Accuracy of selection (n > 1) [3].
\\n\\n
Released this past November, the list is based on data collected from the Web of Science and highlights some of the world’s most influential scientific minds by naming the researchers whose publications over the previous decade have included a high number of Highly Cited Papers placing them among the top 1% most-cited.
\\n\\nWe wish to congratulate all of the researchers named and especially our authors on this amazing accomplishment! We are happy and proud to share in their success!
Note: Edited in March 2021
\\n"}]',published:!0,mainMedia:{caption:"Highly Cited",originalUrl:"/media/original/117"}},components:[{type:"htmlEditorComponent",content:'IntechOpen is proud to announce that 191 of our authors have made the Clarivate™ Highly Cited Researchers List for 2020, ranking them among the top 1% most-cited.
\n\nThroughout the years, the list has named a total of 261 IntechOpen authors as Highly Cited. Of those researchers, 69 have been featured on the list multiple times.
\n\n\n\nReleased this past November, the list is based on data collected from the Web of Science and highlights some of the world’s most influential scientific minds by naming the researchers whose publications over the previous decade have included a high number of Highly Cited Papers placing them among the top 1% most-cited.
\n\nWe wish to congratulate all of the researchers named and especially our authors on this amazing accomplishment! We are happy and proud to share in their success!
Note: Edited in March 2021
\n'}],latestNews:[{slug:"webinar-introduction-to-open-science-wednesday-18-may-1-pm-cest-20220518",title:"Webinar: Introduction to Open Science | Wednesday 18 May, 1 PM CEST"},{slug:"step-in-the-right-direction-intechopen-launches-a-portfolio-of-open-science-journals-20220414",title:"Step in the Right Direction: IntechOpen Launches a Portfolio of Open Science Journals"},{slug:"let-s-meet-at-london-book-fair-5-7-april-2022-olympia-london-20220321",title:"Let’s meet at London Book Fair, 5-7 April 2022, Olympia London"},{slug:"50-books-published-as-part-of-intechopen-and-knowledge-unlatched-ku-collaboration-20220316",title:"50 Books published as part of IntechOpen and Knowledge Unlatched (KU) Collaboration"},{slug:"intechopen-joins-the-united-nations-sustainable-development-goals-publishers-compact-20221702",title:"IntechOpen joins the United Nations Sustainable Development Goals Publishers Compact"},{slug:"intechopen-signs-exclusive-representation-agreement-with-lsr-libros-servicios-y-representaciones-s-a-de-c-v-20211123",title:"IntechOpen Signs Exclusive Representation Agreement with LSR Libros Servicios y Representaciones S.A. de C.V"},{slug:"intechopen-expands-partnership-with-research4life-20211110",title:"IntechOpen Expands Partnership with Research4Life"},{slug:"introducing-intechopen-book-series-a-new-publishing-format-for-oa-books-20210915",title:"Introducing IntechOpen Book Series - A New Publishing Format for OA Books"}]},book:{item:{type:"book",id:"785",leadTitle:null,fullTitle:"Rectal Cancer - A Multidisciplinary Approach to Management",title:"Rectal Cancer",subtitle:"A Multidisciplinary Approach to Management",reviewType:"peer-reviewed",abstract:'Dramatic improvements in medicine over the last few years have resulted in more reliable and accessible diagnostics and treatment of rectal cancer. Given the complex physiopathology of this tumor, the approach should not be limited to a single specialty but should involve a number of specialties (surgery, gastroenterology, radiology, biology, oncology, radiotherapy, nuclear medicine, physiotherapy) in an integrated fashion. The subtitle of this book "A Multidisciplinary Approach to Management" encompasses this concept. We have endeavored, with the help of an international group of contributors, to provide an up-to-date and authoritative account of the management of rectal tumor.',isbn:null,printIsbn:"978-953-307-758-1",pdfIsbn:"978-953-51-6518-7",doi:"10.5772/1293",price:139,priceEur:155,priceUsd:179,slug:"rectal-cancer-a-multidisciplinary-approach-to-management",numberOfPages:412,isOpenForSubmission:!1,isInWos:null,isInBkci:!1,hash:"fc9055ea6a9b1f9dc0dea4533e906329",bookSignature:"Giulio Aniello Santoro",publishedDate:"October 10th 2011",coverURL:"https://cdn.intechopen.com/books/images_new/785.jpg",numberOfDownloads:72739,numberOfWosCitations:10,numberOfCrossrefCitations:7,numberOfCrossrefCitationsByBook:2,numberOfDimensionsCitations:19,numberOfDimensionsCitationsByBook:2,hasAltmetrics:0,numberOfTotalCitations:36,isAvailableForWebshopOrdering:!0,dateEndFirstStepPublish:"January 20th 2011",dateEndSecondStepPublish:"February 17th 2011",dateEndThirdStepPublish:"June 24th 2011",dateEndFourthStepPublish:"July 24th 2011",dateEndFifthStepPublish:"November 21st 2011",currentStepOfPublishingProcess:5,indexedIn:"1,2,3,4,5,6",editedByType:"Edited by",kuFlag:!1,featuredMarkup:null,editors:[{id:"63000",title:"Dr.",name:"Giulio A.",middleName:null,surname:"Santoro",slug:"giulio-a.-santoro",fullName:"Giulio A. 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For yet unknown reason, AD often leads also to emotional instability. Neuropathologically, AD brains are characterized by the presence of extracellular fibrillar amyloid beta peptide (Aβ) in amyloid plaques, intraneuronal neurofibrillary tangles consisting of aggregated hyperphosphorylated tau, and elevated brain levels of soluble Aβ oligomers. Plaques and neurofibrillary tangles are observed mostly in the cerebral cortex, but subcortical regions such as nucleus basalis, thalamus, locus coeruleus and raphe nuclei are also affected (Price et al., 1991). The amygdala is another important subcortical region that is severely and consistently affected by pathology in AD. This chapter will discuss the neuropathological features of the amygdala affected by AD and the resulting psychological, emotional and cognitive disturbances in AD patients and in model mice of this disease.
The amygdala is part of the limbic system that plays a major role in the processing and memorizing of emotional reactions (Schafe et al., 2005). The involvement of the amygdala in emotion has been evidenced in monkeys by the overwhelming loss of normal social and affective behavior resulting from bilateral damage to this structure (Izquierdo et al., 2005; Izquierdo and Murray, 2007). The amygdala is affected early in AD and results by neuropsychiatric symptoms leading to functional deficits that greatly contribute to the disability associated with this disease. Due to the early damage to the amygdala, neuropsychiatric symptoms are very common in mild stages of AD. Eventually, approximately 80% of the patients with AD present neuropsychiatric symptoms, such as hallucinations, delusions, paranoia, anxiety, agitation, and affective disturbances during the course of their illness (Mega et al., 1996; Lyketsos et al., 2002). Other symptoms such as dysphoria, irritability, disinhibition and apathy are also common (Kaufer et al., 1998). In addition to these symptoms, AD patients frequently show personality changes that affect their activities of daily living and the interaction with their caregivers. Personality changes may appear in any phase of dementia but often precede other early clinical manifestations of the disease, such as cognitive impairment and mood changes. These changes may therefore help in the clinical diagnosis of AD at early stages (Robins Wahlin and Byrne, 2011). Interestingly, personality changes and some of the neuropsychiatric symptoms (agitation, dysphoria and apathy) are better correlated with the severity of cognitive, functional and behavioral signs than with the patient’s age, gender, education or disease duration (Mega et al., 1996; Talassi et al., 2007). Thus, personality changes and neuropsychiatric symptoms may reflect the impact of progressive brain damage in AD (Robins Wahlin and Byrne, 2011).
Emotional memory is a form of episodic memory defined as memory of arousing emotional events. These memories are sometimes referred to as "flashbulb" memories (Hamann et al., 2000). Results from studies in animals and humans have strongly implicated the amygdala in this memory type (LaBar, 2003; Brierley et al., 2004; Richter-Levin, 2004). While it is recognized that normal people better remember events associated with an emotional component, there is a controversy regarding the strength of emotional memory in AD patients (Satler et al., 2007; Schultz et al., 2009; Huijbers et al., 2011; Nashiro and Mather, 2011; Sundstrom, 2011). Since the amygdala is one of the structures damaged in early stages of the AD pathology, it has been hypothesized that emotional memory should be impaired in AD patients. Indeed, data have shown that unlike healthy individuals, AD patients do not show memory enhancement for emotional events (enhanced memory for emotional compared to neutral stimuli) in spite of normal emotional reactions (Hamann et al., 2000). Notably, the degree of emotional memory impairment has positively been correlated with the extent of the amygdaloid atrophy (Mori et al., 1999a, b; Fleming et al., 2003).
