Making Soil More Accessible to Plants: The Case of Plant Growth Promoting Rhizobacteria
By Metin Turan, Nurgül Kıtır, Ülker Alkaya, Adem Günes, Şefik
Tüfenkçi, Ertan Yıldırım and Emrah Nikerel
Plant Growth Promoting Rhizobacteria (PGPR) are beneficial soil bacteria that can live either symbiotically with plants at rhizosphere or as endophytes living on or inside of the host plants. There are two main mechanisms via PGPR contribute to the plant growth. Direct mechanism consists of phytohormone production (i.e. auxins (IAA), cytokinins and gibberellins), biological nitrogen fixation, solubilizing inorganic phosphates, mineralizing organic phosphate and producing organic matter such as amino acids. As indirect mechanisms, PGPR aid plants in combat against the pathogen microorganisms by means of stimulating the disease-resistance mechanism of plants, promote favorable symbiosis, decontaminate the soil of xenobiotics. PGPR can also help plants to cope against abiotic stress by lowering ethylene levels, or against pathogenic microorganism by means of secreting antibacterial/antifungal substances. Exact mechanisms of PGPR characteristics which stimulate the plant growth or product formation are still under investigation, yet in agriculture, PGPR are used as environmental friendly biofertilizers, biocontrol agents or biostimulants. These beneficial bacteria are usually introduced to the plants either in powder or liquid form or the seeds are covered with the inoculants before sowing. Plants are subject to many different environmental elements. Abiotic factors such as drought or water stress have been one of the main plant growth limiting factors. Agricultural PGPR application is an alternative solution against loss due to the environmental stresses, since breeding a plant with stress resistance trait is a very long and tricky process due to the fact that such traits are controlled by multiple genes. PGPR phytohormone and enzyme (i.e. ACC deaminase) production can decrease the stress levels of plants while enhancing the root structures.
Part of the book: Plant Growth
Enzyme Dynamic in Plant Nutrition Uptake and Plant Nutrition
By Metin Turan, Emrah Nikerel, Kerem Kaya, Nurgul Kitir, Adem Gunes,
Negar Ebrahim Pour Mokhtari, Şefik Tüfenkçi, M. Rüştü Karaman
and K. Mesut ÇİMRİN
Soil contains enzymes, constantly interacting with soil constituents, e.g. minerals, rhizosphere and numerous nutrients. Enzymes, in turn, catalyse important biochemical reactions for rhizobacteria and plants, stabilize the soil by degrading wastes and mediate nutrient recycling.The available enzymes inside soil could originate from plants, animals or microbes. The enzymes that are produced from these organism could exhibit intracellular activities, at the cell membrane, interacting therefore with soil and its constituents, or extracellularly (so freely available). Therefore, vis-à-vis to plant nutrition, the (extra or sub) cellular localization has a key role. Typical major enzymes available in soil can be listed as dehydrogenases, hydrogenases, oxidases, catalases, peroxidases, phenol o-hydroxylase, dextransucrase, aminotransferase, rhodanese, carboxylesterase, lipase, phosphatase, nuclease, phytase, arylsulphatase, amylase, cellulase, inulase, xylanase, dextranase, levanase, poly-galacturonase, glucosidase, galactosidase, invertase, peptidase, asparaginase, glutaminase, amidase, urease, aspartate decarboxylase, glutamate decarboxylase and aromatic amino acid decarboxylase. An interesting strategy for improving the nutritional quality of the soil would be to inoculate microorganism to soil while giving attention to mineral or other compounds that affect enzyme activity in soil. Since, some elements or compounds could show both activation and inhibitory effect, such as Fe, Na, etc. metals, the regulation of their bioavailability is crucial.
Part of the book: Enzyme Inhibitors and Activators