Clinical effectiveness of IIV and A(H1N1)pdm09 influenza vaccine during pregnancy.
\r\n\tThe hope is that this book will include three main topics: threshold-based segmentation, clustering-based segmentation, and artificial neural networks based segmentation. But it is not limited to these topics in any specific way. This is a purely organizational division, seeking to present papers that describe the segmentation process through traditional, intermediate, and advanced approaches.
",isbn:"978-1-83881-906-4",printIsbn:"978-1-83881-113-6",pdfIsbn:"978-1-83881-907-1",doi:null,price:0,priceEur:0,priceUsd:0,slug:null,numberOfPages:0,isOpenForSubmission:!0,isSalesforceBook:!1,isNomenclature:!1,hash:"687a58dfbb2e544237cda3807153ff2c",bookSignature:"Dr. Paulo Eduardo Ambrosio",publishedDate:null,coverURL:"https://cdn.intechopen.com/books/images_new/11923.jpg",keywords:"Thresholding, Binarization, Threshold Determination, Thresholding Methods and Techniques, Clustering, Similarity, Segmentation by Regions, Clustering Methods and Techniques, Artificial Neural Networks, Deep Learning, Artificial Intelligence, AI Methods and Techniques",numberOfDownloads:null,numberOfWosCitations:0,numberOfCrossrefCitations:null,numberOfDimensionsCitations:null,numberOfTotalCitations:null,isAvailableForWebshopOrdering:!0,dateEndFirstStepPublish:"April 13th 2022",dateEndSecondStepPublish:"June 21st 2022",dateEndThirdStepPublish:"August 20th 2022",dateEndFourthStepPublish:"November 8th 2022",dateEndFifthStepPublish:"January 7th 2023",dateConfirmationOfParticipation:null,remainingDaysToSecondStep:"9 days",secondStepPassed:!0,areRegistrationsClosed:!1,currentStepOfPublishingProcess:3,editedByType:null,kuFlag:!1,biosketch:"Dr. Paulo E. Ambrósio is vice-director of the Center for Radiation Sciences and Technology (CPqCTR/UESC) and coordinates a Special Committee on Computing Applied to Health, Brazilian Computer Society. His research interests include applied computing, with an emphasis on health and biology, working mainly with pattern recognition, medical imaging, and computational modeling.",coeditorOneBiosketch:null,coeditorTwoBiosketch:null,coeditorThreeBiosketch:null,coeditorFourBiosketch:null,coeditorFiveBiosketch:null,editors:[{id:"256064",title:"Dr.",name:"Paulo",middleName:"Eduardo",surname:"Ambrosio",slug:"paulo-ambrosio",fullName:"Paulo Ambrosio",profilePictureURL:"https://mts.intechopen.com/storage/users/256064/images/system/256064.png",biography:"Paulo E. Ambrósio has a Ph.D. in Medical Sciences from the Medical School of Ribeirão Preto, University of São Paulo (FMRP/USP), Brazil. He is currently an associate professor in the Department of Exact and Technological Sciences, State University of Santa Cruz (UESC); vice-director of the Center for Radiation Sciences and Technology (CPqCTR/UESC); and coordinator of the Special Committee on Computing Applied to Health, Brazilian Computer Society. 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Each year, it is estimated that 5–10% of adults and 20–30% of children worldwide will become infected with influenza [1]. Pregnant women and infants are at particular risk for influenza. Influenza infection during pregnancy or during the first 6 months of life is a substantial cause of morbidity. Prevention of influenza in these populations is of global health importance.
\nPregnant women are considered a high-risk group for serious illness and complications from influenza. While annual influenza incidence rates in pregnant women are similar to those of nonpregnant women [2–4], influenza infection is associated with increased morbidity and mortality in this subpopulation, with pregnant women having an increased risk of influenza-attributed hospitalizations compared to nonpregnant women [4, 5]. Most likely this is associated with the interaction of the infection with the physiologic and immunologic changes that occur during pregnancy.
\nPregnancy-associated changes such as decreased lung capacity, reduced tidal volume, and increased cardiac output likely reduce the capacity of the respiratory and cardiac system to respond to the stress of influenza infection [2, 6]. In addition, during pregnancy there is a progressive suppression of cellular (T-cell mediated) immunity. While this immune suppression serves to protect the developing fetus from maternal cytotoxic T-cell immunity, it can impair the maternal response to viral infections such as influenza [7–11].