While normal aging primarily affects the prefrontal cortex but relatively spares limbic regions, AD mainly affects limbic regions. The amygdala of AD patients shows a considerable shrinkage, distortion and loss of neurons, and widespread gliosis (Vereecken et al.; Herzog and Kemper, 1980; Cuenod et al., 1993). The amygdaloid atrophy in AD is the result of neuronal death (especially in the magnocellular basolateral amygdalar nuclei group) and loss of dendrites and axons. The accumulation of intraneuronal neurofibrillary tangles, Lewy bodies and extracellular Amyloid β peptide (Aβ) deposits in plaques also contribute significantly to the atrophy. Detailed pathological examination of the amygdala of AD patients reveals that many neurofibrillary tangles and Aβ plaques are located in the accessory basal and cortical nuclei and in the cortical transition area, whereas the mediobasal nucleus is less affected (Kromer Vogt et al., 1990). The medial, lateral, laterobasal and central nuclei are relatively free of neurofibrillary tangles and Aβ plaques (Kromer Vogt et al., 1990). Interestingly, it has been observed that the morphological deformation of the amygdala in AD patients is associated with intrinsic damage to its subnuclei and their reciprocal connectivity with other brain areas. Specifically, it has been reported that amygdaloid nuclei receiving input from and giving rise to hippocampal projections are consistently affected by neuropathological alterations in AD. In contrast, amygdaloid nuclei which receive strong cholinergic input from nucleus basalis of Meynert (e.g. laterobasal nucleus) are less affected (Kromer Vogt et al., 1990). To conclude, histological analysis of the amygdala of AD patients allows a thorough examination of this region thus rendering possible to detect nucleus-specific pathologies. Nevertheless, the major limitation of post-mortem analysis is that it is typically performed on brains taken from patients at late stages of the disease. Thus, information is lacking regarding neuropathological alterations in early stages of AD.
Whereas histological procedures are used to investigate the anatomical complexity of the amygdala in brains from AD patients, a standard magnetic resonance imaging (MRI) technique can only detect few internal details and similar resolution cannot be obtained. The discovery that neuronal loss is a cause of amygdaloid atrophy provided the basis for later studies correlating amygdaloid volumetry, as measured with MRI, with the cognitive status of individual AD patients. Indeed, MRI-based volumetry is now regularly used as a research tool to explore the relationship between amygdaloid volume and the onset and progression of AD (de Leon et al., 1996; Mori et al., 1999a; Vasconcelos et al., 2011). While in the past the use of MRI was limited to clinical studies, the recent rise in MRI accessibility allowed its utilization for non-clinical studies aimed at investigating the involvement of the amygdala in emotion, memory processes and personality (Mori et al., 1999a). The main disadvantage of MRI-based amygdaloid volumetry consists in the difficulty to precisely and reliably delineate the contours of the amygdala
Numerous studies measuring the amygdaloid volume (normalized to intracranial volume) in AD patients at different clinical stages and in healthy age-matched controls showed a correlation of this factor with the neuropsychological performance of each patient. These studies have consistently demonstrated a decrease in amygdaloid volume in AD patients when compared to healthy controls (Horinek et al., 2007; Beacher et al., 2009; Cherubini et al., 2010; Lehmann et al., 2010; Vasconcelos Lde et al., 2011). Importantly, atrophy of the amygdala was found even in preclinical stages of the disease (Fox et al., 1996; Heun et al., 1997; Golebiowski et al., 1999). In fact, in the very early stages of AD, amygdaloid volume reductions were at least as large as hippocampal volume reductions although at this stage some overlap does exist between patients and healthy controls. Still, the volume of the amygdala has been suggested to be an independent variable in predicting conversion from mild cognitive impairment to AD (Liu et al., 2010).
In modern AD research, transgenic mice bearing infrequent mutations leading to familial forms of AD are being used to characterize in details the physiological, morphological and behavioral consequences of AD neuropathology in order to understand the anatomical and synaptic basis of dementia (Selkoe, 1996). These mutations include mutations in amyloid precursor protein (APP), the precursor of the Aβ peptide, or in presenilin (PS) 1 or 2, the catalytic subunit of the gamma secretase complex, which cleaves APP to form Aβ. Transgenic AD mice model represents an important tool to examine the consequences of
Coronal sections through the amygdala and adjacent regions showing the pattern of distribution of amyloid plaques.
In a recent study, transgenic mice expressing a chimeric mouse/human amyloid precursor protein (Mo/HuAPP695swe) and a mutant human presenilin 1 (PS1-dE9) (APP/PS1, Borchelt et al., 1997) were used to study the morphological basis for amygdala-dependent cognitive impairment (Knafo et al., 2009). In this study, the authors first showed a clear impairment of auditory fear conditioning in APP/PS1 mice, a learning task that depends on the lateral nucleus of the amygdala (LA) (Knafo et al., 2009). Importantly, this cognitive deficit did not result from changes in anxiety or sensitivity to shock. Then, the authors used intracellular injection of Alexa594 into projection neurons in the LA, combined with thioflavin-S plaque staining (Fig. 2) and three-dimensional reconstructions of the dendritic trees and spines. The results of this study show that in APP/PS1 mice the morphology of projection neurons in the amygdala is modified, as reflected by changes in dendritic complexity, and that there is a
Intracellular injections
significant decrease in number of large spines on these neurons (Knafo et al., 2009). The authors emphasized the finding that the morphological alteration in dendrites and spines occur mainly in plaque-free areas that occupy most of the neuropil. Thus, as spines are main postsynaptic elements of excitatory synapses in the brain (Gray, 1959) and are fundamental in memory, learning and cognition (Lamprecht and LeDoux, 2004) the authors suggested that these changes, rather than changes detected within plaques contribute to the cognitive impairment seen in APP/PS1 mice.
To summarize, amygdala is significantly and consistently affected by Aβ both in patients with AD and in mouse models of this disease. Therefore, this region is a central participant in the pathology of AD (Unger et al., 1991) and its damage may be the structural substrate to the frequent emotional, psychological, and memory disturbances seen in this devastating disorder.
Selection is one of the important processes for any improvement in farm animals. The breeding merit animal is not often determined by a single character, but more often based on many characters simultaneously. The purpose of selection is to produce elite breeding stocks which act as parents of future generations. The system of selection allows the best animals to act as parents of future generations and culling of undesirable animals from the herd. The animals retained have certain acceptable traits which make them produce more. The breeding of animals is underneath human control, and the breeders decide which individuals shall produce the subsequent generation [1, 2]. The breeding of animals is based upon the fact that certain qualities are genetic; hence valuable qualities are passed on from parents to offspring’s. Due to selection, the qualities of animals can be maintained or improved in the next generation [3]. The purpose of selection is to enhance the frequency of desirable alleles and reduce the frequency of unwanted alleles from the herd which in the long run consequences genetic improvement in livestock. The overall performance of an animal is mainly influenced by the genetic potential that is inherited from its parents and the environment which particularly encompass feeding, health, management and so forth.
Breeding for increased productivity over the past few decades has been very successful in terms of improvement of growth, production and reproduction traits; however, it has also had negative consequences on behavior and welfare [4]. Breeding and genetics are playing an important role in the improvement of domestic animals. Therefore, a broad approach is needed that encompasses both production and welfare traits, even though welfare may not be a primary breeding goal of the selection scheme. Now, in the era of genomics, breeders have lots of opportunities to collect more precise information on the biological impact of certain breeding decisions. This might help breeders to make more accurate decisions in their selection programs. Genomic tools could also facilitate selection for complex traits, which are frequently not possible to measure on a large number of animals. Looking to this the salient features about selection criteria and methods of selection have been discussed in this chapter.
Figure 1 is showing the different type criteria and methods of selection that are applied for the selection of animals for a single trait or multiple traits in animal breeding [5, 6].
