screened eleven DNA repair proteins which included
Segregation of four genes are observed as inactivating mutations in HPV positive tumours of which two genes
HPV negative HNSCC tumours features novel co-amplifications of 11q13 (
Cyclin-dependent kinase inhibitor 2A (also known as p16 INK4A) that is encoded by
The transmembrane receptor protein
The region of epidermal growth factor receptor (
Mutations in genes
TCGA [38] | Seiwert et al. [46] | Stransky et al. [47] | Agrawal et al. [43] | |||
---|---|---|---|---|---|---|
HPV (+ve) | HPV (−ve) | HPV (+ve) | HPV (−ve) | HPV (+ve) | HPV (−ve) | HPV (+ve) |
E6/E7 (100%) | TP53 (84%, M) | E6/E7 (100%) | TP53 (81%, M) | E6/E7 (100%) | TP53 (73%, M) | E6/E7 (100%) |
PIK3CA (56%, M/A) | CDKN2A (57%, M/D) | PIK3CA (22%, M) | CDKN2A (33%, M/D) | PIK3CA (27%, M) | CDKN2A (25%, M/D) | EPHB3 (25%, M) |
TP63 (28%, A) | let-7c (40%, miRNA) | TP63 (16%, M/A) | MDM2 (16%, A) | RUFY1 (18%, M) | SYNE1 (22%, M) | UNC5D (25%, M) |
TRAF3 (22%, M/D) | PIK3CA (34%, M/A) | PIK3CB (13%, M/A) | MLL2 (16%, M) | EZH2 (18%, M) | CCND1 (22%, A) | NLRP12 (25%, M) |
E2F1 (19%, A) | FADD (32%, A) | FGFR3 (14%, M) | NOTCH 1 (16%, M) | CDH10 (18%, M) | MUC16 (19%, M) | PIK3CA (25%, M) |
let-7c (17%, miRNA) | FAT1 (32%, M/D) | NF1/2 (12%, M) | CCND1 (13%, A) | THSD7A (18%, M) | USH2A (18%, M) | TM7SF3 (25%, M) |
NOTCH1/3 (17%, M) | CCND1 (31%, A) | SOX2 (12%, A) | PIK3CA (13%, M) | FAT4 (18%, M) | FAT1 (14%, M) | ENPP1 (25%, M) |
FGFR3 (11%, F/M) | NOTCH1/2/3 (29%, M/D) | ATM (10%, D) | PIK3CB (13%, M/A) | KMT2D (18%, M) | LRP1B (14%, M) | NRXN3 (25%, M) |
HLA-A/B (11%, M/D) | TP63 (19%, A) | FLG (12%, M) | UBR5 (13%, M/D) | ZNF676 (18%, M) | ZFHX4 (14%, M) | MICAL2 (25%, M) |
EGFR (6%, M) | EGFR (15%, M/A) | MLL3 (10%, M) | EGFR (12%, A) | MUC16 (18%, M) | NOTCH1 (13%, M) | — |
Genes altered in HPV-positive and HPV-negative HNSCC.
M, mutation; A, amplification; D, deletion; F, fusion.
Lin et al. [48] | Pickering et al. [49] | Pickering et al. [50] | |
---|---|---|---|
CDKN2A/B (13%, M/D) | TP53 (94%, M) | TP53 (57%, M) | CDKN2A (74%, D) |
ARID1A (11%, M/D) | CSMD1 (25%,D) | CSMD1 (75%,D | TP53 (66%, M) |
SYNE1 (8%, M) | PIK3CA (0%, M); (30%A) | PIK3CA (11%, M); (70%, A) | FAT1 (46%, M/D) |
ATG13 (6%, M/D) | CDKN2A (6%, M); (55%, D) | CDKN2A (4%, M); (65%, D) | TP63 (26%, A) |
MLL2 (6%, M) | FADD/CCND1 (40%, A) | FADD/CCND1 (65%, A) | CCND1 (23%, A) |
PIK3CA (6%, M/A) | FAT1 (6%, M); (50%, D) | FAT1 (25%, M); (35%, D) | MAML1 (23%, D) |
CCND1 (4%, A) | EGFR (20%, A) | EGFR (50%, A) | EGFR (17%, A) |
NOTCH3 (4%, M) | NOTCH1 (25%, M) | NOTCH1 (18%, M) | TNK2 (17%, A) |
FGFR2 (4%, M) | HLA-A (0%, M) | HLA-A (14%, M) | AKT1 (14%, A) |
TP53 (17%, M/D) | CASP8 (6%, M) | CASP8 (11%, M) | SRC (14%, A) |
Altered genes in different anatomic sites of HNSCC irrespective of HPV infection.
M, mutation; A, amplification; D, deletion; F, fusion.
Epigenetic events of HNSCC include DNA methylation, chromatin remodelling, histone posttranslational covalent modifications and effects of non-coding RNA. Epigenetics sway silencing of tumour suppressor genes by promoter hypermethylation, regulate transcription by microRNAs and changes in chromatin structure, or induce genome instability through hypomethylation. Most of the HNSCC are caused by hypomethylation of the promoter genes or retrotransposons. Lower methylation of retrotransposons elements such as LINE (long interspersed elements) and SINE (short interspersed elements) causes the initiation of tumour in HNSCC. It is also reported that hypomethylation is concerned with tongue squamous cell carcinoma (TSCC) among the female gender [51]. The hypomethylation of Alu, one of the SINEs, is reported in the oral cancer patients of Asian population in the advanced stages of cancer [52]. Further, patients with severe malignant oral carcinogenesis are associated with hypomethylation of LINE sequences [53]. The hypermethylation in HNSCC implicate a high level of methylation in promoters of genes, which is a characteristic feature for epigenomes of cancer cells. Hypermethylation of certain genes such as
Mirghani et al. [60] | Hui et al. [61] | Gao et al. [62] | Lajer et al. [63] | Gao et al. [64] |
---|---|---|---|---|
miR-324-5p | miR-324-5p | miR-324-5p | ||
miR-155 | miR-155 | miR-155 | ||
miR-107 | miR-107 | |||
miR-9 | miR-9 | |||
miR-145 | miR-145 | |||
miR-99b-3p | miR-99b-3p | |||
miR-18a-5p | miR-18a-5p | |||
miR-26b | miR-26b | |||
miR-363 | miR-363 | |||
miR-381 | miR-381 | |||
miR-101 | miR-101 |
Deregulated miRNAs in HNSCC irrespective of HPV infection.