\nThe combination of these factors contributes to an increased risk of negative outcomes from influenza infection. If respiratory disease develops, especially during the later stages of pregnancy, it can lead to high morbidity among the pregnant women [6, 12–14]. In a study of hospital admissions records of women admitted between 1994 and 2000 with respiratory conditions during pregnancy, the hospitalization rate was 150/100,000, an admission rate considerably higher than that of nonpregnant women (17/100,000) and corresponding to the rate for people aged 65–69 [5]. Healthy pregnant women ages 20–34 were estimated to be 18 times more likely to be hospitalized for influenza than their nonpregnant peers [5].
\nWhile hospitalization rates are increased in all trimesters of pregnancy [4, 15, 16], they are the highest during the third trimester [5, 14, 16–18]. Likewise, there is a strong association of maternal morbidity with this trimester of pregnancy. In a 2003 study, Hartert et al. showed that cardiovascular hospitalization during influenza season increased with each trimester, nearly threefold higher by the third trimester compared to the first trimester [18]. In a study of 8323 healthy pregnant and postpartum women, Lindsay et al. found that the strength of association between influenza exposure and influenza-like illness (ILI) increased as the stage of pregnancy progressed, reporting an odds ratio (OR) of 1.12 (CI, 0.79–1.59) during the first trimester, 1.30 (CI, 0.97–1.73) during the second trimester, and 1.84 (CI, 1.31–2.59) for the third trimester [14]. Other studies have reported that by the third trimester, healthy pregnant women with no comorbidity have the same risk for ILI-associated hospitalization as nonpregnant women with chronic or comorbid conditions [4, 5].
\nPregnant women with comorbid conditions such as asthma, diabetes, heart disease, or chronic obstructive pulmonary disease are even more likely to be hospitalized than are pregnant women without chronic conditions [5, 14, 16–18]. Neuzil et al. reported event rates for influenza for low-risk women of 3, 6, and 10 per 10,000 women months in the first, second, and third trimesters, respectively. The event rate in nonpregnant women was 2 per 10,000 women months. Among women with chronic comorbid conditions, rates of 31, 16, and 21 per 10,000 women months were observed during these trimesters, respectively [4].
\nWhile considerable data demonstrate increased morbidity and hospitalization from seasonal influenza in pregnant women, mortality appears to be rare in healthy pregnant women during non-pandemic seasons [7, 19, 20]. A study of seasonal influenza among pregnant women over an 8-year period reported an average of five deaths per year and a mean mortality ratio of 2.9 per million live births [21]. However, during pandemics, influenza infection presents a significant increased risk of both morbidity and mortality in pregnant women.
\nFor example, during the pandemic of 1918, pneumonia was reported in 50% of previously healthy pregnant women, leading to case-fatality rates of over 50% [22–26]. In the 1957 pandemic, 50% of the women of childbearing age who died of influenza were pregnant. Furthermore, 10% of all influenza deaths during this pandemic occurred in pregnant women, with the majority occurring during the third trimester [23, 24].
\nIncreased rates of morbidity and mortality in pregnant women also were observed more recently during the 2009 influenza A(H1N1)pdm09 pandemic. In fact, the first reported death of an adult in the United States during this pandemic was a pregnant woman [27]. Of the 45 deaths reported early in the pandemic, 6 (13.3%) were pregnant women, all of whom developed viral pneumonia and respiratory distress syndrome [27–29].
\nA study of pregnant US women with confirmed or probable influenza during the first month of the outbreak reported 11/34 cases (32.4%) resulted in hospitalization—admissions rates four times higher than those in the general population [30]. Deaths were reported in all three trimesters and were independent of preexisting risk factors. In a California study, pregnant women who were hospitalized with or died from pH1N1 were less likely than nonpregnant women to have a predisposing or comorbid medical condition [31].
\nA review of published studies following the 2009 pandemic documented that pregnant women were disproportionately represented among hospitalizations, ICU admissions, and deaths. The 120 papers that were included in the review reported 3110 pregnant women from 29 countries with A(H1N1)pdm09 influenza infection, including 1625 (52.3%) who were hospitalized with 2009 H1N1, of whom 378 (23.3%) were admitted to an ICU and 130 (8%) died [32]. Pooling the data from all of the studies included in the review, the authors reported that pregnant women, who represent approximately 1% of the population of United States and Australia, accounted for 6.3% of hospitalizations, 5.9% of ICU admissions, and 5.7% of deaths [32].