Different types of selection [
The manmade selection with certain desirable goal plays important role in the improvement of animal. The different types of artificial selection have been discussed in this chapter along with their merits and demerits. The selection, breeding and propagation of animals by breeders are known as artificial selection. There are two approaches for artificial selection. First is the traditional “breeder’s approach” in which the breeder applies “a known amount of selection to a single phenotypic trait” by examining the selected trait and selecting to breed only those that show superior values” of the trait under selection [7]. The second is called “controlled natural selection,” which is actually natural selection in a controlled environment [8]. The main purpose of animal breeding is not just to improve individual animals genetically but also to improve the future generation of the animal population [9]. The technique or method used by the breeder to make long-term changes in animals is called selection. Selection is the process in which certain individuals in a population are given an opportunity to produce progeny while others are denied this opportunity [10]. It also decides about how many progenies it should produce and how long they should remain in the breeding population. Selection is an important tool for changing gene frequencies to better-fit individuals for a particular purpose. Selection is not an invention of modern man. It has been going on in nature since life existed in the world. Selection is choosing individuals that will be parents of the next generation. The effectiveness of selection depends on the ability to recognize those animals, which possess superior inheritance [11]. Those superior animals must be mated together for the production of offspring. The aids available to estimate the breeding value of an animal is through the phenotype of an animal or its relatives.
Figure 2 is showing the different basis of selection that are commonly used to estimate the probable breeding for the selection of animals for a single trait [3, 5, 6].
Different basis of selection [
Individual selection is most commonly used as a basis for selective improvement in livestock. Individual selection is based on the performance of individual or individual phenotypic value. These animals are selected based on their own phenotype. Individual selection is more effective when the heritability of traits is high, but the effect decreases with falling heritability. It is the simplest, more rapid and most commonly used basis of selection. If proper performance records are maintained then, the traits like body weight, growth rate, fleece production and other parameters of similar nature can be evaluated directly from the performance of individual animals [10, 12].
The animals are kept or rejected for breeding purposes based on their phenotype for a particular trait. The progress made in selection depends on how closely genotype is correlated with the phenotype. The phenotype of the individuals is often used to estimate the breeding value for qualitative traits such as color and horned or polled conditions. Selection for such traits based on mass or phenotype is more effective than others. For example, in Angus cattle, the coat color Red (rr) is recessive to dominant black (BB) color. But it is practically difficult to distinguish and differentiate the genotype BB and Bb phenotypically. Thus, selection based on individuality will be useful but not always completely accurate [4, 13].
These traits are controlled by many genes and are also affected by various environmental factors. There is no sharp distinction among the phenotypes and affected by both additive and non-additive gene action. No trait is 100 per cent heritable, because the environment always affects the phenotype to a certain extent. Therefore, the phenotype of an individual for quantitative traits is not the true indicator of genotype. The phenotypic merit of the individuals for quantitative traits is determined by comparing the individual’s own phenotype with that of the average of all the individuals within a group from which it is selected and is called trait ratio [14, 15, 16].
The trait ratio depends upon the accuracy of records or available data. The individual’s record is of little value unless it shows where the individual ranked relative to others under similar conditions. The environmental part of phenotypic superiority or inferiority will not be transmitted to the offspring or next generation. Therefore, in general, there is a tendency for the average phenotype of the offspring of a phenotypically superior individual will tend to regress toward the average of the population, whereas the average phenotype of the offspring of phenotypically inferior individuals will tend to rise toward the average of the population. Animals own phenotypic value of the character under selection is considered to estimate the probable breeding value (PBV) [5, 13, 14] of that character for that individual.
Where,
Comparison is made with the average of other individuals kept under similar environmental conditions of same age and same time; thus, individuals are ranked relative to others under similar conditions. It is also called as mass selection.
In individual selection, the best animals are selected from within a group of animals of the similar age group that has been reared and treated similarly at the same time, i.e., contemporaries. In individual selection, the breeder will be having a single record of each animal’s performance (performance test) and hence an estimate of probable breeding value (PBV) [13] for a given trait is calculated as:
Where,
Information of individuals to be selected is easily available [3, 5].
Used when pedigree information not available, this is the only available guide for selecting the breeding stock.
Used when generation interval is shorter than progeny testing.
It gives a direct estimation of BV and is more accurate when h2 is high.
Traits such as body type, growth rate, fleece production, horn pattern, color and others of a similar nature can be evaluated if suitable records are available.
Useful for traits expressed in both sexes and performance of the individual is above average for breeding, regardless of the merit of near relatives.
In the absence of pedigree and progeny records, this is the only available guide for selecting the breeding stock.
Not applied for sex-limited traits such as milk production, egg production, maternal abilities, semen production and litter size, etc. [3, 13].
Not applied when traits are expressed in later life/after the death of individual.
Not applied when traits have low heritability, then the individual selection is the poor indicator of breeding value such as reproductive characters.
Not possible for traits expressed only after sexual maturity, because selection has to be delayed till maturity resulting in waste of time and money.
The easy appraisal of appearance often tempts the breeder to overemphasis this evaluation in selection.
It is concluded that the individual selection is based on individual’s phenotype (appearance) and performance. Individuals are selected solely in accordance with their own phenotypic values. This is the simplest and yields more rapid response. It is the most commonly used method for selective improvement of livestock. Undoubtedly, most of the progress in livestock improvement can be credited to individual selection. Traits such as body type, growth rate, fleece production and other of similar nature can be evaluated directly from the performance of the individual animal, if suitable performance records are being kept; such evaluations are usually available by the time initial selection of breeding stock has to be made. In contrast, only a few can be progeny tested.
When the genetic worth or breeding value of animals is determined based on the performance of their ancestors or pedigree information is called as pedigree selection. Pedigree may be a record of an individual’s ancestors associated with it through its parents. Therefore, the selection is based on the information of the ancestors of individuals that are related to it. Performance records from ancestors can provide useful information about the potential genetic worth or the breeding value of the individuals in question. This will give useful information before the animal is old. An estimate of calf’s potential milk yield could be determined based on the milk yield of its mother until such time as the calf is grown up and can be milked. When adequate information on the merit of the individual is not available, then attention is given on pedigree information for selection of individual. From the selection point of view, knowledge of the different economic traits of the ancestors is essential [17].
It’s usual to expect offspring of outstanding parents to be of superior genetic value than the mean of the individuals of the herd. Each parent transmits only sample halves of its genes to every offspring and just one quarter of genes from each grandparent. So, parents never provide the maximum amount of information about the breeding value of a single individual as individual’s performance itself would produce. Unless the performance of the ancestor is well known, selection based on pedigree is meaningless. Distant ancestors of an individual give even less genetic information about the individual’s breeding value especially for production traits. The pedigree is often classified into two as direct and collateral [2]. Collateral means those descended from same ancestors.
Selecting a cow based on the performance of its great grandparent is as good as random selection because the relationship is (0.5)2 = 0.125, i.e., only 1/8th of the superiority can be expected in the progenies. It will not do much good to go beyond three generations into pedigree due to the halving process of the chromosomes in each generation [9].
When the pedigree data provides information on the phenotypic and genotypic merit of the ancestors then it is called performance pedigrees. If the selection differential for the ancestor could be presented in the pedigree or if the performance record of the ancestor could be expressed as a percentage of the average contemporaries (Trait ratio), the ancestor’s records would be of greater predictive value [9, 10].
Figure 3 is showing the different basis of selection that are commonly used to estimate the probable breeding for the selection of animals for a single trait.
Schematic of pedigree selection [
If ancestors are more closely related to the individual (Parent:
In pedigree selection, the PBV [3] of an individual is estimated on the basis of the performance of his ancestors.
Where,
The selection criteria based on the ancestor’s performance is called as the pedigree selection. For pedigree selection, more recent ancestors consider rather than distant.
Ancestral records are not always available.
Recording may be faulty due to stray mating
Most of the characters have low heritability.
The accuracy of pedigree selection when only single information is available for ancestor has been summarized in Table 1.
Ancestor | b | Accuracy of selection (n = 1) |
---|---|---|
Dam | 0.5 h2D | 0.5 hD |
Sire | 0.5 h2s | 0.5 hs |
Mean of both parents | 1/√2 h2 | 1/√2 h |
One grand parent | 0.25 h2 | 0.25 h |
Accuracy of selection (n > 1) [3].