In HNSCC, activation of EGFR is executed by binding of ligands such as EGF, amphiregulin, and transforming growth factor alpha-TGFα. Ligand binding provokes receptor dimerization (homo or hetero dimerization with other EGFR members), leading to phosphorylation of tyrosine residues. This leads to sequential activation of various signalling cascades like Ras/Raf/mitogen-activated protein kinase (MAPK), phosphoinositide 3-kinase (PI3K)-Akt, signal transducer and activator of transcription pathways. Phosphorylated MAPK translocates into the nucleus, phosphorylating various transcription factors that trigger the expression of distinct target genes, which advocates proliferation, differentiation, migration, invasion, angiogenesis and metastasis in HNSCC cells. Aberration of EGFR signal activation can bring about disruption of cancer cell homeostasis [57, 58, 59].
Activated by the receptor-associated tyrosine kinases (RTKs) such as EGFR, the catalytic subunit phosphorylates phosphatidylinositol 1, 4-bisphosphate (PIP2) to phosphatidylinositol 1, 4, 5-triphosphate (PIP3). PIP3 recruits proteins like phosphoinositide-dependent protein kinase 1 (PDK1) and AKT to the plasma membrane, resulting in the phosphorylation of AKT by PDK1 and mammalian target of rapamycin complex 2 (mTORC2). Activated AKT and mTORC1 in turn activates the eukaryotic translation inhibition factor 4E-binding protein 1 (4E-BP1), resulting in cell growth, protein synthesis, and proliferation of HNSCC. The tumour suppressor phosphatase and tensin homology (PTEN) negatively regulates the cellular level of PIP3 by converting it to PIP2 through its lipid phosphatase activity thereby negating the activation of AKT and its downstream pathways. More than 80% of mutations occur in exon 9 (Helical domain) and exon 20 (Kinase domain) through gene amplification mechanism and increase in low-level copy number. More invasive forms of HNSCC have been proclaimed to harbour copy number increase in 3q26 region and engage in vascular invasion and lymph node metastasis. Oncogenic PIK3CA mutations are common particularly in HPV-positive head and neck cancers. PIK3CA mutations may combine with E6 and E7 proteins of HPV in the evolution of invasive OPSCC [57, 58, 59].
In HNSCC, TP53 has been linked with the risk of progression from mild dysplasia to invasive carcinoma. P53 level is determined by MDM2, which by ubiquitination degrades p53. Contrarily, p14 and p16 encoded by CDKN2A inhibits MDM2 and shields p53 from degradation. RB inhibits E2F transcription factor from progressing into the cell cycle. Cyclin and cyclin-dependent kinases (CDK) like D1/CDK4/CDK6 are activated by mitotic signals which leads to the inactivation of RB via phosphorylation. p21 (CDKN1) and p16 (INK4A/MTS1/CDKN2) encoded by CDKN2A inhibits Cyclin D1-CDK4/6 complex. Phosphorylation of RB results in release of E2F and cell cycle progresses to S, G2 and M phases. Inactivation of p53, RB, p16 and p14 through mutation, deletion or epigenetic silencing and overexpression of cyclin D1 (CCND1 gene), MDM2 and CDK4 have been associated with tumorigenesis and reduced survival in HNSCC. HPV infection can inhibit the activation of p53 and RB in HNSCC. Seven early proteins (E1–E7) and two late capsid proteins (L1 and L2) are encoded by HPV genome.
HPV E6 combines with E6-associated protein (E6-AP) and endorses p53 ubiquitin proteasome degradation. For binding to RB, HPV E7 protein encounters with E2F. As RB acts as a negative regulator for the cyclin-dependent kinase inhibitor p16, overexpression of p16 has been established to be of great clinical value in determining the HPV-positive status of the tumours using immunohistochemistry (IHC) (Figure 4) [57, 58, 59].
EGFR, PI3K-AKT- mTOR, p53/Rb/CDKN2A/CCND1 pathways.
The NOTCH family consists of four receptors (NOTCH1-4) adhered to the cell membrane. They are activated by two families of ligands, namely, Delta-like (Dll1, DllL3, Dll4) and Jagged (Jag1 and Jag2). Binding of ligands to NOTCH receptors persuade NOTCH cleavage by TNFα-converting enzyme (TACE) (ADAM metalloprotease) and γ-secretase, which results in the release of NOTCH intracellular domain (NICD). NICD associates with CSL/MAM complex, binds to DNA and promotes transcription. NOTCH pathway is a conserved signal transduction cascade which alters cell function such as cell differentiation, survival and self-renewal capacity. Notch activity has been associated with the suppression of HPV E6 and E7 protein expression, leading to for loss of Notch in HPV+ HNSCC. NOTCH1 signalling stimulates terminal differentiation of keratinocytes and it is negatively regulated by EGFR pathway (Figure 5) [57, 58, 59].
NOTCH pathway.