\nUsing data from the Centers for Disease Control (CDC) and the Pregnancy Mortality Surveillance System, Callaghan et al. estimated the total burden of pregnancy-related mortality resulting from the 2009 to 2010 pandemic. Confirmed and possible deaths resulting from A(H1N1)pdm09 infection represented the leading cause of pregnancy-related mortality in the United States between the months of April 2009 and June 2010. Of 915 total pregnancy-related deaths during this period, 12% of pregnancy-related deaths were attributed to influenza, 75 (8.2%) classified as confirmed influenza A(H1N1)pdm09 deaths, and 34 (3.7%) classified as possible influenza infection deaths [33]. The authors calculated the pregnancy-related morality ratio for confirmed and possible influenza deaths at 2.2 per 100,000 live births. This represents a significant burden of mortality. The number of deaths (109) during the 2009–2010 influenza season was 20 times greater than the mean number (5) of annual possible influenza deaths reported in a 1998–2005 cohort of pregnancy-related deaths in non-pandemic years [33].
\nInfants born to influenza-infected women during the pandemic also experienced increased risks of poor clinical outcomes, mostly due to preterm birth. Reports of preterm birth rates ranged from 15 to 30% among infected women [32, 34–36]. Infection with A(H1N1)pdm09 was associated with increased risk of cesarean delivery [32]. In most cases, cesarean delivery was an attempt to improve worsening maternal status rather than out of concern for the infant [32]. Siston et al. reported a cesarean delivery rate of 58% in pregnant women with 2009 H1N1 compared to a baseline cesarean rate of 30.5% [32, 34, 37]. While cesarean deliveries were commonly described, it is likely that this rate was over-reported, since many of the studies reported only severely affected women. Many deliveries were emergencies and performed outside of controlled operating room settings, indicating the urgent nature of these deliveries and the critical status of the women [32].
\nWhile there is no clear consensus on transplacental transmission of influenza virus or direct viral effects on the fetus [2], the spread of virus beyond the respiratory tract during acute infection is unusual, and vertical transmission, although documented [38–40], appears to be rare [41, 42]. However, even in the absence of vertical transmission, adverse fetal effects can occur, most likely due to the systemic maternal immune response to the infection [43, 44]. Studies have documented inflammatory responses in fetal tissues in response to influenza infection. Such responses could impact the maternal-fetal interface, the placenta, or the fetus directly, leading to pregnancy loss [43]. In addition to direct damage from inflammatory responses, it is hypothesized that maternal hyperthermia can result in adverse fetal outcomes [28, 45]. Maternal hyperthermia during the first trimester of pregnancy, regardless of the cause, has been associated with an increased risk for neural tube defects [46], while fever during labor has been associated with adverse outcomes including neonatal seizures, cerebral palsy, encephalopathy, and death [2, 47–50].
\nIn a large population-based study of influenza infection in over 100,000 women, Hansen et al. observed an increased risk for fetal abnormalities (e.g., central nervous system malfunctions in the fetus, chromosomal abnormalities, suspected damage to the fetus from viral disease) was present in both seasonal (OR 1.53, CI, 1.19–1.95) and pandemic infections (OR 1.48, CI, 1.27–1.73) [51].
\nA review and meta-analysis of 33 studies published from 1953 to 2013 of first-trimester influenza exposure found that influenza exposure during the first trimester of pregnancy was associated with an increase in congenital abnormalities [adjusted odds ratio (AOR) 2.00, CI, 1.62–4.28]. Anomalies included neural tube defects [odds ratio (OR) 3.33, CI, 2.05–5.40], hydrocephaly (OR 5.74, 1.10–30.00), congenital heart defects (OR 1.56, 1.13–2.14), cleft lip (OR 3.12, CI, 2.20–4.42), digestive system anomalies (OR 1.72, CI, 1.09–2.68), and limb reduction defects (OR 2.03, CI, 1.27–3.27) [52]. A major limitation of this study concerns the fact that it defined influenza exposure as any reported influenza, influenza-like illness, or fever with or without clinical confirmation. The inclusion of wide clinical symptoms without laboratory confirmation of influenza likely resulted in overestimation of the number of infants exposed to influenza during gestation. It therefore cannot be determined whether congenital abnormalities were associated with general, all cause hyperthermia or whether influenza infection poses a unique and specific risk for these outcomes. Nonetheless, these observations suggest that prevention of influenza during the first trimester of pregnancy may reduce risk for congenital abnormalities.
\nFetal demise is associated with influenza infection as well. Women with influenza, especially those with pneumonia, had high rates of spontaneous abortion and preterm birth, with 52% of pregnancies ending in spontaneous abortion or preterm delivery during the 1918 pandemic [22, 23, 25].
