Abilities of various anti-cancer drugs to affect PA and RV remodeling.
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Tiefenbacher",publishedDate:null,coverURL:"https://cdn.intechopen.com/books/images_new/10765.jpg",keywords:"Managing Urbanization, Managing Development, Managing Resource Use, Drought Management, Flood Management, Water Quality Monitoring, Air Quality Monitoring, Ecological Monitoring, Modeling Extreme Natural Events, Ecological Restoration, Restoring Environmental Flows, Environmental Management Perspectives",numberOfDownloads:null,numberOfWosCitations:0,numberOfCrossrefCitations:null,numberOfDimensionsCitations:null,numberOfTotalCitations:null,isAvailableForWebshopOrdering:!0,dateEndFirstStepPublish:"January 12th 2021",dateEndSecondStepPublish:"February 9th 2021",dateEndThirdStepPublish:"April 10th 2021",dateEndFourthStepPublish:"June 29th 2021",dateEndFifthStepPublish:"August 28th 2021",remainingDaysToSecondStep:"23 days",secondStepPassed:!1,currentStepOfPublishingProcess:2,editedByType:null,kuFlag:!1,biosketch:"A geospatial scholar working at the interface of natural and human systems, collaborating internationally on innovative studies about hazards and environmental challenges. 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More recently his work pertains to spatial adaptation to climate change, spatial responses in wine growing regions to climate change, the geographies of viticulture and wine, artificial intelligence and machine learning to predict patterns of natural processes and hazards, historical ethnic enclaves in American cities and regions, and environmental adaptations of 19th century European immigrants to North America's landscapes.",institutionString:"Texas State University",position:null,outsideEditionCount:0,totalCites:0,totalAuthoredChapters:"1",totalChapterViews:"0",totalEditedBooks:"6",institution:{name:"Texas State University",institutionURL:null,country:{name:"United States of America"}}}],coeditorOne:null,coeditorTwo:null,coeditorThree:null,coeditorFour:null,coeditorFive:null,topics:[{id:"12",title:"Environmental Sciences",slug:"environmental-sciences"}],chapters:null,productType:{id:"1",title:"Edited Volume",chapterContentType:"chapter",authoredCaption:"Edited by"},personalPublishingAssistant:{id:"194667",firstName:"Marijana",lastName:"Francetic",middleName:null,title:"Ms.",imageUrl:"https://mts.intechopen.com/storage/users/194667/images/4752_n.jpg",email:"marijana@intechopen.com",biography:"As an Author Service Manager my responsibilities include monitoring and facilitating all publishing activities for authors and editors. 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Nowadays, unconventional resources (tight gas, shale gas) are under careful and detailed consideration regarding cognitive works. The world is interested in prospection of unconventional deposits because of the necessity to increase energy resource production and geological limitations regarding conventional deposits. Also, economical aspects are important. Interest in shale gas arises when prices of hydrocarbons are high. In conventional oil and gas deposits, mature rock, reservoir and sealing rock are crucial. Also, geological traps enabling accumulation of hydrocarbons are important. Traditional prospecting by seismic methods and well logging is oriented to find traps and good reservoirs—high porosity and high permeability rocks enabling fluid flow. In shale gas, prospection source and reservoir rock are the same formation. Finding of shale formations is easier than conventional traps, but exploitation of hydrocarbons due to low porosity and very low permeability is more difficult. In shale gas, plays information on rock elastic properties is a crucial issue. An additional element complicating the unconventional shale gas reservoir model is dispersed organic matter (kerogen). New technologies are elaborated to make prospection of shale gas deposit more efficient.
In the paper, there are presented results of laboratory measurements and well logging obtained using conventional (i.e. resistivity and density and acoustic gamma ray logs) and selected modern methods (i.e. geochemical and NMR logs). The goal of the paper is presentation of available method application on contouring and characterization of sweet spots (differentiation between parts of the formation rich in hydrocarbons and surrounding rocks). An example of data interpretation of the Silurian- and Ordovician-age shale formations in the Baltic Basin in Poland is presented.
In the Polish sedimentary basins beginning with the Baltic Basin in the north (Figure 1) to the Lublin Basin in the southeast part of Poland, there are numerous siltstone and mudstone deposits, rich in oil-prone organic matter (Type II kerogen).
Occurrence of the lower palaeozoic fine-grained rocks potentially accumulating shale gas. Small rectangle—study area ([1] modified, [2]).
Shale rocks, rich in organic matter, may be the exploration targets in terms of unconventional hydrocarbon (oil and gas) reservoirs [3–5]. Silurian and Ordovician shales in Poland spread along the western margin of the East European Platform in Lublin, Podlasie and Baltic basins, reaching about 700 km in length [6]. On Łeba elevation where the exemplary boreholes (L-1, K-1, O-2, B-1 and W-1) are located, the sedimentation, organic-rich black shales where the graptolites are the main fossil, started in the Late Llanwirnian reaching Wenlock [7].
The object of the analysis covers two formations, being potentially resources of unconventional hydrocarbons: Ja Member of the Silurian Pa formation and Ordovician Sa formation. Silurian Pa Fm was firstly described by Tomczyk [8]. The formation lithostratotype is the part of the Ko IG-1 well profile. In analyzed wells, the Pa formation is placed between Pr Fm (lower boundary) and Pe Fm (upper boundary). The lower boundary is marked at the point of clear lithological changes involving the replacement of limestone or marl deposits of Ordovician series into clay sediments of the Pa formation. It is clearly visible on the well logs. The lower part of the formation is built by black, bituminous claystones passing to the top into dark grey claystones, laminated by greenish, grey-greenish and black claystones or brown calcareous claystones and bentonite laminas. These sediments contain very large and diverse taxonomic graptolite groups [7, 9]. Sedimentation environment of these strata may be compared with clays/marls formed in the central part of the open or periodically isolated epicontinental shelf with the dominance of environment where coarse-grained material was rarely delivered. An average thickness of the Pa Fm is 20–40 m increasing from east to west and not exceeding 70 m [10]. Ja Mb belongs to the lower part of the Pa Fm and is built of black bituminous claystones. It is characterized by high organic matter content; however, it may not ensure large gas reserves since the thickness of this bed does not exceed 12 m [10]. Geological profile of Gd IG-1 well is proposed as the member of lithostratotype. The lower boundary of the member is also the lower boundary of the Pa formation, while the upper boundary is marked on the profile in the place where grey and dark-grey claystones, laminated with grey-greenish and black claystones, occur. The discussed boundaries are clearly visible on the logs because of the sharp increase of natural radioactivity within the rocks. Ja Member is composed of black claystones containing commonly pyrite and high content of the oil-prone organic matter (total organic carbon (TOC) content up to 7.6 wt.% in O-2 well profile), with dark-grey calcareous laminas and few intercalations of dark-grey marly limestones.