Based upon the research studies till date there is a clear evidence portraying that the high risk HPV types are well known for causing Head and neck squamous cell carcinoma. The studies have also proved the HPV Viral infection within the different anatomic sites; among the different anatomic sites the oropharyngeal region has a major impact of getting huge amount of viral load thus causing HPV infection. The infected virus further initiates transformation process within the oropharyngeal region such as the oropharynx (51%), pharynx (5%), and oral cavity (9%). The viral makeover within the oral cavity occurs in the tonsillar crypt epithelium and integrates within the human genome. Estimates have shown that there accounts huge amount of HPV viral-cellular entry within the tonsillar crypt epithelium. Several studies have revealed that there occurs physiological differences between HPV-positive and HPV-negative HNSCC, thus differing with respect to clinical behaviour. Certain risk factors influence HPV-positive and HPV-negative HNSCC. The HPV-negative oral cavity cancer is attributed to chewing of areca nut products, betel leaf (the leaf of Piper betel), slaked lime and/or tobacco. Smoking is also contributed to causing HPV-negative HNSCC. The HPV-positive risk factors include continuous infection with HPV and EBV which usually arise in the cancers of Oropharynx and Nasopharynx. HPV infections occur in higher rate mainly due to oral sex, and people who have not been vaccinated. Research findings have revealed that there occurs difference in genes being mutated in HPV-positive and HPV-negative HNSCC. The most common genes mutated within HPV-positive and HPV-negative HNSCC include
ADAM | a disintegrin and metalloproteinases |
AJUBA | Ajuba LIM Protein |
AKT1 | v-akt murine thymoma viral oncogenes homolg 1 |
ALDH1 | aldehyde dehydrogenase 1 |
APOBEC | apolipoprotein B mRNA-editing enzyme catalytic polypeptide |
ARID1A | AT-rich interaction domain 1A |
ATG13 | autophagy-related protein 13 |
ATM | ataxia telangiectasia mutated |
BIRC2 | baculoviral IAP repeat containing 2 |
BRCA2 | BReast CAncer gene 2 |
CASP8 | cysteine-aspartic acid protease (caspase) family |
CCND1 | cyclin D1 |
CD133 | cluster of differentiation 133 |
CD44 | cluster of differentiation 44 |
CD56 | cluster of differentiation 56 |
CDH10 | Cadherin 10 |
CDK4 | cyclin-dependent kinase 4 |
CDK6 | cell division protein kinase 6 |
CDKN2A | cyclin-dependent kinase inhibitor 2A |
CSMD1 | CUB and Sushi multiple domains 1 |
CTTN | cortactin |
DAPK | death-associated protein kinase 1 |
E2F1 | E2F transcription factor 1 |
ECAD | epithelial cadherin (E-cadherin) |
E-FABP | epidermal fatty acid binding protein |
EGFR | epidermal growth factor receptor |
ENPP1 | ectonucleotide pyrophosphatase/phosphodiesterase 1 |
EPHB3 | ephrin type-B receptor 3 |
ERBB2 | receptor tyrosine-protein kinase erbB-2 |
EZH2 | enhancer of Zeste 2 polycomb repressive complex 2 subunit |
FADD | Fas associated via death domain |
FAT1 | FAT atypical cadherin 1 |
FBXW7 | F-box and wd repeat domain containing 7 |
FGFR1 | fibroblast growth factor receptor 1 |
FGFR3 | fibroblast growth factor receptor 3 |
FHIT | fragile histidine triad |
FLG | filaggrin |
HLA I | human leukocyte antigen |
HNSCC | Head and Neck Squamous Cell Carcinoma |
HPV | Human Papillomavirus |
HRAS | Harvey rat sarcoma viral oncogenes homolog |
KEAP1 | Kelch-like ECH-associated protein 1 |
KMT2D | lysine methyltransferase 2D |
LINE | long interspersed elements |
LRP1B | low-density lipoprotein receptor-related protein 1B |
MCM7 | minichromosomal maintenance protein 7 |
MDM2 | mouse double minute 2 homolog |
MGMT | O6-methylguanine DNA methyltransferase |
MICAL2 | Microtubule Associated Monooxygenase Calponin and LIM Domain Containing 2 |
MLL2 | histone-lysine N-methyltransferase MLL2 |
MSH2 | MutS homolog 2 |
MUC16 | Mucin 16 cell surface associated |
MYC | MYC proto-oncogene |
NF1/2 | neurofibromatosis type 1 |
NFE2L2 | nuclear factor erythroid 2-related factor 2 |
NICD | NOTCH intracellular domain |
NLRP12 | NLR Family Pyrin Domain Containing 12 |
NOTCH1 | Notch homolog 1 translocation-associated (Drosophila) |
NRF2 | nuclear factor erythroid 2-related factor 2 |
NRXN3 | Neurexin 3 |
NSD1 | nuclear receptor binding SET domain protein 1 |
OPSCC | Oropharyngeal Squamous Cell Carcinoma |
PARP-1 | poly [ADP-ribose] polymerase 1 |
PCR | Polymerase Chain Reaction |
PD1 | PDCD1; programmed cell death 1 |
PDL1 | programmed cell death ligand 1 |
PI3KCA | phosphatidylinositol-45-bisphosphate 3-kinase catalytic subunit alpha |
PIK3CB | phosphatidylinositol-4,5-Bisphosphate 3-Kinase Catalytic Subunit Beta |
PISH | PCR in situ hybridization |
PTEN | phosphatase and tensin homolog |
RASSF1 | Ras Association Domain Family Member 1 |
Rb | retinoblastoma |
RTKs | receptor tyrosine kinases |
RUFY1 | RUN and FYVE domain containing 1 |
SINE | short interspersed elements |
SMAD4 | SMAD family member 4 mothers against decapentaplegic homolog 4 |
SOX2 | sex determining region Y |
SRC | proto-oncogene tyrosine-protein kinase sarcoma |
SYNE1 | spectrin repeat containing nuclear envelope protein 1 |
TERT | telomerase reverse transcriptase |
THSD7A | thrombospondin type 1 domain containing 7A |
TILs | Tumour infiltrating lymphocytes |
TM7SF3 | transmembrane 7 superfamily member 3 |
TNK2 | tyrosine kinase non receptor 2 |
TP53 | tumour protein p53 |
TRAF3 | TNF receptor associated factor 3 |
TRX | thioredoxin |
TSCC | tongue squamous cell carcinoma |
UBR5 | ubiquitin protein ligase E3 component N-recognin 5 |
UNC5D | Unc-5 netrin receptor D |
USH2A | Usher syndrome type 2A |
YAP1 | yes-associated protein 1 |
ZFHX4 | Zinc Finger Homeobox 4 |
ZNF676 | zinc finger protein 676 |
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\n\nPUBLISHING PROCESS STEPS
\n\nFor a complete overview of all publishing process steps and descriptions, go to How Open Access Publishing Works.
\n\nSEND YOUR PROPOSAL
\n\nIf you are interested in publishing your book with IntechOpen, please submit your book proposal by completing the Publishing Proposal Form.
\n\nNot sure if this is the right option for you? Please refer back to the main Publish with IntechOpen page or feel free to contact us directly at book.department@intechopen.com.
