Phenolic compounds are vast, diverse, ubiquitous and widespread in nature. The biological significance of bioactive phenolic natural secondary metabolites is immense and of high and significant importance. Phenolic compounds are known to exhibit various biological activities such as antimicrobial, antioxidant and anti-inflammatory properties. This book chapter begins with classification of phenolic compounds in concise manner followed by going through their chemical properties that are essential for their biological activities. Some chemical properties such as acidity and formation of radicals are directly linked with their important and key biological activities such as antioxidant properties. The chapter covers methods and updated techniques of analysis of phenolic compounds. Finally, biosynthesis of such important organic molecules is covered going through some of their current synthesis methods in the laboratory, methods of their synthetic elaboration. Due to the high potential of phenolic compounds for applications in various industries such as pharmaceutical and food industries, the search for the development of efficient methods for their synthesis as well as modern and accurate methods for their detection and analysis will continue.
- Phenolic compounds
- chemistry of phenolic compounds
- biosynthesis of phenolic compounds
- classification of phenolic compounds
Phenolic compounds are a diverse class of bioactive secondary metabolites and are of high and significant importance. [1, 2, 3, 4, 5, 6, 7] They can be described as compounds that contain a phenol moiety. Phenol itself is a benzene ring that is substituted with a hydroxyl group (Figure 1). Thus, its systematic name is hydroxybenzene.
Phenolic compounds display a wide range of biological activities. For instance, they are known to exhibit antioxidants, antimicrobial, and anti-inflammatory properties. They are ubiquitous in nature. For instance, they are present in various types of fruits such as apple, banana, orange, mango, peach, papaya, strawberry, pomegranate, watermelon, and pineapple. For example, myricetin (a flavonol) is found in apple, gallic acid (a hydroxybenzoic acid) is found in banana, quercetin (a flavonol) and cyanidin (an anthocyanin) are found in pomegranate,
2.1 Simple phenolic compounds
Phenolic compounds that contain one phenol unit (or a derivative of it) are considered “simple”. Fundamentally, they are substituted phenol compounds. Simple phenolic compounds have C6 general skeleton representation. The general structure is shown below (Figure 2). The group denoted by “R” (an organic group which could be alkyl, alkenyl, aryl …etc. or hydroxy, alkoxy, amino …etc) which can be in the
Below are some simple phenolic compounds.
2.1.1 Simple phenolics
Simple substituted phenol compounds can be hydroxyphenols or dihydroxybenzenes. Examples are catechol (1,2-dihydroxybenzene), resorcinol (1,3-dihydroxybenzene), and hydroquinone (1,4-dihydroxybenzene) (Figure 3).
Other simple substituted phenol compounds can also be dihydroxyphenols or trihydroxybenzenes. Examples are pyrogallol (1,2,3-trihydroxybenzene), hydroxyquinol (1,2,4-trihydroxybenzene), and phloroglucinol (1,3,5-trihydroxybenzene) (Figure 4).
2.1.2 Phenolic acids
Phenols that contain a carboxylic acid are termed as phenolic acids. If the carboxylic acid functional group is directly bonded to the phenol ring, the phenolic compound is termed as hydroxybenzoic acid. When carboxylic acid functional group and the phenol ring are separated by two doubly bonded carbons (a C=C bond), phenolic compounds are termed as hydroxycinnamic acids.
184.108.40.206 Hydroxybenzoic acids
Hydroxybenzoic acids are benzoic acids substituted with a hydroxyl group. Alternatively, they can be viewed as phenols that are substituted with a carboxylic acid functional group that is directly bonded to the phenol ring (Figure 5).
The hydroxyl group in hydroxybenzoic acids can be
Dihdyroxybenzoic acids are benzoic acids that are substituted with two hydroxyl groups. The two hydroxyl groups can mainly be in 2,3-, 2,4-, 2,5-, 2,6-, 3,4-, and 3,5- relative positions (Figure 7).