\nUsing a large nationwide registry, Haberg et al. examined the risk of fetal death after maternal exposure to pandemic influenza infection. The researchers found that pregnant women with a clinical diagnosis of influenza had a nearly twofold increase in the risk of fetal death (adjusted hazard ratio, 1.91; 95% CI, 1.07–3.41) as compared to women who were not exposed to influenza [53].
\nPierce et al. assessed perinatal outcomes of maternal A(H1N1)pdm09 infection. The authors found that perinatal mortality was higher in infants born to infected women than in infants of uninfected women (39 per 1000 live births versus 7 per 1000 total births, respectively,
Infants younger than 6 months of age are at a heightened risk for serious illness from influenza, exhibiting the highest rates of severe influenza compared to other pediatric populations [41]. This age group has higher rates of hospitalization, more prolonged ICU stays, and higher fatality rates (0.33 per 100,000 children) than almost any other age group [55–59]. In the United States, estimates of hospitalization rates for young infants (less than 6 months of age) range between 1.8 and 7.2 per 1000 infants, higher than reported rates of hospitalization for children up to 4 years of age (0.14 per 1000) [60] and people 65–80 years of age (0.56–2.13 per 1000) [60–63]. Childhood deaths associated with influenza are most frequent in infants during the first months of life, with mortality rates in infants 0–6 months old more than four times higher than those in older children [59].
\nLibster et al. [64] documented particularly high mortality rates for infants during the 2009 H1N1 pandemic in Argentina. Of 251 infants and children hospitalized with confirmed A(H1N1)pdm09 infection, 13 (5%) died, for an overall death rate of 1.1 per 100,000 children. Infants were at particularly high risk for fatality, representing the highest death rate at 7.6 per 100,000 children. By comparison, this death rate was 10 times the reported US infant death rate during the relatively serious seasonal influenza season of 2003–2004 [59, 64].
\nTaken together, these observations highlight the impact of influenza on infants, especially the youngest, and underscore the need for prevention in this vulnerable population.
\nA large body of evidence collected over several decades demonstrates that pregnant women and young infants are at increased risk for complications from influenza, making control of influenza infection in these populations an important public health challenge. Influenza vaccines have been used since 1945 and currently are the primary strategy for preventing influenza infection [65].
\nDue to the frequent changes of the influenza viral antigens, a vaccine is formatted during the end of the previous season to include the specific antigens of the influenza strains expected to circulate in the following season, with a goal of conferring protection against the upcoming season’s strains. Each year, the trivalent inactivated influenza vaccines (IIV3) are formulated to contain three viral components: two influenza A subtypes and one influenza B virus. In 2012, the US Food and Drug Administration (FDA) approved the use of a quadrivalent influenza vaccine (IIV4). The quadrivalent vaccine contains two influenza A subtypes and two influenza B subtypes. In 2009, a monovalent H1N1 vaccine was prepared because the newly recognized strain was identified too late in the season to be included in the trivalent seasonal vaccines [66].
\nThe current inactivated influenza vaccines (IIVs) are composed of inactivated (killed) virus that has been chemically disrupted and purified to form a split-inactivated virus preparation. Such split-virus vaccines contain purified HA and NA antigens and have fewer side effects and reactions than inactivated whole virus vaccines. The IIVs currently available in the United States are split virus or subunit virus similar to the split virus [66].
\nThe other vaccine available in the United States is a live, attenuated influenza vaccine (LAIV). This vaccine is composed of live, attenuated, cold-adapted, temperature-sensitive virus administered directly into the nasal passage. The type A and B strains of influenza in this vaccine can replicate in the nasal passages, stimulating an immune response, but cannot replicate in the lower respiratory tract [67]. While LAIV has been licensed in the United States since 2003, it is not recommended for use in pregnant women [68].
\nA strategy to increase the effectiveness of IIVs is the addition of adjuvants. Adjuvants are compounds that stimulate the immune system to mount a more robust and protective response to the vaccine. The most commonly used adjuvants in influenza vaccines are the oil-based compounds AS03 and MF59. Adjuvants can allow for the use of lower doses of antigen, resulting in more available doses of vaccine, which may be useful in times of high demand such as during pandemics. While adjuvanted vaccines are not approved for use in pregnant women in the United States, in Canada, and in many European countries, the pandemic vaccine was formulated with adjuvant and administered to pregnant women [69].