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This would enhance the understanding of the gaps in the field and, hence, provide directions for future research and developments.",book:{id:"8095",slug:"liposomes-advances-and-perspectives",title:"Liposomes",fullTitle:"Liposomes - Advances and Perspectives"},signatures:"Christian Isalomboto Nkanga, Alain Murhimalika Bapolisi, Nnamdi Ikemefuna Okafor and Rui Werner Maçedo Krause",authors:[{id:"284670",title:"Prof.",name:"Rui",middleName:null,surname:"Krause",slug:"rui-krause",fullName:"Rui Krause"},{id:"284672",title:"Mr.",name:"Alain",middleName:null,surname:"Bapolisi",slug:"alain-bapolisi",fullName:"Alain Bapolisi"},{id:"284673",title:"MSc.",name:"Christian",middleName:null,surname:"Nkanga",slug:"christian-nkanga",fullName:"Christian Nkanga"},{id:"284675",title:"Mr.",name:"Okafor",middleName:null,surname:"Nnamdi",slug:"okafor-nnamdi",fullName:"Okafor Nnamdi"}]},{id:"39159",doi:"10.5772/51788",title:"Oxidative Stress in Diabetes Mellitus and the Role Of Vitamins with Antioxidant Actions",slug:"oxidative-stress-in-diabetes-mellitus-and-the-role-of-vitamins-with-antioxidant-actions",totalDownloads:6313,totalCrossrefCites:18,totalDimensionsCites:40,abstract:null,book:{id:"3203",slug:"oxidative-stress-and-chronic-degenerative-diseases-a-role-for-antioxidants",title:"Oxidative Stress and Chronic Degenerative Diseases",fullTitle:"Oxidative Stress and Chronic Degenerative Diseases - A Role for Antioxidants"},signatures:"Maria-Luisa Lazo-de-la-Vega-Monroy and Cristina Fernández-Mejía",authors:[{id:"46162",title:"Dr.",name:"Maria-Luisa",middleName:null,surname:"Lazo-De-La-Vega-Monroy",slug:"maria-luisa-lazo-de-la-vega-monroy",fullName:"Maria-Luisa Lazo-De-La-Vega-Monroy"}]},{id:"52680",doi:"10.5772/65715",title:"Endogenous Antioxidants: A Review of their Role in Oxidative Stress",slug:"endogenous-antioxidants-a-review-of-their-role-in-oxidative-stress",totalDownloads:4039,totalCrossrefCites:13,totalDimensionsCites:32,abstract:"Oxidative stress (OxS) constitutes a disturbance caused by an imbalance between the generation of free radicals and antioxidant system, which causes damage to biomolecules. This, in turn, may lead the body to the occurrence of many chronic degenerative diseases. Therefore, it is very important to know the functioning of those endogenous (and exogenous) antioxidants systems to prevent such diseases. Due to evolutionary conditions in living beings, among other functions have been developed and selected defense systems against the deleterious action of free radicals. Such systems are intrinsic in cells (at level intracellular and extracellular) and act together with the dietary exogenous antioxidants. All these antioxidant systems have very important role in preserving the oxide/reduction equilibrium in the cell. To understand the role of the transcription factor Nrf2 in regulating the processes of antioxidant defense, it must also know the role of many of the endogenous antioxidants that occur because of its activation. Therefore, this chapter makes a literature review of the most important general aspects of endogenous antioxidant systems, which will provide another point of view from which to approach the study and treatment of many chronic degenerative diseases, such as diabetes, hypertension, and Parkinson.",book:{id:"5407",slug:"a-master-regulator-of-oxidative-stress-the-transcription-factor-nrf2",title:"The Transcription Factor Nrf2",fullTitle:"A Master Regulator of Oxidative Stress - The Transcription Factor Nrf2"},signatures:"Tomás Alejandro Fregoso Aguilar, Brenda Carolina Hernández\nNavarro and Jorge Alberto Mendoza Pérez",authors:[{id:"154732",title:"Dr.",name:"Jorge A.",middleName:null,surname:"Mendoza-Pérez",slug:"jorge-a.-mendoza-perez",fullName:"Jorge A. Mendoza-Pérez"},{id:"154908",title:"Dr.",name:"Tomás A.",middleName:null,surname:"Fregoso-Aguilar",slug:"tomas-a.-fregoso-aguilar",fullName:"Tomás A. Fregoso-Aguilar"},{id:"194794",title:"Dr.",name:"Brenda Carolina",middleName:"Carolina",surname:"Hernandez Navarro",slug:"brenda-carolina-hernandez-navarro",fullName:"Brenda Carolina Hernandez Navarro"}]},{id:"52298",doi:"10.5772/65141",title:"NRF2 Rewires Cellular Metabolism to Support the Antioxidant Response",slug:"nrf2-rewires-cellular-metabolism-to-support-the-antioxidant-response",totalDownloads:3931,totalCrossrefCites:11,totalDimensionsCites:23,abstract:"The transcription factor (nuclear factor-erythroid 2 p45-related factor 2, NRF2) is a master regulator of the cellular response to oxidative insults. While antioxidant response enzymes are well-characterized transcriptional targets of NRF2, it is recently becoming clear that NRF2 also supports cellular detoxification through metabolic rewiring to support the antioxidant systems. In this chapter, we discuss the regulation of NRF2 and how NRF2 activation promotes the antioxidant defense of cells. Furthermore, we discuss how reactive oxygen species influence cellular metabolism and how this affects antioxidant function. We also discuss how NRF2 reprograms cellular metabolism to support the antioxidant response and how this functions to funnel metabolic intermediates into antioxidant pathways. This chapter concludes by exploring how these factors may contribute to both normal physiology and disease.",book:{id:"5407",slug:"a-master-regulator-of-oxidative-stress-the-transcription-factor-nrf2",title:"The Transcription Factor Nrf2",fullTitle:"A Master Regulator of Oxidative Stress - The Transcription Factor Nrf2"},signatures:"Ting-Yu Lin, Lewis C. Cantley and Gina M. DeNicola",authors:[{id:"188337",title:"Dr.",name:"Lewis",middleName:null,surname:"Cantley",slug:"lewis-cantley",fullName:"Lewis Cantley"},{id:"188629",title:"Dr.",name:"Gina",middleName:null,surname:"DeNicola",slug:"gina-denicola",fullName:"Gina DeNicola"},{id:"194683",title:"MSc.",name:"Ting-Yu",middleName:null,surname:"Lin",slug:"ting-yu-lin",fullName:"Ting-Yu Lin"}]}],mostDownloadedChaptersLast30Days:[{id:"69775",title:"Principles of Chromatography Method Development",slug:"principles-of-chromatography-method-development",totalDownloads:4227,totalCrossrefCites:5,totalDimensionsCites:10,abstract:"This chapter aims to explain the key parameters of analytical method development using the chromatography techniques which are used for the identification, separation, purification, and quantitative estimation of complex mixtures of organic compounds. Mainly, the versatile techniques of ultra−/high-performance liquid chromatography (UPLC/HPLC) are in use for the analysis of assay and organic impurities/related substances/degradation