The second object of the interest is the Sa formation, which was fully described by Modliński and Szymański [11, 12]. The formation lithostratotype is proposed as the part of the Za IG-1 well profile. The lower boundary runs on the Ko limestone formation within Llanwirnian and Llandeilian series, while the upper boundary is set by the Pr marl and shale formation within Ashgillian series. Lithology is mainly composed of black, dark grey and grey-greenish bituminous shales (TOC up to 7.2 wt.% in B-1 well profile). In some parts of the formation, bentonite intercalations are present. Moreover, dark grey, grey and grey-greenish marly limestone and marl intercalations are visible. Organic remains, in form of graptolites, are common in this formation [7]. The thickness of the Sa formation increases from the east to west and northwest, from 3.5 to 37 m in land part of the Baltic Basin and from 26.5 to 70 m on the Baltic Sea shelf.
The differences of mineral composition between shale rocks frequently presented in the literature [13] and shale rocks in the study area are shown in Figure 2. In L-1 borehole, there is presented division of the Silurian and Ordovician shales into selected formations. Distinctly visible differences are the reason of slightly different approaches applied to interpretation of the Polish shale gas formations in comparison to other shale plays in the world.
Mineral composition of shale gas formations: (a) well known from the literature (after Ref. [13]), black points—Thistleton reservoir; (b) Polish shales in L-1 well.
The research material consists of the results of petrophysical and geochemical laboratory measurements on core samples and well-logging data [14]. Data were selected as the most representative for the Silurian and Ordovician shale formations in the Baltic Basin. Three of the wells (L-1, K-1 and O-2) are located in the north part of the study area (Figure 1), whereas B-1 and W-1 wells are located more to the south.
The results of petrophysical laboratory measurements composed the dataset of density, bulk density and total porosity from helium pycnometer. Additionally, effective porosity derived from the mercury or helium porosimetry was included. Nuclear magnetic resonance spectroscopy provided information about clay-bound water, capillary-bound water, free water and also total, effective porosity and irreducible water saturation. Absolute permeability was obtained using nitrogen permeameter [14]. Presented laboratory data set is typical for both conventional and unconventional hydrocarbon reservoir investigations.
The organic geochemical analyses oriented to unconventional hydrocarbon deposits study are the same as for characterization of source rocks of conventional oil and gas accumulations. The most useful is Rock-Eval pyrolysis allowing determination inter alia contents of pyrolyzable (PC) and total organic carbon (TOC), free hydrocarbons (S1) and hydrocarbons generated through thermal cracking of non-volatile organic matter (residual hydrocarbons, S2). The temperature of hydrocarbon maximum release during kerogen cracking (Tmax) allows estimation of the thermal maturity and also calculated hydrogen (HI) and production (PI) indices may help in determination of kerogen genetic type and zones of epigenetic hydrocarbons saturation, respectively.
Shales of Sa Fm and Ja Mb are rich in organic matter with the median values of TOC amounting 3.1 and 3.0 wt.%, respectively. The highest TOC contents, 7.2 wt.% in Sa Fm and 7.6 wt.% in Ja Mb, were recorded in B-1 and O-2 well profiles, respectively. The highest TOC medians were recorded in wells located in the north-eastern part of the study area. In these profiles, hydrocarbon potential of analyzed rocks described by HI values was not high and mostly varied from 100 to 200 mg HC/g TOC for both formations. Hydrocarbon potential of Sa Fm and Ja Mb in profiles located south and west (in deeply buried parts of basin) was even lower—HI values usually did not exceed 100 mg HC/g TOC. Observed variability of Rock-Eval parameters and indices between individual profiles for both formations are result of thermal maturity changes: from middle in north-eastern to final stage of oil window in south-western part of the study area.
In the investigated wells, a set of standard logging curves along with more advanced measurements were available (i.e. cross dipole sonic and geochemical logs). Results of the comprehensive interpretation of logs were also included in the analyses [14]. Among all well-logging data, there were selected several that represented the most important properties in petrophysical description of shale formation. They were as follows: natural radioactivity represented by total (GR); spectral gamma ray logs (GRKT) (calibrated sum of the potassium and thorium energy windows); concentration of naturally occurring elemental sources (POTA, THOR, URAN); resistivity of invaded and uninvaded zones measured by shallow and deep laterologs (LLS, LLD); neutron porosity hydrogen index (NPHI); bulk density (RHOB); photoelectric absorption index (PEF) and velocity of compressional and shear waves in the formation expressed by slowness of P and S waves (DTP, DTS). Special meaning had information from geochemical logging: elemental weight fractions (Si, Ca, K, Mg, Al, Ti, Fe, Gd, S, Mn); mineral volume fraction (quartz (QRTZ), calcite (CALC), dolomite (DOLM), pyrite (PYRT), clay minerals (VCL) apart from illite (ILLI) and chlorite (MGCL) and kerogen (KERO)); volume of clay-bound water, gas and free water (CBW, VWF, VGAS); as well as total and effective porosity (PHIT, PHIE) and water saturation (SW). Described data set was not available in all wells; nevertheless, the detailed petrophysical and geochemical analyses of laboratory and well-logging data were carried out on shale gas formations.
Characteristics of the uranium content from spectral gamma ray log and TOC wt.% from laboratory measurements vs. depth in L-1 well are presented in Figure 3a including stratigraphy. It is distinctly visible that Ja Mb of Pa Fm and Sa Fm is different from the adjacent formations.
Distinct well log anomalies in L-1 well: (a) very dense-point laboratory TOC results and U curve from the spectral gamma log; (b) transit interval time, DTP, vs. borehole-corrected resistivity, LLDC; and (c) transit interval time, DTP, vs. bulk density, RHOB.
Transit interval time of P wave, DTP, vs. resistivity, LLDC, and bulk density, RHOB, plots confirmed different features of aforementioned beds (Figure 3b, c). Points from the adjacent formations (Pe Fm, Pa Fm and Pr Fm) and potential sweet spots (Ja Mb and Sa Fm) are composed of separate data sets. Resistivity and bulk density covered the bigger range in sweet spots in comparison to the surrounding formations. DTP decreased with the increase of resistivity in shale formations with limited content of organic matter. Data representing rock material of high volume of organic matter had similar and high DTP values and high resistivity (Figure 3b). In the same rocks, bulk density decreased due to lower density of kerogen (Figure 3c). Discussed formations rich in organic matter, i.e. Ja Mb of Pa Fm and Sa Fm, revealed also differences between each other.
Petrophysical and geochemical parameters from laboratory measurements were the object of analysis in order to create the model of shale gas formations in Poland. Statistical approach allowed to identify the regularities between the parameters in data set.