Table 1 summarizes the accuracy of pedigree selection when only single information is available for ancestor (n = 1) [3]. The accuracy of selection based on individuals own record increases, when ancestors’ information (parents and grandparents) is combined with an individual’s own records.
When information of more than one ancestor are available the accuracy of selection increases, which is described in Table 2.
Ancestor | b | Accuracy of selection (n > 1) |
---|---|---|
Dam | 0.5 h2D [n/1 + (n-1)r] | 0.5 √[nh2 D/1 + (n-1)r] |
Sire | 0.5 h2s [n/1 + (n-1)r] | 0.5 √ [nh2 s/1 + (n-1)r] |
Mean of both parents | 1/√2 h2 [n/1 + (n-1)r] | 1/√2 √[nh2/1 + (n-1)r] |
One grand parent | 0.25 h2 [n/1 + (n-1)r] | 0.25 √ [nh2/1 + (n-1)r] |
Accuracy of selection (n = 1) [3].
Table 2 summarizes the accuracy of pedigree selection when information of more than one ancestor (n > 1) [3] is available. This increases the accuracy of selection. The pedigree selection is basically only useful to select the individual before its own records is available.
It is less costly and allows selection at a younger age and provides first-hand information [3, 17].
It helps in multistage selection and is also useful for sex-limited traits.
It is useful when two individuals have similar performance.
The pedigree should be used only as a minor ancestry to individual selection. It may be used to tip the balance between two individuals who are very close on individual merits.
The selection based on pedigree is only useful than of individual selection only when heritability is moderate or low.
All the animals from an inferior pedigree are culled in spite of the fact that an individual may be of good merit and free from recessive alleles [3, 17].
Some pedigrees get favored irrespective of the true merit of the individuals in the population.
Pedigree records are from different environmental conditions.
Pedigree selection provides no basis of selection among the descendants of the same ancestor.
Family is a group of individuals that descended from the same ancestor. Family represents a group of animals having common genetic relationship. In family selection, it is presumed that the ancestor has outstanding merit. In animal breeding, generally, the family is a group of animals having a common genetic relationship. In animal population under random mating, generally half sibs (HS) and full sibs (FS) are the most common collateral relatives, whose records are often used to estimate the breeding value. When individual’s performance is also included in calculating the sibs average performance, it is called family selection. Family selection is very useful in case of traits with low heritability [1, 3].
The selection of individual based on the sibs performance not including individuals own performance.
Based on its sib performance it is of 3 types:
Full sibs, Maternal half sibs, Parental half sib - cousins, uncle/aunt, nephew/niece.
Sib selection is performed when the measurements on the individual are not available. For example, Slaughter traits; Sex limited traits; Threshold traits like disease resistance.
HS selection is preferred over FS selection:
HS are easily available in more number
The rate of inbreeding can be kept low in HS mating as compared to FS
FS selection is more likely to be increased by c-effects
Breeding value of sib selection:
Where,
Breeding value of Family selection:
Heritability of the trait:
Improve the character of low heritability in species with high reproductive rates
It does not allow generation interval to increase.
It supports individual selection because it is better to select an individual from a superior family.
It is costly
It requires a large family size depending on the genetic relationship which is only possible in prolific breeder.
It results in inbreeding and limits the genetic diversity.
Its accuracy depends upon the genetic relationship among the family members.
The selection criteria for evaluating an individual based on his progeny performance is known as Progeny selection or progeny testing. Progeny testing is the most important and one of the best criteria of selection. It is regarded as a form of family selection since progenies are the family members of each other. Progeny selection is very useful in the case of sex-limited traits. Such traits are milk yield and fat percentage in cattle and goat, litter size and litter weight at weaning in pigs and egg production in poultry etc. [20]. Progeny selection is also useful for the evaluation of an individual for carcass quality traits which could only be recorded after slaughter. The various functions or equations (sire indices) are used for the estimation of breeding value of individual. The accuracy of progeny testing is depending on number of progenies tested, heritability of traits and the environmental correlation between the records of different progeny [5].
Each progeny of an individual inherits half of the genes. Hence, the breeding value of the parent is twice the mean deviation of the progenies from population mean.
Points to be considered in Progeny testing:
Test as many as sires as possible (5 to 10 would be minimal) [5, 13]
Make sure that dams are mated to sires at random, within age group as possible.
Produce as many progenies per sire as possible (10 to 15 progenies of either sex for growth traits but up to 300 to 400 progeny is required for traits like calving difficulty and fertility).
No progeny should be culled until the end of the test.
Offspring that are being tested are not a select group.
The performance of an adequate sample of an animal’s progeny under normal environmental conditions will give a true indication of its genotype than any knowledge of individuality or pedigree.
To involve a large number of individuals, Progeny testing should be followed in associated herds.
Five males should be tested to select one Progeny testing breeding bull
Ten female progenies of each bull should be performance tested.
One set of bulls should be completed in two years
Facility for recording performance of progenies
Constraints in Progeny testing:
Small Population Size
Unplanned Mating
Breeding value of Progeny testing
Accuracy of Progeny testing
Where, r is Coefficient of relationship between sire and his progeny, n is Number of progenies, Pi is Mean performance of progenies of ith sire, Pc is Mean performance of contemporaries of progenies of ith sire, h2 is Heritability of the trait
The choice of records for the optimum breeding program for low and high heritable traits has been summarized in [5, 14, 21] (Table 3).
Restriction on Records | Heritability | ||
---|---|---|---|
Low (h2 < 0.20) | High (h2 > 0.40) | ||
For selection of Males: | |||
1 | None | Progeny | Own |
2. | Females only (i.e., MY) | Progeny | Progeny, maternal relative |
3 | Relative only (i.e., carcass traits) | Progeny | Sibs, progeny |
For selection of Females: | |||
1 | None | Own, Pedigree | Own |
2. | Males only (i.e., Semen Production) | Sibs, Pedigree | Sibs, Pedigree |
3 | Relative only (i.e., carcass traits) | Sibs, Pedigree | Sibs |
Table 3 [4, 9] summarizes the appropriate criteria for selection male and female for optimum breeding program under different restrictions of records for low and high heritable traits.
Advantages of Progeny testing:
It is the better method for sex-limited traits, the traits with low heritability and slaughter traits.
The bulls carrier of recessive gene can be identified by mating with its progenies.
It evaluates carcass traits that demands sacrifice of animal.
Progeny testing increases selection intensity.
Its accuracy increases with an increase in the number of progenies.
Limitations/disadvantages of progeny testing:
High cost and time are required.
It increases the generation interval and due to longer generation interval genetic gain per year is low.
It requires an adequate number of progenies to be tested on a bull.
Systems of breeding can be classified into two major groups: Inbreeding and Out breeding [5, 22].
Inbreeding is the mating of animals more closely related to each other than the average relationship with in the population concerned. The mated individual should have one or more common ancestors in their pedigree up to 4–6 generations. Inbreeding includes mating like parent-offspring, brother–sister. Inbreeding is classified into two types: close Inbreeding and line breeding [22].
Close inbreeding is mating between sibs or between parents and progeny to achieve inbred lines with a relatively high degree of homogeneity. Most of the time, we use the full sib mating method. The same effect can be achieved by consistently back crossing the progeny to the younger parents. Line breeding is a milder form of close inbreeding is in which the relationships of mated individual is kept as close as possible to some ancestor. As a general rule sire is not mated to its daughters but half sib mating is made among the offspring of the particular sire. Line breeding was used extensively in the past in development of British breeds of cattle such as Angus, Hereford and Shorthorn [3]. Line breeding should be practiced in purebred populations of the high degree of excellence, after identifying outstanding individuals and it can be advocated to form a new breeds.
Inbreeding is that it makes more pairs of genes in the population homozygous irrespective of the type of gene action involved. Inbreeding does not increase the number of recessive alleles in a population but merely brings to light through increased homozygosity. When the animals are homozygous for several traits, the regularity of inheritance is assured (i.e., it fixes the characteristics). Inbreeding reduces vigor or it results an inbreeding depression.
Despite certain obvious disadvantages of inbreeding, there are certain instances where it may be used as the advantage of livestock production. It is used to maintain genetic purity and thereby to increase prepotency. It is also used to develop inbred lines and also to eliminate undesirable recessives from the population. When a sire is mated to at least twenty of its daughters and does not produce any recessive characters in the offspring, it may conclude that the sire is not heterozygous for recessive characters.