\nVaccination of pregnant women with IIV has taken place since the 1960s. Universal recommendation for vaccinating woman at all stages of pregnancy has been recommended by the CDC’s Advisory Committee on Immunization Practices (ACIP) since 2004 [65, 70, 71] and by the World Health Organization (WHO) since 2005 [1]. The Advisory Committee on Immunization Practices does not preferentially recommend a specific formulation—trivalent or quadrivalent—of the influenza vaccine [72]. In response to the 2009 H1N1 pandemic, the WHO placed pregnant women, along with caregivers of infants younger than 6 months old, healthcare and emergency services personnel, individuals between 6 months and 24 years, and those aged 25 years or older with chronic medical conditions, in the highest priority group to receive vaccines [73].
\nThe American College of Obstetrics and Gynecology (ACOG) considers prevention of influenza to be an “essential element of prenatal care” [74]. In full support of the ACIP recommendations, ACOG issued new guidelines in September of 2010 stating that all unvaccinated pregnant women at any gestational age be vaccinated against influenza [74].
\nIt is well documented that the antibody (Ab) response to influenza vaccine in pregnant women is similar to that of age-matched, nonpregnant women [75–79]. These observations support a conclusion that influenza vaccination will lead to an effective immune response in pregnant women and thereby provide an important tool in prevention of influenza in this population.
\nPregnant women and neonates are high-risk groups for complications from influenza infection. Control of influenza in this population is an important public health concern. However, due in part to ethical concerns related to enrolling pregnant women in clinical studies, experimental data on influenza vaccination during pregnancy has been scarce, and the quality of the evidence is not consistently high overall [80].
\nPrior to 2010, there were few well-designed studies specifically addressing vaccine effectiveness in pregnant women. From 1964 to 2008, four studies specifically addressed vaccine effectiveness in pregnant women (Table 1). These studies covered eight different influenza seasons and included 51,547 pregnant women.
\n\nDuring a 1962–1963 outbreak of Asian influenza, Hulka measured vaccine effectiveness in pregnant women by asking immunized and nonimmunized patients if they had experienced influenza symptoms during the influenza season. While fewer immunized than unimmunized patients reported respiratory illness with fever (11% versus 20%, respectively), there was no significant difference in reports of respiratory illness between these patients [76].
\nBlack et al. assessed vaccine effectiveness in almost 50,000 pregnant women across five influenza seasons. Vaccine effectiveness was determined by the number of outpatient visits for ILI or hospitalization for influenza or pneumonia. Using these outcomes, the risk of medical visit for respiratory symptoms was no different between vaccinated and unvaccinated women, and hospitalization was rare in both groups [81]. Using the adjusted hazard ratios (AHR = 1.151; CI, 0.979–1.352) from this study, Skowronski and De Serres calculated a vaccine effectiveness of −15% (CI, −35 to 2%) for this study population [7].
\nIn a retrospective case-control study of five influenza seasons (1995–2003), Munoz et al. estimated the potential protective effect of vaccination by recording the occurrence of acute respiratory infection (ARI) in vaccinated and unvaccinated women. The researchers reported a nonsignificant (
Study | \nStudy period | \nParticipants | \nOutcomes measured | \nInfluenza vaccine protection | \n
---|---|---|---|---|
Hulka [76] | \n1962–1963 | \n544 pregnant women -363 immunized -181 nonimmunized 176 nonpregnant women -138 immunized -38 nonimmunized | \nIncidence of influenza-like illness (ILI) | \nNonsignificant reduction in incidence of ILI (20% versus 11%) | \n
Black et al. [81] | \n1997–2002 | \n49,585 pregnant women -3707 immunized -45,878 nonimmunized | \nMedical visit for respiratory symptoms | \nNo difference in medical visits ( Adjusted hazard ratio = 1.151; (CI, 0.979–1.352) Clinical effectiveness: −15% Excluding medical visits for asthma, no difference ( Adjusted hazard ratio = 1.001 (CI, 0.838–1.196) Clinical effectiveness: 0% | \n
Munoz et al. [117] | \n1998–2003 | \nPregnant women -252 immunized -826 nonimmunized | \nMedically attended acute respiratory illness (ARI) | \nNonsignificant trend toward lower incidence of ARI (22.6% versus 18.9%; Clinical effectiveness: −20% (CI, −59.5 to 9%) any time during pregnancy 39% (CI, −56 to 76%) during peak of influenza season | \n