The average bulk density in L-1 well varied from 2.54 g/cm3 in Ja Mb to about 2.67 g/cm3 in Pr Fm. Distribution of bulk density in Pe Fm from B-1 well is presented in Figure 4a. In this case, bulk density concentrated in the range of 2.6–2.65 g/cm3 in 45% of the samples. Average total porosity from pycnometer in L-1 well was equal to about 3.2% in Ko Fm to about 6.45% in Pa Fm, whereas from NMR spectroscopy from 3.28% in Ko Fm to about 8.62% in Sl Fm. Taking into consideration absolute permeability from permeameter in L-1 well in Pa Formation 75% of values was lower than 0.001 mD. In Pe Fm, the same percentage (75%) comprised plugs with permeability lower than 3.48 mD. Irreducible water saturation from NMR indicated lower values in B-1 well in comparison to L-1 well, where most of the samples were characterized with values above 85%. Average total organic carbon ranged from about 0.07 wt.% in Ko Fm to about 3.8 wt.% in Ja Mb in L-1 well (Figure 4b), while in B-1 well from about 0.20 wt.% in Pr Fm to about 3.37 wt.% in Ja Mb. The amount of free hydrocarbons in both wells was high in Ja Mb of Pa Fm and in Sa Fm (Figure 4b). Regarding mineral content in shale gas formations, Pe Formation was characterized by lower content of clay minerals and higher of quartz, calcite and dolomite than Ja Mb and Sa Fm in L-1 well. The higher amount of pyrite was observed in Pa formation, especially in Ja Mb. The presence of pyrite had a negative influence on measured parameters because it decreased the resistivity and increased density readings. Also, volume of pyrite influenced elastic properties of the rocks. The best deposit parameters (e.g. high porosity and total organic carbon) in all wells were observed in Sa Fm and Pa Fm within shale gas plays.
(a) Histogram of bulk density in Pe Formation, B-1 well. Symbols: N, number of samples; Av., average value‘ St. dev., standard deviation; Max, maximum value; Min, minimum value. (b) Total organic carbon (TOC) in wt.% and the amount of free hydrocarbons (S1) in % from Rock-Eval pyrolysis in various lithostratigraphic units, L-1 well.
Geochemical logging was run over the Silurian and Ordovician intervals where geologists determined several shale formations. As a result, concentrations of 10 elements, Si, Ca, K, Mg, Al, Ti, Fe, Gd, S and Mn, were determined and utilized to characterize each formation. Statistical box plots clearly showed that the investigated shales could be grouped into three types of formation regarding distribution of the elements. The first group was composed of clayey sediments of Pu Fm and Pa Fm including Ja Mb and Sa Fm. Characteristic features of these shale formations were very high concentration of aluminium, reduced amount of calcium and slightly increased amount of iron (Figure 5a). Kc Fm, Pe Fm and Pr Fm formed the second group, where mudstones were present together with claystones. A bit higher content of calcium than in the first group was observed (Figure 5b). Both groups had a significant amount of silicon. The third group was represented only by calcareous mudstones of Re Mb of Kc Fm. It showed the highest concentration of calcium and magnesium with the lowest amount of aluminium and decreased amount of potassium and iron when comparing to the other fine-grained sediments (Figure 5c). It should be pointed that the distribution of elements was very similar to elemental distribution obtained for limestones of Ko Fm. Presented box plots excluded gadolinium content due to other orders of magnitude (ppm vs. percent). The separate box plot for this element (Figure 5d) revealed that two formations considered as sweet spots (Ja Mb and Sa Fm) were characterized by much higher amount of Gd.
Box plots of elements distribution in shale formations from Baltic Basin in Poland: (a) Ja Mb and Pa Fm, (b) Pe Fm, (c) Re Mb and Kc Fm and (d) gadolinium content.
Factor analysis (FA) was applied to logging data from three closely located wells in the Baltic Basin: L-1, O-2 and K-1. FA described a collection of observed variables (i.e. logs) in terms of a smaller collection of (unobservable) latent variables or factors. Achieving meaningful petrophysical interpretation of the logs through the factors helped to understand the complex geophysical responses of organic-rich Polish shales. The input data included parameters measured in wells, results of the comprehensive interpretation of well logs and results of elastic wave velocity and density estimations from Biot-Gassmann model [15]. FA was applied to data from each formation from each well independently and from all wells together. Results revealed very complicated nature of investigated sediments; however, some similarities were observed. For example, in Sa Fm, petrophysical properties represented by the factors were similar in each well, though a slightly different set of logs loaded the factors.
The first factor was always controlled mainly by clay and shale content, the second factor was expressed either by specific minerals (e.g. calcite or pyrite) or by elastic wave velocities and the third factor was represented by organic matter. When this formation was jointly analyzed in all the wells, results confirmed analyses done for the separate wells (Figure 6). However, more often diversity than similarity was observed within one formation between the wells. Figure 7 shows results for Pa Fm from two wells. It can be seen that the appropriate factors were loaded by different logs and were represented by significantly different petrophysical parameters. The case of K-1 well showed that the most important parameters were clay content (first factor), properties of pore space, i.e. porosity and fluids volume (second factor), and organic matter (third factor). In L-1 well, petrophysical interpretation of the first factor was rather unclear, the second factor could be linked to sonic velocity controlled by shale and quartz volumes and the third factor was related to organic matter.
Factor analysis results for (a) Sa Fm in L-1 well and (b) all wells.
Factor analysis results for (a) Pa Fm in K-1 well and (b) Pa Fm in L-1 well.
These examples showed that FA was useful in determination of similarities and differences of shales. Investigated formations displayed significant heterogeneity between each other, between adjacent sediments and from one well to another, but some characteristic features were also observed. FA revealed that the most significant properties in characterization of Polish shales were mineral composition, porosity and fluid volume, mechanical properties and content of organic matter.
Principal component analysis (PCA) was applied for laboratory and well-logging data derived from Silurian and Ordovician intervals drilled in wells L-1, B-1 and W-1. PCA is a multivariate statistical method used to reduce multidimensional data set into lower dimensions. This mathematical operation helps to extract unobservable variable hidden in the original measurements.
In each analyzed well intervals, results were similar. Three to five principal components (PC) were enough for 70–90% of variance explanation. PCA pointed out that about 50% in W-1 and L-1 wells and 70% in B-1 well of information about the data set were contained in spectral gamma logs, neutron logs and acoustic logs. It meant that the main reason for data diversification was shaliness, clay content and porosity of rocks. The next 20–30% of variance was expressed by density and resistivity logs. These parameters could be treated as porosity and saturation logs. The third PC provided information about the presence of organic matter. This was indicated by the high value of correlation coefficient between PC and uranium log. PCA applied to laboratory data showed that the main variance of the data set was associated with hydrocarbon indicators such as TOC, cation exchange capacity (CEC) and parameters from Rock-Eval measurement, i.e. free hydrocarbons content, S1, and hydrocarbons from cracking process, S2. In the second PC, the highest impact was connected with clay mineral content.