products of a drug substance or drug product or intermediate or raw material of pharmaceuticals. A suitable analytical method is developed only after evaluating the major and critical separation parameters of chromatography (examples for UPLC/HPLC are selection of diluent, wavelength, detector, stationary phase, column temperature, flow rate, solvent system, elution mode, and injection volume, etc.). The analytical method development is a process of proving the developed analytical method is suitable for its intended use for the quantitative estimation of the targeted analyte present in pharmaceutical drugs. And it mostly plays a vital role in the development and manufacture of pharmaceuticals drugs.",book:{id:"8912",slug:"biochemical-analysis-tools-methods-for-bio-molecules-studies",title:"Biochemical Analysis Tools",fullTitle:"Biochemical Analysis Tools - Methods for Bio-Molecules Studies"},signatures:"Narasimha S. Lakka and Chandrasekar Kuppan",authors:[{id:"304950",title:"Prof.",name:"Chandrasekar",middleName:null,surname:"Kuppan",slug:"chandrasekar-kuppan",fullName:"Chandrasekar Kuppan"},{id:"309984",title:"Mr.",name:"Narasimha S",middleName:null,surname:"Lakka",slug:"narasimha-s-lakka",fullName:"Narasimha S Lakka"}]},{id:"72074",title:"The Chemistry Behind Plant DNA Isolation Protocols",slug:"the-chemistry-behind-plant-dna-isolation-protocols",totalDownloads:3691,totalCrossrefCites:3,totalDimensionsCites:5,abstract:"Various plant species are biochemically heterogeneous in nature, a single deoxyribose nucleic acid (DNA) isolation protocol may not be suitable. There have been continuous modification and standardization in DNA isolation protocols. Most of the plant DNA isolation protocols used today are modified versions of hexadecyltrimethyl-ammonium bromide (CTAB) extraction procedure. Modification is usually performed in the concentration of chemicals used during the extraction procedure according to the plant species and plant part used. Thus, understanding the role of each chemical (viz. CTAB, NaCl, PVP, ethanol, and isopropanol) used during the DNA extraction procedure will benefit to set or modify protocols for more precisions. A review of the chemicals used in the CTAB method of DNA extraction and their probable functions on the highly evolved yet complex to students and researchers has been summarized.",book:{id:"8912",slug:"biochemical-analysis-tools-methods-for-bio-molecules-studies",title:"Biochemical Analysis Tools",fullTitle:"Biochemical Analysis Tools - Methods for Bio-Molecules Studies"},signatures:"Jina Heikrujam, Rajkumar Kishor and Pranab Behari Mazumder",authors:[{id:"74521",title:"Dr.",name:"Rajkumar",middleName:null,surname:"Kishor",slug:"rajkumar-kishor",fullName:"Rajkumar Kishor"},{id:"309357",title:"Prof.",name:"Pranab Behari",middleName:null,surname:"Mazumder",slug:"pranab-behari-mazumder",fullName:"Pranab Behari Mazumder"},{id:"318351",title:"Ph.D. Student",name:"Jina",middleName:null,surname:"Heikrujam",slug:"jina-heikrujam",fullName:"Jina Heikrujam"}]},{id:"64549",title:"Plant Lipid Metabolism",slug:"plant-lipid-metabolism",totalDownloads:2635,totalCrossrefCites:8,totalDimensionsCites:14,abstract:"In plants, the synthesis of fatty acids takes place in the chloroplast and the fatty acid synthase is prokaryotic type. In plants, the structure of membrane lipids is different from that of eukaryotic cells. The membranes of the chloroplasts are essentially formed of galatolipids. This chapter will also focus on the structure and biosynthesis of fatty acids and membrane lipids in plants. Lipids of seeds are essentially composed of TAG; it would be interesting to describe their synthesis during the maturation of the seeds. Some plants contain in their reserve lipids unconventional fatty acids such as gamma linolenic acid in Borrago officinalis L., short-chain fatty acids C: 12 and C: 10, fatty acids with very long chains, and fatty acids that are cyclical. All of these fatty acids can have industrial and/or pharmaceutical applications.",book:{id:"7036",slug:"advances-in-lipid-metabolism",title:"Advances in Lipid Metabolism",fullTitle:"Advances in Lipid Metabolism"},signatures:"Fatiha AID",authors:[{id:"256576",title:"Prof.",name:"Fatiha",middleName:null,surname:"Aid",slug:"fatiha-aid",fullName:"Fatiha Aid"}]},{id:"66369",title:"General Perception of Liposomes: Formation, Manufacturing and Applications",slug:"general-perception-of-liposomes-formation-manufacturing-and-applications",totalDownloads:3283,totalCrossrefCites:16,totalDimensionsCites:39,abstract:"Liposomes are currently part of the most reputed carriers for various molecular species, from small and simple to large and complex molecules. Since their discovery, liposomes have been subject to extensive evolution, in terms of composition, manufacturing and applications, which led to several openings in both basic and applied life sciences. However, most of the advances in liposome research have been more devoted to launching new developments than improving the existing technology for potential implementation. For instance, the evolution of the conventional lipid hydration methods to novel microfluidic technologies has permitted upscale production, but with increase in manufacturing cost and persistent use of organic solvents. This chapter intends to present general concepts in liposome technology, highlighting some longstanding bottlenecks that remain challenging to the preparation, characterization and applications of liposomal systems. This would enhance the understanding of the gaps in the field and, hence, provide directions for future research and developments.",book:{id:"8095",slug:"liposomes-advances-and-perspectives",title:"Liposomes",fullTitle:"Liposomes - Advances and Perspectives"},signatures:"Christian Isalomboto Nkanga, Alain Murhimalika Bapolisi, Nnamdi Ikemefuna Okafor and Rui Werner Maçedo Krause",authors:[{id:"284670",title:"Prof.",name:"Rui",middleName:null,surname:"Krause",slug:"rui-krause",fullName:"Rui Krause"},{id:"284672",title:"Mr.",name:"Alain",middleName:null,surname:"Bapolisi",slug:"alain-bapolisi",fullName:"Alain Bapolisi"},{id:"284673",title:"MSc.",name:"Christian",middleName:null,surname:"Nkanga",slug:"christian-nkanga",fullName:"Christian Nkanga"},{id:"284675",title:"Mr.",name:"Okafor",middleName:null,surname:"Nnamdi",slug:"okafor-nnamdi",fullName:"Okafor Nnamdi"}]},{id:"61865",title:"A Click Chemistry Approach to Tetrazoles: Recent Advances",slug:"a-click-chemistry-approach-to-tetrazoles-recent-advances",totalDownloads:2633,totalCrossrefCites:1,totalDimensionsCites:3,abstract:"Introduction