Trihdyroxybenzoic acids are benzoic acids that are substituted with three hydroxyl groups. Examples include 2,4,6-trihydroxybenzoic acid and 3,4,5- trihydroxybenzoic acid (gallic acid) (Figure 8).
220.127.116.11 Hydroxycinnamic acids
When the carboxylic acid functional group is separated from the phenol ring by a C=C bond, phenolic acids are described as hydroxycinnamic acids (Figure 9).
Examples of hydroxycinnamic acids are 2-, 3-, and 4-hydroxycinnmaic acid shown below (Figure 10).
Other common examples of cinnmaic acids are caffeic acid, ferulic acid, and sinapic acids shown below (Figure 11).
Phenolic compounds that contain more than one phenol unit are considered “polyphenol”. Polyphenolic compounds have C15 general skeleton representation.
Flavonoids are polyphenolic compounds with the general structure shown below (Figure 14).
Generally, rings A and C are either mono, di, or trihydroxylated. The
Tannins are known to bind to and precipitate proteins and amino acids. They are subdivided into three types; hydrolyzable, condensed and complex. Hydrolyzable tannins can be gallotannins or ellagitannins. Gallotannins are polyols that are substituted with gallic acid units. The galloyl units in gallotannins are linked by depside (ester) linkages. Commonly the polyol core is a D-glucose that is substituted with gallic acid units. Tannic acid is an example of gallotannins (Figure 16).
Similar to gallotannins, ellagitannins are hydrolysable 1,2,3,4,6-pentagalloylglucose. However, unlike gallotannins characterized by depside linkages, adjacent galloyl groups in ellagitannins are linked by C-C bonds (Figure 17).
Condensed tannins (Figure 18) are polymeric phenolic compounds that consist of catechin units. When depolymerized, they give anthocyanidin. Thus condensed tannins are called proanthocyanidins.
Complex tannins are gallotannins or ellagitannins bonded to a catechin unit (Figure 19).
2.3 Others phenolic compounds
Stilbenes are phenolic compounds in which two phenol units are linked by two-doubly bonded carbons (Figure 18). Examples of stilbenes include resveratrol, pterostilbene and piceatannol shown (Figure 20).
Lignans consist of two phenol units linked by four carbons. Examples include matairesinol, secoisolariciresinol and pinoresinol (Figure 21).
Lignins consist of phenol units or phenolic compounds that are linked with each other by carbon chains (Figure 22). Lignins are high molecular weight polymers.
An important chemical feature of phenolic compounds is the acidity of the phenol moiety. The unequal shift of electrons in the O-H bond in phenol is caused by the difference in electronegativity between H and O. The arbitrary electronegativity values according to Pauling scale are 2.1 and 3.5 respectively. Thus the formed inductive effect imparts a positive partial charge on the H atom (Figure 23). Thus the H atom is removable in the form of a proton by a suitable base. The pKa of phenol is 9.9, relatively stronger as an acid than aliphatic alcohols (pKa ca. 16). 
The resultant conjugate base, the phenoxide ion, is further stabilized by resonance (Figure 24). The lone pair placed as a result of proton abstraction is delocalized over the phenyl ring. Electron delocalization by resonance results in stabilization of the phenoxide ion.
Substituents on the phenol ring can have a significant effect on the acidity of phenol (Figure 25). For instance, electron withdrawing groups (EWG) increase the acidity of phenol. EWG stabilize the phenoxide ion further by inductive and resonance effects. On the other hand, electron donating groups (EDG) decrease the acidity of phenol. EDG lower the stability of the phenoxide ion by donating of electrons by inductive or resonance effects.
For example, 4-nitrophenol with a pKa of around 7 is more acidic than phenol itself. The nitro group withdraws electrons by resonance and thus imparts an additional resonance stabilization of the phenoxide ion (Figure 26). Thus, 4-nitrophenoxide ion is more stable than the simple unsubstituted phenoxide ion.
For example, 4-aminophenol with a pKa of around 10.3, is less acidic than phenol itself. The nitro group imparts an additional resonance stabilization of the phenoxide ion which is then more stable than the simple unsubstituted phenoxide ion (Figure 27).