Cluster analysis (CA) was used for grouping data and classification according to natural physical features of rocks. CA pointed out preliminary formation classification and gas-bearing identification. It helped to define zones of interests based on well logs and laboratory data criteria and improved characteristic of shales with gas saturation. Several different hierarchical and non-hierarchical methods for cluster creating were applied. As a result, groups that corresponded to the gas-bearing intervals were selected. Diversification between sweet spots and surrounding beds was shown. Complex analysis showed internal diversification in each gas formation.
The input data included laboratory measurement results and well-logging data. In the first step of CA, data from all Ordovician and Silurian formations were included. Result showed that each cluster aggregated data associated mostly with one formation. It meant that all lithostratigraphic units had different physical properties and CA could be the first step in the formation identification.
In the second step of analysis, the CA was performed for Ja Mb and Sa Fm independently (Figure 8). These formations were treated as potential sweet spot intervals. In each formation, internal heterogeneity was found. Diversity was also observed between the same formations in different wells. For example, in L-1 well, the Ja Mb was divided into four groups, whereas in B-1 well it was divided into five groups. In Sa Fm, four clusters were selected in L-1 well and six in B-1 well. Despite this, in both wells clusters with corresponding parameters could be found. In all wells there were distinguished clusters: (a) with high (about 10% and more) kerogen content, small (0–3%) porosity, high (about 70%) clay minerals and small (about 30%) quartz content; (b) with small (about 3%) kerogen content, high (about 10%) porosity, high (about 70%) clay minerals and small (30%) quartz content; (c) with high (about 8%) kerogen content, porosity in range of 0–10%, comparable content of clay minerals and quartz (d) with high (about 8%) kerogen content, average porosity about 6%, small (about 30%) clay minerals and high (about 70%) of quartz content.
Box plots for porosity and kerogen content in each cluster in Ja Mb (left) and Sa Fm (right), well B-1. Symbols: middle point equals median value, box equals first and third quartile and whiskers equal range of non-outlier values.
Summarizing cluster characterization, CA was a good mathematical tool for fast preliminary Polish shale classification. Sweet spots in Polish shales are inhomogeneous; there are intervals with possible gas presence and without (or very poor) gas saturation.
Clay minerals, important components of shales, influence elastic properties of rocks and their anisotropy [16]. Elastic properties depend not only on mineral composition and percentage of selected compounds but also on shape and orientation of grains. Jones and Wang [17] presented the example of the Cretaceous shales from Williston Basin and the results of the experimental measurements of five independent components of elasticity vector, C11, C33, C44, C66 and C13, which characterize the simplest case of anisotropy of hexagonal symmetry, i.e. transverse isotropy (TI) [18]. In the presented work, a synthetic model of the similar shales with organic matter on the basis of the published data was prepared [19, 20]. Elastic parameter modelling and bulk density calculations were done using the theoretical relations by Kuster and Toksöz [21] applying the differential effective medium (DEM) solution [19]. There were used theoretical models of porous formation by Biot-Gassmann [22, 23] and Kuster-Toksöz and the original software Estymacja [15, 24].
An estimation of P- and S-wave velocity and elastic moduli was based on known theoretical formulas of Biot-Gassmann or Kuster-Toksöz [21–23] which describe multiphase media corresponding to rocks with granular structure (grains of solid phase) with porous space saturated with medium (liquid phase or gas phase).
Elastic parameters of rocks are a result of an interaction of all phase components, rock matrix and medium and also depend on the anisotropy of a rock matrix. The Estymacja software allows elastic parameters of the rocks and bulk density to be determined from results of the comprehensive interpretation of well-logging data, i.e. volumes of mineral components, porosity and water, gas and oil saturation in the flushed zone or virgin zone [15, 25]. The final results of Estymacja software in the form of set of curves illustrating variability of P slowness and S slowness (DTP and DTS, respectively), together with neutron porosity, NPHI, bulk density, RHOB, water saturation, SW, natural radioactivity, GR, logs and lithology and VP/VS curves, are presented in Figure 9.
Calculated (red) and measured (black) curves in the Ordovician depth section in L-1 well. Estymacja software and Kuster-Toksöz model were used.
Elastic parameters were calculated for the synthetic model of shale gas formation with organic matter in mineral skeleton or in porous space and formation water and gaseous hydrocarbons in pore space. Passey [20] in his model of shale gas rock divided organic matter into three parts: rock matrix, organic matter component and medium in pore space. Increase of compaction caused that grains revealed tendency to horizontal position and organic matter composed subhorizontal lamellae. On the basis of thin sections, it was proved that organic matter (mainly kerogen) was plastic [20]. Primarily, organic matter was located in the matrix and did not fill the pores. When the maturity increased, kerogen was more mobile and could be intruded into pore space. Models of shale gas formation assumed in modelling are presented in Figure 10.
Models assumed in calculations.
In Model 1, it was assumed that clay, quartz and kerogen were present in skeleton; formation water was in pores. Porous spectra were as follows: αwater = 0.05 and C(αwater) = Φ = 0.05 (Φ, porosity) and water parameters KW = 2.6 GPa and RHOBW = 1.05 g/cm3. In Model 2, it was assumed that kerogen was in porous space with characteristic spectra, αkerogen = C(αkerogon) = Vkerogen (Vkerogen, volume of kerogen) and porous spectra of water, αwater = 0.05 and C(αwater) = Φ = 0.05. In Model 3, it was assumed that kerogen, formation water and gas were located in pores. Velocity of P-waves, VP, as a function of kerogen volume for Models 1 and 2 is presented in Figure 11. Decrease of VP was visible with increase of kerogen and decrease of volume of shale, Vsh, in rock matrix. Similar behaviour was observed for bulk elastic modulus, K, and shear elastic modulus, MI. Calculations were also made in the case when water and gas were present in porous space.
Velocity of P-wave vs. kerogen volume. Model 1 (blue curve) and Models 2 and 3 (other curves). Various kerogen volumes in pore space are marked by different colours.
In Variant 1, it was assumed that water and gas were present in separate pores and pore spectrum was the same: αwater = 0.05 and C(αwater) = Φ = 0.05 and αgas = 0.05 and C(αgas) = Φ = 0.05, what meant porosity Φ = 0.1. In Variant 2 it was assumed that water (SW = 0.8) and gas (SG = 0.2) were a mixture. In both cases, a linear decrease of VP and VS with kerogen volume increase was observed, but in Variant 2 it was higher. Variability of both waves, velocity VS = f(VP) (Figure 12a) and acoustic impedance AIS = f(AIP), was also analyzed (Figure 12b). Data in the plots were related to depth intervals with gas, formation water or saturated with gas and water from the Silurian and Ordovician formations in the L-1 well. Beds of different gas saturations were distinctly visible: yellow and red points meant high gas saturation, and blue points meant formation water saturation.
Relationship between velocity VS vs. VP and acoustic impedance AIS vs. AIP for the selected depth intervals in L-1 well.