Inbreeding is to be practised only when the herd is better than the average, i.e., when the frequency of desirable genes is more, herd has an outstanding sire, the breeder knows the merits and demerits of inbreeding and the herd is not maintained for commercial purpose.
Out breeding is the mating of animals that are less closely related to each other than the average of the population. Its general, effects are the opposite of those of inbreeding. Out breeding increases the heterozygosity of the individual. The maximum practical usefulness of out breeding systems is the production of animals for market. Out breeding is a form breeding where the mates are chosen based on not being related. The following type of out breeding is used in animal breeding [3, 6].
The selective breeding is used to maintain the purity of the breed along with their improvement. Figure 4 describes the brief information for genetic improvement of indigenous cattle breeds by selective breeding is shown below:
Schematic of selective breeding [
Figure 3 is showing the different basis of selection which are commonly used to estimate the probable breeding for selection of animals for single trait.
It is usually applies only to mating within a pure well-defined breed. If two lines within the same breed are separated for 4 or 5 generations and the sire from one herd is used in another herd that accounts to out crossing. It is used when the genetic variability and there is lack of selection response [3]. It introduces new genes in the population with reference - color, horn type, etc.
It refers to the use of highly inbred sires to the dams of the base population or non-inbred population within the same breed. It usually refers to the best sire in a pedigree. It also refers to the continued use of sires to different families within a pure bred, same breed or different breed [3, 5].
Grading up or upgrading is the repeated use of pure breed sire (or sires) over females of non-descript population. There is a noticed improvement in crosses if sires from a particular breed (A) are repeatedly back crossed to another breed/non-descript animals (B). Five generations are sufficient to raise the level of inheritance of breed A to 96.9% (0.969) in the fifth generation. After five generations of repeated back crossing to a particular breed, the animals after the end of fifth generation become eligible to be registered as purebred. After 7 to 8 generations of continuous grading up the non descript population will be transferred into well defined purebreed [3, 4].
The level of inheritance (%) of pure-bred male and non-descript in different generation under upgradation program is summarizes below in the [4, 5] (Table 4).
Generation | Level of inheritance (%) | |
---|---|---|
Pure breed male (A) | Non-descript females (B) | |
First generation | 50.00 | 50.00 |
Second generation | 75.00 | 25.00 |
Third generation | 87.50 | 12.50 |
Fourth generation | 93.75 | 6.25 |
Fifth generation | 96.87 | 3.13 |
Sixth generation | 98.44 | 1.56 |
Seventh generation | 99.24 | 0.76 |
Eighth generation | 99.62 | 0.38 |
Table 4 [4, 5] summarizes the change in the per cent level of inheritance of pure-bred male and non-descript female in different generation under upgradation program. By the successive backcrossing from one population into another population over generation after generation (7–8 generations), the non-descript population can be substituted by pure bred population.
The representative model for upgrading the local cattle by frozen semen and nucleus breeding unit is summarized in [4, 5] (Figure 5).
Representative model for upgrading the local cattle by frozen semen and nucleus breeding unit [
Cross breeding is mating of two individuals from different distinct breeds. In recent years, crossbreeding has been used for development of new breeds or synthetics strain. For example: Santa Gertrudis, Jamaica Hope, Norwegian Red and White, Australian Milking Zebu, Hissardale, Karan Swiss, Sunandini, Taylor breed etc. [4, 5]. The representative diagram for genetic improvement of non-descript zebu cattle by crossbreeding is shown in Figure 6.
Representative cross for genetic improvement of non-descript zebu cattle by crossbreeding unit [
Crosses of animals from different breeds result in offspring whose level of production is above that of the average of the parents. The increased production may be due to increased fertility, increased pre and post-natal viability, faster and more efficient growth, improved mothering ability, etc. The increased level of performance as compared to the average of the parents is known as heterosis or hybrid vigor. Heterosis is due to non-additive gene action. The breeds or lines with good nicking ability or combining ability are crossed to exploit heterosis.
In any species of livestock, the primary aim of breeder is to improve the production traits. In these traditional methods of selection along with intervention of recent molecular techniques has paved the way to exploit the genetic potential of animals upto certain limit. However, in this rapid race of genomics ethical and environmental issues should be taken into consideration.
Supporting women in scientific research and encouraging more women to pursue careers in STEM fields has been an issue on the global agenda for many years. But there is still much to be done. And IntechOpen wants to help.
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\n\nWe aim to publish 100 books in our Women in Science program over the next three years. We are looking for books written, edited, or co-edited by women. Contributing chapters by men are welcome. As always, the quality of the research we publish is paramount.
\n\nAll project proposals go through a two-stage peer review process and are selected based on the following criteria:
\n\nPlus, we want this project to have an impact beyond scientific circles. We will publicize the research in the Women in Science program for a wider general audience through:
\n\nInterested? If you have an idea for an edited volume or a monograph, we’d love to hear from you! Contact Ana Pantar at book.idea@intechopen.com.
\n\n“My scientific path has given me the opportunity to work with colleagues all over Europe, including Germany, France, and Norway. Editing the book Graph Theory: Advanced Algorithms and Applications with IntechOpen emphasized for me the importance of providing valuable, Open Access literature to our scientific colleagues around the world. So I am highly enthusiastic about the Women in Science book collection, which will highlight the outstanding accomplishments of women scientists and encourage others to walk the challenging path to becoming a recognized scientist." Beril Sirmacek, TU Delft, The Netherlands
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Generally, the phytochemical constituents of plants fall into two categories based on their role in basic metabolic processes, namely primary and secondary metabolites. Primary plant metabolites are involved in basic life functions; therefore, they are more or less similar in all living cells. On the other hand, secondary plant metabolites are products of subsidiary pathways as the shikimic acid pathway. In the course of studying, the medicinal effect of herbals is oriented towards the secondary plant metabolites. Secondary plant metabolites played an important role in alleviating several aliments in the traditional medicine and folk uses. In modern medicine, they provided lead compounds for the production of medications for treating various diseases from migraine up to cancer. Secondary plant metabolites are classified according to their chemical structures into various classes. In this chapter, we will be presenting various classes of secondary plant metabolites, their distribution in different plant families and their important medicinal uses.",book:{id:"6302",slug:"herbal-medicine",title:"Herbal Medicine",fullTitle:"Herbal Medicine"},signatures:"Rehab A. Hussein and Amira A. El-Anssary",authors:[{id:"212117",title:"Dr.",name:"Rehab",middleName:null,surname:"Hussein",slug:"rehab-hussein",fullName:"Rehab Hussein"},{id:"221140",title:"Dr.",name:"Amira",middleName:null,surname:"El-Anssary",slug:"amira-el-anssary",fullName:"Amira El-Anssary"}]},{id:"64851",doi:"10.5772/intechopen.80348",title:"Herbal Medicines in African Traditional Medicine",slug:"herbal-medicines-in-african-traditional-medicine",totalDownloads:14238,totalCrossrefCites:30,totalDimensionsCites:53,abstract:"African traditional medicine is a form of holistic health care system organized into three levels of specialty, namely