to tetrazole and click chemistry approaches was briefed in a concise way in order to help the readers have a basic understanding. Tetrazole and its derivatives play very important role in medicinal and pharmaceutical applications. The synthesis of tetrazole derivatives can be approached in ecofriendly approaches such as the use of water as solvent, moderate conditions, nontoxic, easy extractions, easy setup, low cost, etc. with good to excellent yields.",book:{id:"6365",slug:"molecular-docking",title:"Molecular Docking",fullTitle:"Molecular Docking"},signatures:"Ravi Varala and Bollikolla Hari Babu",authors:[{id:"212519",title:"Dr.",name:"Varala",middleName:null,surname:"Ravi",slug:"varala-ravi",fullName:"Varala Ravi"},{id:"221476",title:"Dr.",name:"Bollikolla",middleName:null,surname:"Hari Babu",slug:"bollikolla-hari-babu",fullName:"Bollikolla Hari Babu"}]}],onlineFirstChaptersFilter:{topicId:"43",limit:6,offset:0},onlineFirstChaptersCollection:[],onlineFirstChaptersTotal:0},preDownload:{success:null,errors:{}},subscriptionForm:{success:null,errors:{}},aboutIntechopen:{},privacyPolicy:{},peerReviewing:{},howOpenAccessPublishingWithIntechopenWorks:{},sponsorshipBooks:{sponsorshipBooks:[],offset:8,limit:8,total:0},allSeries:{pteSeriesList:[{id:"14",title:"Artificial Intelligence",numberOfPublishedBooks:9,numberOfPublishedChapters:90,numberOfOpenTopics:6,numberOfUpcomingTopics:0,issn:"2633-1403",doi:"10.5772/intechopen.79920",isOpenForSubmission:!0},{id:"7",title:"Biomedical Engineering",numberOfPublishedBooks:12,numberOfPublishedChapters:104,numberOfOpenTopics:3,numberOfUpcomingTopics:0,issn:"2631-5343",doi:"10.5772/intechopen.71985",isOpenForSubmission:!0}],lsSeriesList:[{id:"11",title:"Biochemistry",numberOfPublishedBooks:32,numberOfPublishedChapters:319,numberOfOpenTopics:4,numberOfUpcomingTopics:0,issn:"2632-0983",doi:"10.5772/intechopen.72877",isOpenForSubmission:!0},{id:"25",title:"Environmental Sciences",numberOfPublishedBooks:1,numberOfPublishedChapters:12,numberOfOpenTopics:4,numberOfUpcomingTopics:0,issn:"2754-6713",doi:"10.5772/intechopen.100362",isOpenForSubmission:!0},{id:"10",title:"Physiology",numberOfPublishedBooks:11,numberOfPublishedChapters:141,numberOfOpenTopics:4,numberOfUpcomingTopics:0,issn:"2631-8261",doi:"10.5772/intechopen.72796",isOpenForSubmission:!0}],hsSeriesList:[{id:"3",title:"Dentistry",numberOfPublishedBooks:8,numberOfPublishedChapters:133,numberOfOpenTopics:2,numberOfUpcomingTopics:0,issn:"2631-6218",doi:"10.5772/intechopen.71199",isOpenForSubmission:!0},{id:"6",title:"Infectious Diseases",numberOfPublishedBooks:13,numberOfPublishedChapters:113,numberOfOpenTopics:3,numberOfUpcomingTopics:1,issn:"2631-6188",doi:"10.5772/intechopen.71852",isOpenForSubmission:!0},{id:"13",title:"Veterinary Medicine and Science",numberOfPublishedBooks:11,numberOfPublishedChapters:107,numberOfOpenTopics:3,numberOfUpcomingTopics:0,issn:"2632-0517",doi:"10.5772/intechopen.73681",isOpenForSubmission:!0}],sshSeriesList:[{id:"22",title:"Business, Management and Economics",numberOfPublishedBooks:1,numberOfPublishedChapters:19,numberOfOpenTopics:3,numberOfUpcomingTopics:0,issn:"2753-894X",doi:"10.5772/intechopen.100359",isOpenForSubmission:!0},{id:"23",title:"Education and Human Development",numberOfPublishedBooks:0,numberOfPublishedChapters:5,numberOfOpenTopics:1,numberOfUpcomingTopics:1,issn:null,doi:"10.5772/intechopen.100360",isOpenForSubmission:!0},{id:"24",title:"Sustainable Development",numberOfPublishedBooks:0,numberOfPublishedChapters:16,numberOfOpenTopics:5,numberOfUpcomingTopics:0,issn:null,doi:"10.5772/intechopen.100361",isOpenForSubmission:!0}],testimonialsList:[{id:"6",text:"It is great to work with the IntechOpen to produce a worthwhile collection of research that also becomes a great educational resource and guide for future research endeavors.",author:{id:"259298",name:"Edward",surname:"Narayan",institutionString:null,profilePictureURL:"https://mts.intechopen.com/storage/users/259298/images/system/259298.jpeg",slug:"edward-narayan",institution:{id:"3",name:"University of Queensland",country:{id:null,name:"Australia"}}}},{id:"13",text:"The collaboration with and support of the technical staff of IntechOpen is fantastic. 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Much of biochemistry is devoted to enzymes, proteins that catalyze chemical reactions, enzyme structures, mechanisms of action and their roles within cells. Biochemistry also studies small signaling molecules, coenzymes, inhibitors, vitamins, and hormones, which play roles in life processes. Biochemical experimentation, besides coopting classical chemistry methods, e.g., chromatography, adopted new techniques, e.g., X-ray diffraction, electron microscopy, NMR, radioisotopes, and developed sophisticated microbial genetic tools, e.g., auxotroph mutants and their revertants, fermentation, etc. More recently, biochemistry embraced the ‘big data’ omics systems. Initial biochemical studies have been exclusively analytic: dissecting, purifying, and examining individual components of a biological system; in the apt words of Efraim Racker (1913 –1991), “Don’t waste clean thinking on dirty enzymes.” Today, however, biochemistry is becoming more agglomerative and comprehensive, setting out to integrate and describe entirely particular biological systems. The ‘big data’ metabolomics can define the complement of small molecules, e.g., in a soil or biofilm sample; proteomics can distinguish all the comprising proteins, e.g., serum; metagenomics can identify all the genes in a complex environment, e.g., the bovine rumen. 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Dr. Blumenberg’s research is focused on the epidermis, expression of keratin genes, transcription profiling, keratinocyte differentiation, inflammatory diseases and cancers, and most recently the effects of the microbiome on the skin. He has published more than 100 peer-reviewed research articles and graduated numerous Ph.D. and postdoctoral students.",institutionString:null,institution:{name:"New York University Langone Medical Center",institutionURL:null,country:{name:"United States of America"}}},editorTwo:null,editorThree:null},subseries:{paginationCount:4,paginationItems:[{id:"14",title:"Cell and Molecular Biology",coverUrl:"https://cdn.intechopen.com/series_topics/covers/14.jpg",isOpenForSubmission:!0,editor:{id:"165627",title:"Dr.",name:"Rosa María",middleName:null,surname:"Martínez-Espinosa",slug:"rosa-maria-martinez-espinosa",fullName:"Rosa María Martínez-Espinosa",profilePictureURL:"https://mts.intechopen.com/storage/users/165627/images/system/165627.jpeg",biography:"Dr. Rosa María Martínez-Espinosa has been a Spanish Full Professor since 2020 (Biochemistry and Molecular Biology) and is currently Vice-President of International Relations and Cooperation development and leader of the research group 'Applied Biochemistry” (University of Alicante, Spain). Other positions she has held at the university include Vice-Dean of Master Programs, Vice-Dean of the Degree in Biology and Vice-Dean for Mobility and Enterprise and Engagement at the Faculty of Science (University of Alicante). She received her Bachelor in Biology in 1998 (University of Alicante) and her PhD in 2003 (Biochemistry, University of Alicante). She undertook post-doctoral research at the University of East Anglia (Norwich, U.K. 2004-2005; 2007-2008).