Mechanical properties of shale gas formations are crucial in hydraulic fracturing for gas production in low permeability reservoirs. Such rocks are characterized by various brittleness indices [26] which are considered in aspects of mineral composition and elastic properties. Quartz and carbonates in rocks cause increase of brittleness in contrary to shaliness-rich formations where ductile deformations are more frequently observed and skeleton weakness is observed. On the other hand, carbonate cements may limit natural fracture flow ability. High volume of carbonates and presence of swelling clay minerals are the main reasons making difficult production from discussed gas deposits. Young’s modulus or Poisson’s ratio may be used as measures of brittleness index (BI) (Figure 13).
Poisson’s ratio vs. Young’s modulus, K-1 well.
Kerogen influenced measured petrophysical parameters, but shaliness and pores geometry were also important in considering this influence. Changeability of elastic parameters was not distinct with the increase of kerogen volume when it composed mineral skeleton; however, when pores were filled with kerogen, variability of elastic parameters increased. Kerogen in pore space caused decrease of velocity of P- and S-waves as well as elastic moduli K and MI. Increase of kerogen volume caused increase of VP/VS ratio. VS vs. VP and AIS vs. AIP cross plots enabled separation between water-saturated and gas-saturated beds. Shales of higher Young’s modulus values and lower Poisson’s ratio revealed higher brittleness.
Acoustic emission (AE) is an elastic wave generated and propagating in the medium as a result of dynamic processes. Generation of a seismo-acoustic signal is a mechanical process, brought about by diverse mechanisms associated with strain and breaking of the medium (opening and closing of pores, dislocation movements proceeding at variable rate, slippage and friction, plastic and nonplastic deformations), structural changes, phase transitions and chemical reactions and temperature changes.
The basic AE parameters include acoustic activity representing the number of impulses (AE counts) registered in an arbitrarily chosen time window, mean signal energy—the ratio of energy emitted within a given time interval to the number of impulses registered in the same time and cumulative energy—total energy of impulses registered from the beginning of record-taking. AE recordings are utilized for forecasting rock bursts and gas and rock outbursts in coal mines [27]. The test stands for acoustic emission measurement [27], and a single-channel device for seismic-acoustic measurements was designed and engineered as a prototype. The main component is a vacuum-pressure chamber, provided with a steel waveguide and six wires for strain measurements. The chamber is connected to gas bottles and a vacuum pump through a system of tubes and pressure-control valves. Measurement data are saved on a computer connected to the system.
The test facility has been modified since time of measurements made for coal [27]. At first, the integrating system in the seismic-acoustic instrumentation, which calculated the surface area of impulses over a given level of discrimination, would split the entire measurement range of 3 V into 10 identical channels, 300 mV each. When the interface was used, the measurement range was extended to 10 V and is now split into 4000 identical channels, 2.5 mV each. This solution provides a higher resolution energy data; hence, the results give more information about events and allow for detecting even low-energy events. The measuring path allows for monitoring AE impulses in the frequency range from 100 Hz to 1 MHz, with the option for frequency band setting. Within this band single events are detected, and the integral of the positive portion of the measured plot is obtained accordingly. The key component of the measurement circuit is a piezoelectric sensor. Four RL strain gauges were fixed on a shale sample, which was then attached to the waveguide in the pressure-vacuum chamber. Measurement cycles were conducted at the frequency of one per minute. The signal resolution was of the order of 0.001%. The observed acoustic emission patterns do not resemble those registered for coal samples (Figure 14) [28].
Acoustic emission and volumetric strain registered on a shale sample during the sorption of CH4.
In the case of coal samples, the process of AE data acquisition was much faster. Strains measured in the shale were lower by one order of magnitude than those registered for coal, and their variability pattern was different, too. Volumetric strains increased for about 150 h of the sorption process, including the stage of stabilization (around the 100th hour), followed by a strain decline, which was never observed for coal. The analysis of registered strain data revealed that they should be recorded for longer time during sorption. The general conclusion can be drawn that sorption processes in shale are much slower than in coals.
Presented results show that Polish shale formations of the Silurian and Ordovician age are different as regards mineral composition, reservoir properties and elastic parameters. In each formation internal heterogeneity was found. Diversity was also observed within the same formations in different wells. Two selected formations were recognized as potential sweet spots, i.e. Ja Mb and Sa Fm. They are relatively rich in organic matter. Results of the analyses indicate distinctly visible differences between them and surrounding formations (Pe Fm, Pa Fm and Pr Fm).
Applied statistical analyses, i.e. simple statistics, histograms, box plots and also factor analysis, principal component analysis and cluster analysis show themselves as useful tools for proving diversity of shale formations in the study. Research based on the laboratory results, well logs and the outcomes of the comprehensive interpretation of well logging confirmed great diversification of formations in the study but also revealed some regularities. Factor analyses and principal component analyses enabled limitation of great number of logs saving the necessary information to make classification.
Elastic property modelling using theoretical models and results of the comprehensive interpretation of well logs provided estimated velocity of P- and S-waves and bulk density in all wells and helped in completing indispensable information about brittleness of shale gas formations.
Preliminary results of acoustic emission investigations show additional characteristic features of shale gas rock and revealed that acoustic emission and volumetric strain of a shale sample induced by the sorption processes are lower for shale than for coals.
Methodology of laboratory measurements, well data acquisition and processing was only slightly fitted to specific features of shale rocks. Majority of measurements were typical for prospection of conventional hydrocarbon reservoirs. In spite of it, selection of potential sweet spots among adjacent beds was a success.
This study was financed by the National Centre for Research and Development in the programme Blue Gas project, ‘Methodology to determine sweet spots based on geochemical, petrophysical and geomechanical properties in connection with correlation of laboratory test with well logs and generation model 3D’ (MWSSSG) Polskie Technologie dla Gazu Łupkowego. Data for the study were delivered by Polish Oil and Gas Company, Warsaw, Poland. Statistica 12 software was used under the AGH UST grant from StatSoft. Plots and figures were prepared by Teresa Staszowska.
Pulmonary arterial hypertension (PAH) is a fatal disease that can affect both females and males of any age including children. If untreated, increased pulmonary vascular resistance results in right heart failure and kills patients within several years [1, 2]. Even with the currently available therapeutic drugs that are mainly vasodilators, the survival duration of the patients remains unacceptably short [3, 4]. It has been reported that the median survival for patients diagnosed with PAH is 2.8 years from the time of diagnosis (3-year survival: 48%) if untreated [5, 6]. Even with currently available therapies, only 58–75% of PAH patients survive for 3 years [7, 8, 9, 10]. PAH is a progressive disease, and by the time patients are diagnosed, thickening of pulmonary artery (PA) walls and the narrowing of vascular lumen have already developed due to the abnormal growth of pulmonary vascular cells, contributing to the elevated pulmonary vascular resistance and the right ventricle (RV) damage. Therefore, agents that eliminate excess pulmonary vascular wall cells have therapeutic potential, and we hypothesize that the programmed cell death-based therapy using anti-cancer drugs would help treat PAH patients [11]. However, cell death agents could also exert adverse effects including cardiotoxicity, complicating the development of such therapies for PAH patients with the already damaged heart.