divination, spiritualism, and herbalism. The traditional healer provides health care services based on culture, religious background, knowledge, attitudes, and beliefs that are prevalent in his community. Illness is regarded as having both natural and supernatural causes and thus must be treated by both physical and spiritual means, using divination, incantations, animal sacrifice, exorcism, and herbs. Herbal medicine is the cornerstone of traditional medicine but may include minerals and animal parts. The adjustment is ok, but may be replaced with –‘ Herbal medicine was once termed primitive by western medicine but through scientific investigations there is a better understanding of its therapeutic activities such that many pharmaceuticals have been modeled on phytochemicals derived from it. Major obstacles to the use of African medicinal plants are their poor quality control and safety. Traditional medical practices are still shrouded with much secrecy, with few reports or documentations of adverse reactions. However, the future of African traditional medicine is bright if viewed in the context of service provision, increase of health care coverage, economic potential, and poverty reduction. Formal recognition and integration of traditional medicine into conventional medicine will hold much promise for the future.",book:{id:"6302",slug:"herbal-medicine",title:"Herbal Medicine",fullTitle:"Herbal Medicine"},signatures:"Ezekwesili-Ofili Josephine Ozioma and Okaka Antoinette Nwamaka\nChinwe",authors:[{id:"191264",title:"Prof.",name:"Josephine",middleName:"Ozioma",surname:"Ezekwesili-Ofili",slug:"josephine-ezekwesili-ofili",fullName:"Josephine Ezekwesili-Ofili"},{id:"211585",title:"Prof.",name:"Antoinette",middleName:null,surname:"Okaka",slug:"antoinette-okaka",fullName:"Antoinette Okaka"}]},{id:"54028",doi:"10.5772/67291",title:"Chemical Composition and Biological Activities of Mentha Species",slug:"chemical-composition-and-biological-activities-of-mentha-species",totalDownloads:7483,totalCrossrefCites:13,totalDimensionsCites:47,abstract:"The genus Mentha L. (Lamiaceae) is distributed all over the world and can be found in many environments. Mentha species, one of the world’s oldest and most popular herbs, are widely used in cooking, in cosmetics, and as alternative or complementary therapy, mainly for the treatment of gastrointestinal disorders like flatulence, indigestion, nausea, vomiting, anorexia, and ulcerative colitis. Furthermore, it is well documented that the essential oil and extracts of Mentha species possess antimicrobial, fungicidal, antiviral, insecticidal, and antioxidant properties. The economic importance of mints is also evident; mint oil and its constituents and derivatives are used as flavoring agents throughout the world in food, pharmaceutical, herbal, perfumery, and flavoring industry. To provide a scientific basis for their traditional uses, several studies have been conducted to determine the chemical composition of mints and assess their biological activities. This chapter describes the therapeutic effects and uses of Mentha species and their constituents, particularly essential oils and phenolic compounds; some additional biological activities will also be considered.",book:{id:"5612",slug:"aromatic-and-medicinal-plants-back-to-nature",title:"Aromatic and Medicinal Plants",fullTitle:"Aromatic and Medicinal Plants - Back to Nature"},signatures:"Fatiha Brahmi, Madani Khodir, Chibane Mohamed and Duez Pierre",authors:[{id:"193281",title:"Dr.",name:"Fatiha",middleName:null,surname:"Brahmi",slug:"fatiha-brahmi",fullName:"Fatiha Brahmi"},{id:"199693",title:"Prof.",name:"Khodir",middleName:null,surname:"Madani",slug:"khodir-madani",fullName:"Khodir Madani"},{id:"199694",title:"Prof.",name:"Pierre",middleName:null,surname:"Duez",slug:"pierre-duez",fullName:"Pierre Duez"},{id:"203738",title:"Prof.",name:"Mohamed",middleName:null,surname:"Chibane",slug:"mohamed-chibane",fullName:"Mohamed Chibane"}]},{id:"58270",doi:"10.5772/intechopen.72437",title:"Toxicity and Safety Implications of Herbal Medicines Used in Africa",slug:"toxicity-and-safety-implications-of-herbal-medicines-used-in-africa",totalDownloads:3399,totalCrossrefCites:16,totalDimensionsCites:39,abstract:"The use of herbal medicines has seen a great upsurge globally. In developing countries, many patronize them largely due to cultural acceptability, availability and cost. In developed countries, they are used because they are natural and therefore assumed to be safer than allopathic medicines. In recent times, however, there has been a growing concern about their safety. This has created a situation of ambivalence in discussions regarding their use. Some medicinal plants are intrinsically toxic by virtue of their constituents and can cause adverse reactions if inappropriately used. Other factors such as herb-drug interactions, lack of adherence to good manufacturing practice (GMP), poor regulatory measures and adulteration may also lead to adverse events in their use. Many in vivo tests on aqueous extracts largely support the safety of herbal medicines, whereas most in vitro tests on isolated single cells mostly with extracts other than aqueous ones show contrary results and thus continue the debate on herbal medicine safety. It is expected that toxicity studies concerning herbal medicine should reflect their traditional use to allow for rational discussions regarding their safety for their beneficial use. While various attempts continue to establish the safety of various herbal medicines in man, their cautious and responsible use is required.",book:{id:"6302",slug:"herbal-medicine",title:"Herbal Medicine",fullTitle:"Herbal Medicine"},signatures:"Merlin L.K. Mensah, Gustav Komlaga, Arnold D. Forkuo, Caleb\nFirempong, Alexander K. Anning and Rita A. Dickson",authors:[{id:"190435",title:"Dr.",name:"Caleb",middleName:null,surname:"Firempong",slug:"caleb-firempong",fullName:"Caleb Firempong"},{id:"212111",title:"Dr.",name:"Gustav",middleName:null,surname:"Komlaga",slug:"gustav-komlaga",fullName:"Gustav Komlaga"},{id:"217045",title:"Dr.",name:"Arnold Forkuo",middleName:null,surname:"Donkor",slug:"arnold-forkuo-donkor",fullName:"Arnold Forkuo Donkor"},{id:"217049",title:"Prof.",name:"Merlin Lincoln Kwao",middleName:null,surname:"Mensah",slug:"merlin-lincoln-kwao-mensah",fullName:"Merlin Lincoln Kwao Mensah"},{id:"217488",title:"Dr.",name:"Alexander K.",middleName:null,surname:"Anning",slug:"alexander-k.-anning",fullName:"Alexander K. Anning"},{id:"223959",title:"Prof.",name:"Akosua Rita",middleName:null,surname:"Dickson",slug:"akosua-rita-dickson",fullName:"Akosua Rita Dickson"}]},{id:"26489",doi:"10.5772/28224",title:"Alternative and Traditional Medicines Systems in Pakistan: History, Regulation, Trends, Usefulness, Challenges, Prospects and Limitations",slug:"alternative-and-traditional-medicines-systems-in-pakistan-history-regulation-trends-usefulness-chall",totalDownloads:9203,totalCrossrefCites:9,totalDimensionsCites:21,abstract:null,book:{id:"542",slug:"a-compendium-of-essays-on-alternative-therapy",title:"A Compendium of Essays on Alternative Therapy",fullTitle:"A Compendium of Essays on Alternative Therapy"},signatures:"Shahzad Hussain, Farnaz Malik, Nadeem Khalid, Muhammad Abdul Qayyum and Humayun Riaz",authors:[{id:"73162",title:"Dr.",name:"Shahzad",middleName:null,surname:"Hussain",slug:"shahzad-hussain",fullName:"Shahzad Hussain"},{id:"82266",title:"Dr.",name:"Farnaz",middleName:null,surname:"Malik",slug:"farnaz-malik",fullName:"Farnaz Malik"},{id:"124185",title:"Dr.",name:"Humayun",middleName:null,surname:"Riaz",slug:"humayun-riaz",fullName:"Humayun Riaz"},{id:"124186",title:"Mr.",name:"Muhammad Abdul",middleName:null,surname:"Qayyum",slug:"muhammad-abdul-qayyum",fullName:"Muhammad Abdul Qayyum"},{id:"125340",title:"Mr.",name:"Nadeem",middleName:null,surname:"Khalid",slug:"nadeem-khalid",fullName:"Nadeem Khalid"}]}],mostDownloadedChaptersLast30Days:[{id:"64851",title:"Herbal Medicines in African Traditional Medicine",slug:"herbal-medicines-in-african-traditional-medicine",totalDownloads:14207,totalCrossrefCites:30,totalDimensionsCites:52,abstract:"African traditional medicine is a form of holistic health care system organized into three levels of specialty, namely divination, spiritualism, and herbalism. The traditional healer provides health care services based on culture, religious background, knowledge, attitudes, and beliefs that are prevalent in his community. Illness is regarded as having both natural and supernatural causes and thus must be treated by both physical and spiritual means, using