\nHer multidisciplinary research focuses on investigating archaea and their potential applications in biotechnology. She has an H-index of 21. She has authored one patent and has published more than 70 indexed papers and around 60 book chapters.\nShe has contributed to more than 150 national and international meetings during the last 15 years. Her research interests include archaea metabolism, enzymes purification and characterization, gene regulation, carotenoids and bioplastics production, antioxidant\ncompounds, waste water treatments, and brines bioremediation.\nRosa María’s other roles include editorial board member for several journals related\nto biochemistry, reviewer for more than 60 journals (biochemistry, molecular biology, biotechnology, chemistry and microbiology) and president of several organizing committees in international meetings related to the N-cycle or respiratory processes.",institutionString:null,institution:{name:"University of Alicante",institutionURL:null,country:{name:"Spain"}}},editorTwo:null,editorThree:null},{id:"15",title:"Chemical Biology",coverUrl:"https://cdn.intechopen.com/series_topics/covers/15.jpg",isOpenForSubmission:!0,editor:{id:"441442",title:"Dr.",name:"Şükrü",middleName:null,surname:"Beydemir",slug:"sukru-beydemir",fullName:"Şükrü Beydemir",profilePictureURL:"https://s3.us-east-1.amazonaws.com/intech-files/0033Y00003GsUoIQAV/Profile_Picture_1634557147521",biography:"Dr. Şükrü Beydemir obtained a BSc in Chemistry in 1995 from Yüzüncü Yıl University, MSc in Biochemistry in 1998, and PhD in Biochemistry in 2002 from Atatürk University, Turkey. He performed post-doctoral studies at Max-Planck Institute, Germany, and University of Florence, Italy in addition to making several scientific visits abroad. He currently works as a Full Professor of Biochemistry in the Faculty of Pharmacy, Anadolu University, Turkey. Dr. Beydemir has published over a hundred scientific papers spanning protein biochemistry, enzymology and medicinal chemistry, reviews, book chapters and presented several conferences to scientists worldwide. He has received numerous publication awards from various international scientific councils. He serves in the Editorial Board of several international journals. Dr. Beydemir is also Rector of Bilecik Şeyh Edebali University, Turkey.",institutionString:null,institution:{name:"Anadolu University",institutionURL:null,country:{name:"Turkey"}}},editorTwo:{id:"13652",title:"Prof.",name:"Deniz",middleName:null,surname:"Ekinci",slug:"deniz-ekinci",fullName:"Deniz Ekinci",profilePictureURL:"https://s3.us-east-1.amazonaws.com/intech-files/0030O00002aYLT1QAO/Profile_Picture_1634557223079",biography:"Dr. Deniz Ekinci obtained a BSc in Chemistry in 2004, MSc in Biochemistry in 2006, and PhD in Biochemistry in 2009 from Atatürk University, Turkey. He studied at Stetson University, USA, in 2007-2008 and at the Max Planck Institute of Molecular Cell Biology and Genetics, Germany, in 2009-2010. Dr. Ekinci currently works as a Full Professor of Biochemistry in the Faculty of Agriculture and is the Head of the Enzyme and Microbial Biotechnology Division, Ondokuz Mayıs University, Turkey. He is a member of the Turkish Biochemical Society, American Chemical Society, and German Genetics society. Dr. Ekinci published around ninety scientific papers, reviews and book chapters, and presented several conferences to scientists. He has received numerous publication awards from several scientific councils. Dr. Ekinci serves as the Editor in Chief of four international books and is involved in the Editorial Board of several international journals.",institutionString:null,institution:{name:"Ondokuz Mayıs University",institutionURL:null,country:{name:"Turkey"}}},editorThree:null},{id:"17",title:"Metabolism",coverUrl:"https://cdn.intechopen.com/series_topics/covers/17.jpg",isOpenForSubmission:!0,editor:{id:"138626",title:"Dr.",name:"Yannis",middleName:null,surname:"Karamanos",slug:"yannis-karamanos",fullName:"Yannis Karamanos",profilePictureURL:"https://s3.us-east-1.amazonaws.com/intech-files/0030O00002g6Jv2QAE/Profile_Picture_1629356660984",biography:"Yannis Karamanos, born in Greece in 1953, completed his pre-graduate studies at the Université Pierre et Marie Curie, Paris, then his Masters and Doctoral degree at the Université de Lille (1983). He was associate professor at the University of Limoges (1987) before becoming full professor of biochemistry at the Université d’Artois (1996). He worked on the structure-function relationships of glycoconjugates and his main project was the investigations on the biological roles of the de-N-glycosylation enzymes (Endo-N-acetyl-β-D-glucosaminidase and peptide-N4-(N-acetyl-β-glucosaminyl) asparagine amidase). From 2002 he contributes to the understanding of the Blood-brain barrier functioning using proteomics approaches. He has published more than 70 papers. His teaching areas are energy metabolism and regulation, integration and organ specialization and metabolic adaptation.",institutionString:null,institution:{name:"Artois University",institutionURL:null,country:{name:"France"}}},editorTwo:null,editorThree:null},{id:"18",title:"Proteomics",coverUrl:"https://cdn.intechopen.com/series_topics/covers/18.jpg",isOpenForSubmission:!0,editor:{id:"200689",title:"Prof.",name:"Paolo",middleName:null,surname:"Iadarola",slug:"paolo-iadarola",fullName:"Paolo Iadarola",profilePictureURL:"https://s3.us-east-1.amazonaws.com/intech-files/0030O00002bSCl8QAG/Profile_Picture_1623568118342",biography:"Paolo Iadarola graduated with a degree in Chemistry from the University of Pavia (Italy) in July 1972. He then worked as an Assistant Professor at the Faculty of Science of the same University until 1984. In 1985, Prof. Iadarola became Associate Professor at the Department of Biology and Biotechnologies of the University