\nIn our earlier study, we found that an anthracycline anti-cancer drug daunorubicin (DNR) is an effective agent that can cause apoptosis of cultured PA smooth muscle cells (PASMCs) [11, 12]. Based on these results, we hypothesized that the administration of DNR to rats would result in the reversal of pulmonary vascular remodeling. In these experiments, Sprague-Dawley (SD) rats were treated with chronic hypoxia (10% oxygen) for 2 weeks to promote the thickening of PA medial walls. After the PA wall thickening was developed, rats were injected with DNR and maintained in the hypoxia condition for 3 days. As shown in hematoxylin and eosin (H&E) stain images of Figure 1A, DNR effectively reduced the PA wall thickness [13]. Similarly, in this study, another class of anti-cancer drugs, proteasome inhibitors such as MG132 and bortezomib (Figure 1B) also reduced the PA wall thickening in the chronic hypoxia model of pulmonary hypertension (PH) in rats [13].
\nEffects of programmed cell death-inducing anti-cancer drugs on pulmonary vascular remodeling. (A & B) SD rats were treated with chronic hypoxia for 2 weeks to produce pulmonary vascular thickening and injected with DNR or bortezomib. Rats were then placed back in the hypoxic environment. Three days after the injection, lungs were harvested and H&E staining was performed (Adapted from Ibrahim et al. [13] with permission). (C & D) SD rats were subjected to SU5416/hypoxia to promote PAH. After pulmonary vascular remodeling was developed, rats were injected with CFZ or navitoclax twice a week for 2 weeks. Lungs were harvested and H&E staining was performed (Adapted from Wang et al. [16] and Rybka et al. [17] with permission). Bar graphs represent means ± SEM of % PA wall thickness. * denotes that the values are significantly different from each other at P < 0.05.
An animal model, in which SD rats are injected with SU5416 and exposed to hypoxia promoting severe PAH with pulmonary vascular lesions resembling those of humans [14], has become a gold standard to study PAH [15]. The experimental design often involves a single subcutaneous injection of SU5416, followed by subjecting the animals to chronic hypoxia for 3 weeks. Subsequently, the animals are kept in normoxia, and severe PAH and pulmonary vascular remodeling are progressively developed. We found that programmed cell death-inducing anti-cancer drugs reversed pulmonary vascular remodeling in this model of PAH as well. Figure 1C shows the results of our experiments, in which another proteasome inhibitor, carfilzomib (CFZ) injected 4 times over two weeks after the pulmonary vascular remodeling was developed effectively reduced the PA wall thickness in PAH rats [16]. Proteasome inhibition-dependent reversal of pulmonary vascular remodeling occurred through the reduction of both intimal and medial wall thickening, suggesting that both endothelial cells and smooth muscle cells (SMCs) can be affected by these anti-cancer drugs [13].
\nWhile anthracyclines such as DNR and proteasome inhibitors are effective inducers of apoptosis of PASMCs [11, 13, 16], these agents could exert other biologic actions. Thus, we tested the effects of a more ‘pure’ apoptosis inducer, navitoclax (ABT-263) that inhibits anti-apoptotic proteins Bcl-2 and Bcl-xL. We found that this drug also reversed PA remodeling in SD rats as well as in Fischer rats with PAH promoted by SU5416 + hypoxia (Figure 1D; [17]). The reversal of pulmonary vascular remodeling by navitoclax was also recently reported by van der Feen et al. [18] in a different experimental model of PAH in rats
\nThese results provided important information, in live experimental animals, showing that programmed cell death-inducing anti-cancer drugs are capable of reversing pulmonary vascular remodeling in multiple models of PH. While this knowledge established a basis for exploring whether causing the death of pulmonary vascular cells clinically benefits PAH patients, it also generated many questions that need to be addressed.
\nOne question is whether both the proliferative synthetic phenotype and the differentiated contractile phenotype of PASMCs are killed by these drugs. It is preferable that only abnormally grown cells are killed, as it is important to preserve contractile SMCs that are needed for the pulmonary circulatory system to function.
\nThe examination of PAs from rats treated with DNR by terminal deoxynucleotidyl transferase dUTP nick end labeling (TUNEL) staining, which detects apoptotic cells, demonstrated that only remodeled PAs of rats with PH exhibited apoptotic cells, but not healthy control rats (Figure 2A; [13]). Similar results were obtained in the analysis of cleaved caspase-3 as an indication of the occurrence of apoptotic cells by Western blotting. As shown in Figure 2B, PAs from rats treated with chronic hypoxia to promote PH and subsequently treated with DNR exhibited significantly higher levels of cleaved caspase-3 compared to healthy rats injected with DNR [13]. These results revealed that unwanted abnormally grown pulmonary vascular cells can preferentially be killed by this anti-cancer drug.
\nEffects of programmed cell death-inducing anti-cancer drugs on apoptosis. (A & B) SD rats were treated with chronic hypoxia for 2 weeks to produce pulmonary vascular thickening and injected with DNR. Rats were then placed back in the hypoxic environment. Three days after the injection, lungs were harvested and TUNEL staining and Western blotting with the cleaved caspase-3 antibody were performed to monitor apoptosis (Adapted from Ibrahim et al. [13] with permission). (C & D) SD rats were subjected to SU5416/hypoxia to promote PAH. After pulmonary vascular remodeling was developed, rats were injected with CFZ twice a week for 2 weeks. Lungs were harvested and TUNEL staining and Western blotting with the cleaved caspase-3 antibody were performed to monitor apoptosis (Adapted from Wang et al. [16] with permission). Bar graphs represent means ± SEM. * denotes that the values are significantly different from each other at P < 0.05.
Results shown in Figure 2C and D demonstrated that this increased susceptibility of pulmonary vascular cells in PH animals can also be seen with another anti-cancer drug. CFZ also caused the apoptosis in PAs of rats with PAH induced by SU5416/hypoxia, while no apoptosis signals were observed in control healthy rats treated with CFZ as monitored by TUNEL assay (Figure 2C) and Western blotting using the cleaved caspase-3 antibody (Figure 2D) [16].
\nWe hypothesized that anti-cancer drugs preferentially kill the proliferating phenotype of SMCs over differentiated SMCs. Our experiments using cultured PASMCs showed that only proliferating SMCs, but not differentiated SMCs, were killed by DNR [13]. Figure 3 shows similar experimental results when proliferating and differentiated human PASMCs were treated with genistein, a naturally occurring isoflavone. DePsipher Mitochondrial Potential assay (Trevigen, Gaithersburg, MD, USA) showed that green fluorescent apoptotic cells were only observed when proliferating PASMCs were treated with genistein, while differentiated PASMCs produced by using the Differentiation Medium (Cell Applications, Inc., San Diego, CA, USA) were resistant to be killed by the same concentration of genistein. These results demonstrate that proliferating PASMCs are more susceptible to undergo apoptosis compared to differentiated PASMCs, suggesting that apoptosis-inducing drugs eliminated unwanted proliferating PASMCs while preserving the contractile phenotypic cells with muscle functions.