3.2 Hydrogen bonding
The inductive effect of the O-H bond in phenol induces a negative partial charge on O and a positive partial charge on H. Therefore, the hydrogen (H) atom can interact with heteroatoms possessing nonbonding electrons, such as O, N, F. This type of interaction is noncovalent and rather electrostatic and constitutes hydrogen-bonding (H-bonding).  The H atom of the O-H bond in phenol can form a H-bond with the O atom in another phenol molecule, constituting intramolecular H-boning (Figure 28). In addition, the H atom is also capable of interacting with heteroatoms in other molecules to form intermolecular H-bonding.
Phenolic compound with adjacent hydroxyl groups such as protocathechuic acid, can exhibit intramolecular H-bonding (Figure 29). Phenolic compounds with adjacent hydroxyl and alkoxy groups are also capable of intramolecular H-bonding.
Another structural possibility for intramolecular H-bonding is the presence of a hydroxyl group
Intramolecular H-bonding can result in formation of five-membered rings as in Ferulic acid (Figure 29) and six-membered rings as in Flavanone (Figure 30). Such rings are inherently stable which would consequently influence the chemistry of phenolic compounds. For instance, intramolecular H-bonding can lower the solubility and reactivity of phenolic compounds in esterification and etherification reactions.
3.3 Esterification reactions
Phenolic compounds can take part in esterification reactions. They can contribute the phenolic hydroxyl group upon reactions with a carboxylic acid or a carboxylic acid derivative such as acid anhydrides or acid halides typified by acid chlorides (Figure 31), forming phenolic esters.
The other esterification possibility of phenolic compounds is for them to contribute their carboxyl group upon reactions with alcohols to produce the corresponding phenolic ester (Figure 32).
3.4 Etherification reactions
Phenolic compounds can undergo etherification reactions. Thus they can react with alcohols to produce the corresponding phenolic ether (Figure 33).
Phenolic compounds can undergo oxidation reactions. Homolytic (symmetrical) oxidative O-H bond cleavage gives rise to a phenolic radical (Figure 34). Such radicals are stabilized by resonance by delocalization of the resultant single electron over the ring.
Phenolic compounds can be analyzed using various techniques. Mass spectrometry (MS), high performance liquid chromatography (HPLC), gas chromatography (GC), GC–MS, calorimetry, ultraviolet (UV), ultraviolet–visible (UV/VIS) spectrophotometry, and other spectrophotometric techniques represent examples of such techniques. [15, 16, 17, 18] Total phenolic content (TPC) of phenolic compounds in plants is commonly measured using spectrophotometry techniques such as Folin-Denis and Folin–Ciocalteu methods.  The latter method which is based on electron-transfer, was found to be more preferable and thus more common. [15, 16]. GC has been used to analyze phenolic acids, condensed tannins, flavones, and falvonoids. HPLC has been used to analyze anthocyanins, hydrolysable tannins, phenolic acids, cinnamic acids and favonoids.  Anthocyanins have been analyzed using UV absorption at a wavelength range of 489–550 nm.  Hydrolysable tannins have been also analyzed at a wavelength of 500–550 nm. . Based on their ability to bind proteins, tannins have been analyzed using protein-binding methods. [20, 21] Calrimetric methods have been used to determine the TPC in flavonoids and tannins. Other techniques for analysis of phenolic compounds include capillary electrophoresis (CE) and micellar electro-kinetic chromatography. 
Recent methods of analysis include ultra-high performance liquid chromatography (UHPLC) , ultra-high performance liquid chromatography-quadrupole-orbitrap (UHPLC-Q-Orbitrap) , high performance liquid chromatography coupled to tandem mass spectrometry (HPLC-MS/MS) , liquid chromatography coupled with electrospray- ionization triple quadrupole time- of- flight mass spectrometry (LC- ESI- QTOF- MS) and high- performance liquid chromatography- photo diode array (HPLC- PDA) , ESI-Ms/MS .