divination, incantations, animal sacrifice, exorcism, and herbs. Herbal medicine is the cornerstone of traditional medicine but may include minerals and animal parts. The adjustment is ok, but may be replaced with –‘ Herbal medicine was once termed primitive by western medicine but through scientific investigations there is a better understanding of its therapeutic activities such that many pharmaceuticals have been modeled on phytochemicals derived from it. Major obstacles to the use of African medicinal plants are their poor quality control and safety. Traditional medical practices are still shrouded with much secrecy, with few reports or documentations of adverse reactions. However, the future of African traditional medicine is bright if viewed in the context of service provision, increase of health care coverage, economic potential, and poverty reduction. Formal recognition and integration of traditional medicine into conventional medicine will hold much promise for the future.",book:{id:"6302",slug:"herbal-medicine",title:"Herbal Medicine",fullTitle:"Herbal Medicine"},signatures:"Ezekwesili-Ofili Josephine Ozioma and Okaka Antoinette Nwamaka\nChinwe",authors:[{id:"191264",title:"Prof.",name:"Josephine",middleName:"Ozioma",surname:"Ezekwesili-Ofili",slug:"josephine-ezekwesili-ofili",fullName:"Josephine Ezekwesili-Ofili"},{id:"211585",title:"Prof.",name:"Antoinette",middleName:null,surname:"Okaka",slug:"antoinette-okaka",fullName:"Antoinette Okaka"}]},{id:"61866",title:"Plants Secondary Metabolites: The Key Drivers of the Pharmacological Actions of Medicinal Plants",slug:"plants-secondary-metabolites-the-key-drivers-of-the-pharmacological-actions-of-medicinal-plants",totalDownloads:8875,totalCrossrefCites:56,totalDimensionsCites:140,abstract:"The vast and versatile pharmacological effects of medicinal plants are basically dependent on their phytochemical constituents. Generally, the phytochemical constituents of plants fall into two categories based on their role in basic metabolic processes, namely primary and secondary metabolites. Primary plant metabolites are involved in basic life functions; therefore, they are more or less similar in all living cells. On the other hand, secondary plant metabolites are products of subsidiary pathways as the shikimic acid pathway. In the course of studying, the medicinal effect of herbals is oriented towards the secondary plant metabolites. Secondary plant metabolites played an important role in alleviating several aliments in the traditional medicine and folk uses. In modern medicine, they provided lead compounds for the production of medications for treating various diseases from migraine up to cancer. Secondary plant metabolites are classified according to their chemical structures into various classes. In this chapter, we will be presenting various classes of secondary plant metabolites, their distribution in different plant families and their important medicinal uses.",book:{id:"6302",slug:"herbal-medicine",title:"Herbal Medicine",fullTitle:"Herbal Medicine"},signatures:"Rehab A. Hussein and Amira A. El-Anssary",authors:[{id:"212117",title:"Dr.",name:"Rehab",middleName:null,surname:"Hussein",slug:"rehab-hussein",fullName:"Rehab Hussein"},{id:"221140",title:"Dr.",name:"Amira",middleName:null,surname:"El-Anssary",slug:"amira-el-anssary",fullName:"Amira El-Anssary"}]},{id:"77433",title:"Extraction of Bioactive Compounds from Medicinal Plants and Herbs",slug:"extraction-of-bioactive-compounds-from-medicinal-plants-and-herbs",totalDownloads:1266,totalCrossrefCites:2,totalDimensionsCites:5,abstract:"Human beings have relied on herbs and medicinal plants as sources of food and remedy from time immemorial. Bioactive compounds from plants are currently the subject of much research interest, but their extraction as part of phytochemical and/or biological investigations present specific challenges. Herbalists or scientists have developed many protocols of extraction of bioactive ingredients to ensure the effectiveness and the efficacy of crude drugs that were used to get relief from sickness. With the advent of new leads from plants such as morphine, quinine, taxol, artemisinin, and alkaloids from Voacanga species, a lot of attention is paid to the mode of extraction of active phytochemicals to limit the cost linked to the synthesis and isolation. Thus, the extraction of active compounds from plants needs appropriate extraction methods and techniques that provide bioactive ingredients-rich extracts and fractions. The extraction procedures, therefore, play a critical role in the yield, the nature of phytochemical content, etc. This chapter aims to present, describe, and compare extraction procedures of bioactive compounds from herbs and medicinal plants.",book:{id:"10356",slug:"natural-medicinal-plants",title:"Natural Medicinal Plants",fullTitle:"Natural Medicinal Plants"},signatures:"Fongang Fotsing Yannick Stéphane, Bankeu Kezetas Jean Jules, Gaber El-Saber Batiha, Iftikhar Ali and Lenta Ndjakou Bruno",authors:[{id:"224515",title:"Dr.",name:"Fongang Fotsing",middleName:null,surname:"Yannick Stéphane",slug:"fongang-fotsing-yannick-stephane",fullName:"Fongang Fotsing Yannick Stéphane"},{id:"227816",title:"Dr.",name:"Bankeu Kezetas",middleName:null,surname:"Jean Jules",slug:"bankeu-kezetas-jean-jules",fullName:"Bankeu Kezetas Jean Jules"},{id:"227817",title:"Prof.",name:"Lenta Ndjakou",middleName:null,surname:"Bruno",slug:"lenta-ndjakou-bruno",fullName:"Lenta Ndjakou Bruno"},{id:"349790",title:"Prof.",name:"Gaber",middleName:null,surname:"El-Saber Batiha",slug:"gaber-el-saber-batiha",fullName:"Gaber El-Saber Batiha"},{id:"357350",title:"Dr.",name:"Iftikhar",middleName:null,surname:"Ali",slug:"iftikhar-ali",fullName:"Iftikhar Ali"}]},{id:"26491",title:"Homeopathy: Treatment of Cancer with the Banerji Protocols",slug:"homeopathy-treatment-of-cancer-with-the-banerji-protocols",totalDownloads:54048,totalCrossrefCites:1,totalDimensionsCites:2,abstract:null,book:{id:"542",slug:"a-compendium-of-essays-on-alternative-therapy",title:"A Compendium of Essays on Alternative Therapy",fullTitle:"A Compendium of Essays on Alternative Therapy"},signatures:"Prasanta Banerji and Pratip Banerji",authors:[{id:"79939",title:"Dr",name:"Prasanta",middleName:null,surname:"Banerji",slug:"prasanta-banerji",fullName:"Prasanta Banerji"},{id:"79943",title:"Dr.",name:"Pratip",middleName:null,surname:"Banerji",slug:"pratip-banerji",fullName:"Pratip Banerji"}]},{id:"54028",title:"Chemical Composition and Biological Activities of Mentha Species",slug:"chemical-composition-and-biological-activities-of-mentha-species",totalDownloads:7474,totalCrossrefCites:13,totalDimensionsCites:46,abstract:"The genus Mentha L. (Lamiaceae) is distributed all over the world and can be found in many environments. Mentha species, one of the world’s oldest and most popular herbs, are widely used in cooking, in cosmetics, and as alternative or complementary therapy, mainly for the treatment of gastrointestinal disorders like flatulence, indigestion, nausea, vomiting, anorexia, and ulcerative colitis. Furthermore, it is well documented that the essential oil and extracts of Mentha species possess antimicrobial, fungicidal, antiviral, insecticidal, and antioxidant properties. The economic importance of mints is also evident; mint oil and its constituents and derivatives are used as flavoring agents throughout the world in food, pharmaceutical, herbal, perfumery, and flavoring industry. To provide a scientific basis for their traditional uses, several studies have been conducted to determine the chemical composition of mints and assess their biological activities. 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To tackle global challenges of development and environment, the United Nations General Assembly in 2015 adopted the 17 Sustainable Development Goals. SDGs emphasize that environmental sustainability should be strongly linked to socio-economic development, which should be decoupled from escalating resource use and environmental degradation for the purpose of reducing environmental stress, enhancing human welfare, and improving regional equity. Moreover, sustainable development seeks a balance between human development and decrease in ecological/environmental marginal benefits. Under the increasing stress of climate change, many environmental problems have emerged causing severe impacts at both global and local scales, driving ecosystem service reduction and biodiversity loss. Humanity’s relationship with resource exploitation and environment protection is a major global concern, as new threats to human and environmental security emerge in the Anthropocene. 