\nEffects of genestein on proliferating and differentiated human PASMC apoptosis. Proliferating human PASMCs purchased from Cell Applications grown in Human SMC Growth Medium and differentiated PASMCs produced using the Human SMC Differentiation Medium were treated with genistein (50 μM). Apoptotic cells were identified by green fluorescence produced using the DePsipher Mitochondrial Potential assay.
One interesting observation we came across in relation to the mechanism of PASMC killing by anthracycline- and proteasome inhibitor-classes of anti-cancer drug is that, in addition, to apoptosis, another programmed cell death mechanism, namely autophagic cell death is also involved. We initially found that autophagy of the cells is increased in PAs of PH rats treated with DNR [13]. Similar results were observed in cultured proliferating human PASMCs when cells were treated with DNR. Further, DNR-induced cell killing was attenuated when an autophagy mediator, LC3B, was knocked down [13]. CFZ-induced cell killing was also found to involve autophagy, and we further identified the role of tumor protein p53-inducible nuclear protein 1 (TP53INP1) in this mechanism [16].
\nDrugs that promote programmed cell death are effective anti-cancer drugs, however, they also exert serious potentially life-threatening complications [19]. Cardiotoxicity is a major complication that accompanies the use of anti-cancer drugs especially anthracyclines. Since PAH patients already have the weakened heart, the use of these anti-cancer drugs would be considered to be contraindications. However, we found that the RV affected by PAH is remarkably resistant to drug-induced myocardial cell killing. As we characterized the RV of PAH rats injected with DNR to reverse PA remodeling as described above, we found that DNR administration to PAH rats did not influence the RV contractility or the RV structure [13]. This study also found that DNR did not promote apoptosis of cardiomyocytes in hypertrophied RV in rats with PH (Figure 4A; [13]). Similarly, CFZ that was found to effectively reverse PA remodeling did not cause apoptosis in the RV in SU5416/hypoxia model of PAH in rats (Figure 4B; [16]). These are highly significant findings revealing that the RV affected by PAH is resistant to DNR and CFZ, drugs that are known induce cardiotoxicity and cardiomyocyte killing in the normal heart, providing evidence that the clinical use of these anti-cancer drugs in PAH patients may not be contraindications.
\nEffects of programmed cell death-inducing anti-cancer drugs on the RV affected by PAH. (A) SD rats were treated with chronic hypoxia for 2 weeks to produce pulmonary vascular thickening and injected with DNR. Rats were then placed back in the hypoxic environment. Three days after the injection, RV tissues were harvested and Western blotting with the cleaved caspase-3 antibody was performed to monitor apoptosis (Adapted from Ibrahim et al. [13] with permission). (B) SD rats were subjected to SU5416/hypoxia to promote PAH. After pulmonary vascular remodeling was developed, rats were injected with CFZ twice a week for 2 weeks. RV tissues were harvested and Western blotting with the cleaved caspase-3 antibody were performed to monitor apoptosis (Adapted from Wang et al. [16] with permission). Bar graphs represent means ± SEM. All the values were not significantly different from each other at P < 0.05.
By contrast, bortezomib was found to promote apoptosis in both RV and left ventricle (LV) of rats with PH induced by monocrotaline [20]. Also, navitoclax (ABT-263; an inhibitor of anti-apoptotic proteins, Bcl-2 and Bcl-xL), not only caused apoptosis in the remodeled PA [17], but also promoted apoptosis in RV myocytes in PAH rats. Figure 5 shows the transmission electron microscopy images of normal SD rat RV myocytes (Figure 5A) and RV myocytes from PAH SD rats treated with navitoclax exhibiting signs of apoptosis (Figure 5B). The nuclei PAH rats treated with navitoclax underwent the fragmentation with dramatic changes in the nuclear chromatin with the segregated heterochromatin that distributed preferentially within the nuclear envelope as sharply defined clumped bodies (Figure 5B, red arrowheads). The quantification of apoptotic nuclei revealed that the most of RV myocytes in PAH rats became apoptotic when treated with navitoclax (Figure 5C).
\nNavitoclax promotes cardiomyocyte apoptosis in the RV affected by PAH. (A) The normal RV structure of RV cardiomyocytes as monitored by transmission electron microscopy. Magnification ×16,000. (B) SD rats were subjected to SU5416/hypoxia to promote PAH. After pulmonary vascular remodeling was developed, rats were injected with navitoclax twice a week for 2 weeks as described in Rybka et al. [17]. RV tissues were harvested and a transmission electron microscope was used to analyze the apoptotic nuclei. Bar graphs represent means ± SEM. * denotes that the values are significantly different from each other at P < 0.05. Transmission electron microscopy studies were performed as described in Shults et al. [32].
These results suggest that, while three classes of anti-cancer drugs have so far been found to be effective in reversing PA remodeling, hypertrophied RV myocytes are only resistant to DNR and CFZ, while Bcl-2/Bcl-xL inhibition seems target downstream of apoptotic pathway thus escapes from the resistance to cardiomyocyte killing. Whether the RV damaging effects of bortezomib in PAH rats [20] is specific to the model induced by monocrotaline that can exert non-specific pathophysiologic actions need further investigations, however, the data so far do not support the use of bortezomib in the PAH treatment. CFZ that is considered to be a safe alternative to bortezomib in cancer therapy [21] and is a more selective and irreversible inhibitor of the chymotrypsin-like activity of the 20S proteasome [22, 23] could be more promising.
\nOur laboratory previously found a cell-signaling pathway for the downregulation of Bcl-xL/Bcl-2 that results in the apoptosis of cardiomyocytes [24]. This pathway was found as a consequence of our laboratory cloning the promoter region of the GATA4 transcription factor that regulates gene transcription of Bcl-xL and Bcl-2. We found that CBF/NF-Y binding to the CCAAT box of the Gata4 promoter is inhibited by DNR through the activation of p53 in cardiomyocytes [24], but not in PASMCs [13]. Thus, we hypothesized that p53 inhibitors would protect the heart against cardiotoxicity induced by anti-cancer drugs without affecting the efficacy of these drugs to reverse PA remodeling.
\nIn our study of CFZ as described above, we found that this proteasome inhibitor is effective in reversing PA remodeling and that the RV affected by PAH is resistant to CFZ toxicity [16]. However, as expected from the earlier cancer studies, CFZ did cause the cardiomyocyte apoptosis in the LV of PAH rats (Figure 6A). As a support for our hypothesis, this CFZ-induced apoptosis of LV cardiomyocytes was inhibited by a p53 inhibitor, pifithrin-α in PAH rats (Figure 6A), while this cardioprotective agent did not interfere with CFZ reducing the PA wall thickening (Figure 6B). Interestingly, we found that a clinically used cardioprotective drug, dexrazoxane, also protected that LV of PAH rats from CFZ toxicity without affecting the reversal of PA remodeling. Further investigations are needed to determine whether these actions of dexrazoxane involve p53. Nevertheless, these results suggest including dexrazoxane or a p53 inhibitor to protect the LV against drug-induced damage while treating PAH patients with anti-cancer drugs.