of Pavia and retired in October 2017. Since then, he has been working as an Adjunct Professor in the same Department at the University of Pavia. His research activity during the first years was primarily focused on the purification and structural characterization of enzymes from animal and plant sources. During this period, Prof. Iadarola familiarized himself with the conventional techniques used in column chromatography, spectrophotometry, manual Edman degradation, and electrophoresis). Since 1995, he has been working on: i) the determination in biological fluids (serum, urine, bronchoalveolar lavage, sputum) of proteolytic activities involved in the degradation processes of connective tissue matrix, and ii) on the identification of biological markers of lung diseases. In this context, he has developed and validated new methodologies (e.g., Capillary Electrophoresis coupled to Laser-Induced Fluorescence, CE-LIF) whose application enabled him to determine both the amounts of biochemical markers (Desmosines) in urine/serum of patients affected by Chronic Obstructive Pulmonary Disease (COPD) and the activity of proteolytic enzymes (Human Neutrophil Elastase, Cathepsin G, Pseudomonas aeruginosa elastase) in sputa of these patients. More recently, Prof. Iadarola was involved in developing techniques such as two-dimensional electrophoresis coupled to liquid chromatography/mass spectrometry (2DE-LC/MS) for the proteomic analysis of biological fluids aimed at the identification of potential biomarkers of different lung diseases. He is the author of about 150 publications (According to Scopus: H-Index: 23; Total citations: 1568- According to WOS: H-Index: 20; Total Citations: 1296) of peer-reviewed international journals. He is a Consultant Reviewer for several journals, including the Journal of Chromatography A, Journal of Chromatography B, Plos ONE, Proteomes, International Journal of Molecular Science, Biotech, Electrophoresis, and others. He is also Associate Editor of Biotech.",institutionString:null,institution:{name:"University of Pavia",institutionURL:null,country:{name:"Italy"}}},editorTwo:{id:"201414",title:"Dr.",name:"Simona",middleName:null,surname:"Viglio",slug:"simona-viglio",fullName:"Simona Viglio",profilePictureURL:"https://s3.us-east-1.amazonaws.com/intech-files/0030O00002bRKDHQA4/Profile_Picture_1630402531487",biography:"Simona Viglio is an Associate Professor of Biochemistry at the Department of Molecular Medicine at the University of Pavia. She has been working since 1995 on the determination of proteolytic enzymes involved in the degradation process of connective tissue matrix and on the identification of biological markers of lung diseases. She gained considerable experience in developing and validating new methodologies whose applications allowed her to determine both the amount of biomarkers (Desmosine and Isodesmosine) in the urine of patients affected by COPD, and the activity of proteolytic enzymes (HNE, Cathepsin G, Pseudomonas aeruginosa elastase) in the sputa of these patients. Simona Viglio was also involved in research dealing with the supplementation of amino acids in patients with brain injury and chronic heart failure. She is presently engaged in the development of 2-DE and LC-MS techniques for the study of proteomics in biological fluids. The aim of this research is the identification of potential biomarkers of lung diseases. 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Initial biochemical studies have been exclusively analytic: dissecting, purifying, and examining individual components of a biological system; in the apt words of Efraim Racker (1913 –1991), “Don’t waste clean thinking on dirty enzymes.” Today, however, biochemistry is becoming more agglomerative and comprehensive, setting out to integrate and describe entirely particular biological systems. The ‘big data’ metabolomics can define the complement of small molecules, e.g., in a soil or biofilm sample; proteomics can distinguish all the comprising proteins, e.g., serum; metagenomics can identify all the genes in a complex environment, e.g., the bovine rumen. 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Dr. Blumenberg’s research is focused on the epidermis, expression of keratin genes, transcription profiling, keratinocyte differentiation, inflammatory diseases and cancers, and most recently the effects of the microbiome on the skin. 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In recent years, the application of chemistry to biological molecules has gained significant interest in medicinal and pharmacological studies. This topic will be devoted to understanding the interplay between biomolecules and chemical compounds, their structure and function, and their potential applications in related fields. Being a part of the biochemistry discipline, the ideas and concepts that have emerged from Chemical Biology have affected other related areas. 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Behind these definitions are hidden all the aspects of normal and pathological functioning of all processes that the topic ‘Metabolism’ will cover within the Biochemistry Series. 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Thus proteomics, an area of research that detects all protein forms expressed in an organism, including splice isoforms and post-translational modifications, is more suitable than genomics for a comprehensive understanding of the biochemical processes that govern life. The most common proteomics applications are currently in the clinical field for the identification, in a variety of biological matrices, of biomarkers for diagnosis and therapeutic intervention of disorders. From the comparison of proteomic profiles of control and disease or different physiological states, which may emerge, changes in protein expression can provide new insights into the roles played by some proteins in human pathologies. Understanding how proteins function and interact with each other is another goal of proteomics that makes this approach even more intriguing. Specialized technology and expertise are required to assess the proteome of any biological sample. Currently, proteomics relies mainly on mass spectrometry (MS) combined with electrophoretic (1 or 2-DE-MS) and/or chromatographic techniques (LC-MS/MS). MS is an excellent tool that has gained popularity in proteomics because of its ability to gather a complex body of information such as cataloging protein expression, identifying protein modification sites, and defining protein interactions. 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