There are two general routes for the biosynthesis of phenolic compounds; shikimic acid pathway and the acetic acid pathway. [12, 28] In the shikimic acid pathway (Figure 35), hosphoenolpyruvate and erthrose-4-phosphate react in few steps to provide 3-dehydroquinate. Dehydration with shikimate dehydrogenase gives 3-dehydroshikimic acid. Reduction with NADPH gives shikimic acid. 3-Dehydroshikimic acid could lead to gallic acid in several steps. Shikimic acid is then converted into chorismic acid which undergoes Claisen rearrangement to afford prephenic acid. The product is then converted in several steps into tyrosine. The amino acid serves as a central point and a crucial precursor for the biosynthesis of various phenolic compounds (Figure 35).
Another route toward phenolic compounds, is the phenylpropanoid pathway (Figure 36). This route is essentially similar to the shikimic acid pathway until L-phenylalanine stage where the phenylpropanoid pathway takes form. L-Phenylalanine undergoes deamination catalyzed by phenylalanine ammonia lyase (PAL) enzyme to give cinnamic acid. Hydroxylation followed by conversion to the Coenzyme A provides
There have been many methods that are used to synthesize phenolic compounds in the laboratory. For instance, phenolic compounds were obtained using Copper-catalyzed synthesis from 1,3-dicarbonyl compounds employing dimethylsulfoxide (DMSO) as a methylene source (Figure 37). 
Carbohydrate-based polyphenolic compounds were synthesized from 1,5-anhydro-D-glucitol as schematically shown below (Figure 42).  Thus maplexin J (R1 = R2 = R3 = OH) and its derivatives were synthesized using this route.
Functionalization and expeditious transformation of phenol derivatives into new functional molecules have been made possible with metal-catalyzed C-H bond functionalization. [28, 29] The C-H activation science has allowed accessing new and further functionalized phenol derivatives in an expedient and efficient manner (Figure 44). Thus catalysts based on various transition metals such as Pd, Rh, Ru, Ir, Au and Fe have allowed functionalization of inert C-H bonds in simple phenolic compounds and subsequently their transformation into new functionalized molecules. [33, 34]
Recently, 1,3-dipolar cycloaddition (Click chemistry) of cellulose-based azides with alkynes derived from phenolic compounds were transformed into new phenolic compounds-based adducts (Figure 45). The new triazole products display some applicable anti UV properties. .
Simple phenolic compounds such as 4-aminophenol were transformed,
Natural phenolic compounds were transformed via ther alkyne-derivatives into the corresponding triazole adducts by the click reaction with aryl azides (Figure 47). The method demonstrates an example of synthetic elaboration of phenolic compounds into new ones of potential biological functions. .
6. Future perspective and industrial applications
Phenolic compounds possess a wide range of biological activities such as antioxidant, anti-inflammatory, and antimicrobial properties. Such properties allow phenolic compounds be able to reduce various illnesses and diseases such as cardiovascular diseases, diabetes, cancer, and hypertension. Therefore, they can be used in pharmaceutical industry as therapeutic agents. The antioxidant and antimicrobial properties enable phenolic compounds to function as food preservatives and additives. Thus they have also applications in food industry. In addition, phenolic compounds have applications in cosmetic and packaging industries. Exploitation of the full potential of phenolic compounds lies in the development of prudent and efficient methods for their detection, isolation, and analysis. Also, a key direction is their synthetic transformation and elaboration into new and potentially more biologically active molecules. Moreover, another prospect is the developments of new methods for the expeditious synthesis of phenolic compounds.
Phenolic compounds are ubiquitous in nature. Phenolic compounds display a wide range of biological activities such as antioxidant, antimicrobial and anti-inflammatory properties. Therefore, they have versatile applications in various industries such as pharmaceutical and food industries. Developments of efficient methods and protocols for the identification of phenolic compounds, their detection and analysis should continue. Due to their high potential and applications in various industries, development of efficient methods for their synthesis and synthetic elaborations into new phenolic compounds is sought. This chapter has been an attempt to provide the reader with a quick guide and reference for the classification, chemistry, analysis and synthesis of phenolic compounds.