\nDexrazoxane (DEX) and pifithrin-α (PFT-α) protects the LV from CFZ-induced apoptosis without affecting the efficacy of CFZ in reversing PA remodeling. (A) PAH rats (SU5416/hypoxia) were divided into 4 groups. DEX or PFT-α was injected intraperitoneally along with CFZ, twice a week for two weeks. Rats were then sacrificed 3 days after the last injection. LV tissues were homogenized, and subjected to Western blotting for the cleaved capase-3 formation. The bar graph represents means ± SEM. * denotes that the values are significantly different from each other at P < 0.05. (B) The reduction of remodeled PA thickness induced by CFZ was not affected by DEX or PFT-α by analyzing H&E staining. The bar graph represents means ± SEM. * denotes that the values are significantly different from the PAH value at P < 0.05. (Adapted from Wang et al. [16] with permission).
Since experiments described above provided results that support the use of anti-cancer drugs to reverse pulmonary vascular remodeling, we further searched for other drugs that could be useful. In an effort to find effective drugs that preferentially kill proliferating PASMCs, we screened various drugs [25]. We found that docetaxel (a taxane class of anti-cancer drugs that stabilizes and inhibits microtubules) effectively killed proliferating human PASMCs, but not differentiated human PASMCs in culture [25]. As we tested docetaxel for reversing pulmonary vascular remodeling in the SU5416/hypoxia model of PAH, we found that this drug indeed was effective in reducing thickened pulmonary vascular walls (Figure 7A). Effects were similar to anthracycline-, proteasome inhibitor-, and Bcl-2/Bcl-xLinhibitor-classes of drugs. As described above, we found that DNR and CFZ did not have adverse effects on the hypertrophied RV in PAH rats while Bcl-2/Bcl-xL inhibition resulted in the apoptosis of RV myocytes. Docetaxel also did not exhibit adverse effects on the hypertrophied RV in PAH rats. Moreover, this drug repaired damaged RV caused by PAH. In SU5416/hypoxia model of PAH, the RV was found to have significant cardiac fibrosis as shown in the blue stain of Masson’s trichrome staining in Figure 7B. Remarkably, these fibrotic lesions were eliminated by the treatment of PAH rats with docetaxel (Figure 7B; [25]).
\nDocetaxel reverses pulmonary vascular remodeling and cardiac fibrosis in the RV in PAH rats. SD rats were subjected to SU5416/hypoxia to promote PAH. After pulmonary vascular remodeling was developed, rats were injected with DTX twice a week for 2 weeks. (A) Lungs were harvested and H&E staining was performed. The bar graph represents means ± SEM of % PA wall thickness. * denotes that the values are significantly different from each other at P < 0.05. (B) Heart tissues were harvested and Masson’s trichrome staining was performed to monitor fibrosis. The bar graph represents means ± SEM of % fiborsis in the RV. * denotes that the values are significantly different from the PAH value at P < 0.05. (Adapted from Ibrahim et al. [13] with permission).
These results suggest that docetaxel is an effective drug that can reverse pulmonary vascular remodeling and at the same time it can also repair the damaged RV caused by PAH at least in SD rats treated with SU5416/hypoxia. Another taxane drug, paclitaxel has also been shown to attenuate pulmonary vascular remodeling in rodent models of PAH induced by monocrotaline or SU5416/hypoxia [26, 27, 28, 29, 30]. However, the ability of paclitaxel to repair the RV in PAH animals has not been reported. It is interesting to note that paclitaxel has been shown to improve cardiac function during ischemia in isolated rat and rabbit hearts [31], reinforcing the idea that taxanes have the capacity to promote cardiac repair.
\nWe tested the concept that cell death-inducing anti-cancer drugs may reduce the PA wall thickening using rat models of PAH. We found that: (1) The treatment of PAH rats with anthracycline-, proteasome inhibitor- or Bcl-2/Bcl-xL inhibitor-classes of drugs after pulmonary vascular remodeling had occurred resulted in the reversal of pulmonary vascular remodeling and opened up the lumen; (2) These effects were accompanied by the apoptosis of PA wall cells in PAH rats, but these drugs did not promote apoptosis in normal healthy rats, suggesting the anti-cancer drugs selectively kill remodeled vascular cells; (3) DNR, an anthracycline, and CFZ, a proteasome inhibitor, did not adversely affect the hypertrophied RV of PAH rats. (4) While the LV was damaged by CFZ, we identified cardioprotective agents (dexrazoxane and pifithrin-alpha) that can protect the heart against drug-induced cell death without affecting the efficacy of the drugs to reduce PA remodeling; (5) Docetaxel, a taxane class of anti-cancer drugs, not only reversed pulmonary vascular remodeling without exerting RV or LV toxicity, but also repaired the RV damaged caused by PAH. These findings from our laboratory as well as reports by other laboratories on the topic of the effects of programmed cell death-inducing anti-cancer drugs on remodeled PA and the RV affected by PAH in experimental animals are summarized in Table 1.
\n\n | Reduces remodeled PA | \nAffects remodeled RV | \n
---|---|---|
Daunorubicin, DNR (Anthracycline) | \nYes | \nNo effects | \n
Carfilzomib, CFZ (Proteasome inhibitor) | \nYes | \nNo effects | \n
Bortezomib (Proteasome inhibitor) | \nYes | \nApoptosis | \n
Navitoclax, ABT-263 (Bcl-2/Bcl-xL inhibitor) | \nYes | \nApoptosis | \n
Docetaxel, DTX (Taxane; Microtubule inhibitor) | \nYes | \nRepairs | \n
Paclitaxel (Taxane; Microtubule inhibitor) | \nYes | \nUnknown | \n
Abilities of various anti-cancer drugs to affect PA and RV remodeling.
These results demonstrate that certain anti-cancer drugs effectively and selectively cause programmed cell death of abnormally grown cells in the remodeled pulmonary vasculature without adversely affecting the RV in rat models of PAH. Thus, the inclusion of programmed cell death-induced anti-cancer drugs may be promising for treating PAH patients. Human clinical trials of PAH treatment that test the effectiveness of these anti-cancer drugs as mono-therapies or combination therapies along with cardioprotective agents described here as well as already available vasodilators are warranted.
\nThis work was supported in part by the NIH (grant numbers R01HL072844, R21AI142649, R03AG059554, and R03AA026516) to Y.J.S. The content is solely the responsibility of the authors and does not necessarily represent the official views of the NIH.
\nNone.
IntechOpen's Authorship Policy is based on ICMJE criteria for authorship. An Author, one must:
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