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In recent years, the application of chemistry to biological molecules has gained significant interest in medicinal and pharmacological studies. This topic will be devoted to understanding the interplay between biomolecules and chemical compounds, their structure and function, and their potential applications in related fields. Being a part of the biochemistry discipline, the ideas and concepts that have emerged from Chemical Biology have affected other related areas. This topic will closely deal with all emerging trends in this discipline.",annualVolume:11411,isOpenForSubmission:!0,coverUrl:"https://cdn.intechopen.com/series_topics/covers/15.jpg",editor:{id:"441442",title:"Dr.",name:"Şükrü",middleName:null,surname:"Beydemir",fullName:"Şükrü Beydemir",profilePictureURL:"https://s3.us-east-1.amazonaws.com/intech-files/0033Y00003GsUoIQAV/Profile_Picture_1634557147521",institutionString:null,institution:{name:"Anadolu University",institutionURL:null,country:{name:"Turkey"}}},editorTwo:{id:"13652",title:"Prof.",name:"Deniz",middleName:null,surname:"Ekinci",fullName:"Deniz Ekinci",profilePictureURL:"https://s3.us-east-1.amazonaws.com/intech-files/0030O00002aYLT1QAO/Profile_Picture_1634557223079",institutionString:null,institution:{name:"Ondokuz Mayıs University",institutionURL:null,country:{name:"Turkey"}}},editorThree:null,editorialBoard:[{id:"219081",title:"Dr.",name:"Abdulsamed",middleName:null,surname:"Kükürt",fullName:"Abdulsamed Kükürt",profilePictureURL:"https://mts.intechopen.com/storage/users/219081/images/system/219081.png",institutionString:null,institution:{name:"Kafkas University",institutionURL:null,country:{name:"Turkey"}}},{id:"241413",title:"Dr.",name:"Azhar",middleName:null,surname:"Rasul",fullName:"Azhar Rasul",profilePictureURL:"https://s3.us-east-1.amazonaws.com/intech-files/0030O00002bRT1oQAG/Profile_Picture_1635251978933",institutionString:null,institution:{name:"Government College University, Faisalabad",institutionURL:null,country:{name:"Pakistan"}}},{id:"178316",title:"Ph.D.",name:"Sergey",middleName:null,surname:"Sedykh",fullName:"Sergey Sedykh",profilePictureURL:"https://mts.intechopen.com/storage/users/178316/images/system/178316.jfif",institutionString:null,institution:{name:"Novosibirsk State University",institutionURL:null,country:{name:"Russia"}}}]},{id:"17",title:"Metabolism",keywords:"Biomolecules Metabolism, Energy Metabolism, Metabolic Pathways, Key Metabolic Enzymes, Metabolic Adaptation",scope:"Metabolism is frequently defined in biochemistry textbooks as the overall process that allows living systems to acquire and use the free energy they need for their vital functions or the chemical processes that occur within a living organism to maintain life. Behind these definitions are hidden all the aspects of normal and pathological functioning of all processes that the topic ‘Metabolism’ will cover within the Biochemistry Series. Thus all studies on metabolism will be considered for publication.",annualVolume:11413,isOpenForSubmission:!0,coverUrl:"https://cdn.intechopen.com/series_topics/covers/17.jpg",editor:{id:"138626",title:"Dr.",name:"Yannis",middleName:null,surname:"Karamanos",fullName:"Yannis Karamanos",profilePictureURL:"https://s3.us-east-1.amazonaws.com/intech-files/0030O00002g6Jv2QAE/Profile_Picture_1629356660984",institutionString:null,institution:{name:"Artois University",institutionURL:null,country:{name:"France"}}},editorTwo:null,editorThree:null,editorialBoard:[{id:"243049",title:"Dr.",name:"Anca",middleName:null,surname:"Pantea Stoian",fullName:"Anca Pantea Stoian",profilePictureURL:"https://mts.intechopen.com/storage/users/243049/images/system/243049.jpg",institutionString:null,institution:{name:"Carol Davila University of Medicine and Pharmacy",institutionURL:null,country:{name:"Romania"}}},{id:"203824",title:"Dr.",name:"Attilio",middleName:null,surname:"Rigotti",fullName:"Attilio Rigotti",profilePictureURL:"//cdnintech.com/web/frontend/www/assets/author.svg",institutionString:null,institution:{name:"Pontifical Catholic University of Chile",institutionURL:null,country:{name:"Chile"}}},{id:"300470",title:"Dr.",name:"Yanfei (Jacob)",middleName:null,surname:"Qi",fullName:"Yanfei (Jacob) Qi",profilePictureURL:"https://mts.intechopen.com/storage/users/300470/images/system/300470.jpg",institutionString:null,institution:{name:"Centenary Institute of Cancer Medicine and Cell Biology",institutionURL:null,country:{name:"Australia"}}}]},{id:"18",title:"Proteomics",keywords:"Mono- and Two-Dimensional Gel Electrophoresis (1-and 2-DE), Liquid Chromatography (LC), Mass Spectrometry/Tandem Mass Spectrometry (MS; MS/MS), Proteins",scope:"With the recognition that the human genome cannot provide answers to the etiology of a disorder, changes in the proteins expressed by a genome became a focus in research. Thus proteomics, an area of research that detects all protein forms expressed in an organism, including splice isoforms and post-translational modifications, is more suitable than genomics for a comprehensive understanding of the biochemical processes that govern life. The most common proteomics applications are currently in the clinical field for the identification, in a variety of biological matrices, of biomarkers for diagnosis and therapeutic intervention of disorders. From the comparison of proteomic profiles of control and disease or different physiological states, which may emerge, changes in protein expression can provide new insights into the roles played by some proteins in human pathologies. Understanding how proteins function and interact with each other is another goal of proteomics that makes this approach even more intriguing. Specialized technology and expertise are required to assess the proteome of any biological sample. Currently, proteomics relies mainly on mass spectrometry (MS) combined with electrophoretic (1 or 2-DE-MS) and/or chromatographic techniques (LC-MS/MS). MS is an excellent tool that has gained popularity in proteomics because of its ability to gather a complex body of information such as cataloging protein expression, identifying protein modification sites, and defining protein interactions. The Proteomics topic aims to attract contributions on all aspects of MS-based proteomics that, by pushing the boundaries of MS capabilities, may address biological problems that have not been resolved yet.",annualVolume:11414,isOpenForSubmission:!0,coverUrl:"https://cdn.intechopen.com/series_topics/covers/18.jpg",editor:{id:"200689",title:"Prof.",name:"Paolo",middleName:null,surname:"Iadarola",fullName:"Paolo Iadarola",profilePictureURL:"https://s3.us-east-1.amazonaws.com/intech-files/0030O00002bSCl8QAG/Profile_Picture_1623568118342",institutionString:null,institution:{name:"University of Pavia",institutionURL:null,country:{name:"Italy"}}},editorTwo:{id:"201414",title:"Dr.",name:"Simona",middleName:null,surname:"Viglio",fullName:"Simona Viglio",profilePictureURL:"https://s3.us-east-1.amazonaws.com/intech-files/0030O00002bRKDHQA4/Profile_Picture_1630402531487",institutionString:null,institution:{name:"University of Pavia",institutionURL:null,country:{name:"Italy"}}},editorThree:null,editorialBoard:[{id:"72288",title:"Dr.",name:"Arli Aditya",middleName:null,surname:"Parikesit",fullName:"Arli Aditya Parikesit",profilePictureURL:"https://mts.intechopen.com/storage/users/72288/images/system/72288.jpg",institutionString:null,institution:{name:"Indonesia International Institute for Life Sciences",institutionURL:null,country:{name:"Indonesia"}}},{id:"40928",title:"Dr.",name:"Cesar",middleName:null,surname:"Lopez-Camarillo",fullName:"Cesar Lopez-Camarillo",profilePictureURL:"https://mts.intechopen.com/storage/users/40928/images/3884_n.png",institutionString:null,institution:{name:"Universidad Autónoma de la Ciudad de México",institutionURL:null,country:{name:"Mexico"}}},{id:"81926",title:"Dr.",name:"Shymaa",middleName:null,surname:"Enany",fullName:"Shymaa Enany",profilePictureURL:"https://mts.intechopen.com/storage/users/81926/images/system/81926.png",institutionString:"Suez Canal University",institution:{name:"Suez Canal University",institutionURL:null,country:{name:"Egypt"}}}]}]}},libraryRecommendation:{success:null,errors:{},institutions:[]},route:{name:"chapter.detail",path:"/chapters/41599",hash:"",query:{},params:{id:"41599"},fullPath:"/chapters/41599",meta:{},from:{name:null,path:"/",hash:"",query:{},params:{},fullPath:"/",meta:{}}}},function(){var e;(e=document.currentScript||document.scripts[document.scripts.length-1]).parentNode.removeChild(e)}()