Zaman et al. [79] | \n2004–2005 | \n340 pregnant women -172 immunized with TIV -168 immunized with pneumococcal vaccine | \nRespiratory illness with fever | \nSignificant reduction of respiratory illness with any fever: Risk difference: −14.2 (CI, −25.5 to 2.9) Clinical effectiveness: 35.8% (CI, 3.7–57.2%) Reduction in respiratory disease with fever over 38 °C: Risk difference: −7.3% (CI, −14.5 to 0.1%) Clinical effectiveness: 43.1% (CI, −9.0 to 70.3%) | \n
Madhi et al. [83] | \n2011–2012 | \n2116 pregnant women -1062 immunized with IIV3 -1054 received placebo | \nRT-PCR- confirmed influenza | \nClinical effectiveness: 50.4% (CI, 14.5–71.2%) | \n
Thompson et al. [84] | \n2010–2012 | \nPregnant women -100 with confirmed influenza -192 with ARI negative for influenza -200 control negative for influenza | \nRT-PCR- confirmed influenza | \nClinical effectiveness: 44% (CI, 5–67%) compared to influenza-negative controls 53% (CI, 24–72%) compared to ARI-negative controls | \n
Richards et al. [101] | \n2009–2010 | \n1125 vaccinated 1581 non-vaccinated (unadjuvanted vaccine) | \nRT-PCR or medical visit during pregnancy with influenza-related ICD-9 diagnosis code | \nClinical effectiveness: 61.5% (CI, 15.5–82.5%) | \n
Haberg et al. [53] | \n2009–2010 | \n117,347 pregnant women (adjuvanted vaccine) | \n\n | Clinical effectiveness: 70% (AHR, 0.30; (CI), 0.25–0.34) | \n
Clinical effectiveness of IIV and A(H1N1)pdm09 influenza vaccine during pregnancy.
The authors of this study speculate that while the receipt of an influenza vaccine may not prevent infection, it is likely to reduce the severity of the disease. However, they provided no data on clinical severity or evidence of such an association with vaccination status. Since there was no confirmation of influenza infection in most patients with ARI, it is impossible to confirm whether clinical symptoms were associated with influenza infection or with other respiratory viruses.
\nIn 2008, Zaman et al. published the first randomized, double-blind, controlled clinical trial (RCT) of influenza vaccine in pregnant women. In this study, 340 pregnant women were randomized to receive either trivalent influenza vaccine (IIV3) or pneumococcal polysaccharide vaccine during the third trimester of pregnancy. This study was part of The Mother’s Gift project, a randomized trial with the primary goal of assessing the safety and immunogenicity of pneumococcal vaccines. Therefore, the control arm consisted of mothers who received the pneumococcal vaccine, providing a control for an active, non-influenza vaccine. The authors measured nonspecific respiratory illness with fever and found that vaccinated women were significantly less likely to have respiratory illness, reporting a clinical effectiveness of 35.8% (CI, 3.7–57.2%) for respiratory illness with any fever and 43.1% for fever over 38 °C (CI, −9.0 to 70.3%) [79].
\nAll of these studies share the common weakness that they use clinical symptoms, and not laboratory-confirmed influenza, as the primary outcome. Influenza vaccines are specifically targeted to influenza viruses. Many other respiratory pathogens can cause symptoms similar to influenza, but influenza vaccines are not designed to prevent other causes of influenza-like illness. Hence, clinical symptoms without laboratory confirmation are nonspecific outcomes. Interpretation and quantification of true vaccine effectiveness using only clinical outcomes are problematic, potentially leading to inaccurate estimates of effectiveness. For this reason, laboratory confirmation, either by reverse transcription polymerase chain reaction (RT-PCR) or viral culture, remains the best diagnostic tool for confirming influenza and evaluating vaccine efficacy (VE) and effectiveness.
\nIn 2014, two studies began to address this deficiency in the literature. The research teams estimated influenza vaccine effectiveness in preventing illness among pregnant women using laboratory-confirmed (RT-PCR) influenza as the primary outcome.
\nMadhi et al. examined maternal and fetal outcomes in 2116 HIV-negative South African women during the 2011–2012 influenza season. 1062 women who received IIV3 were compared to women who received a placebo. Overall vaccine effectiveness at preventing laboratory-confirmed (RT-PCR) influenza in this population was 50.4% (CI, 14.5–71.2) [83].
\nUsing a large health plan database, the Pregnancy and Influenza Project evaluated seasonal vaccine efficacy during the 2010–2011 and 2011–2012 influenza seasons. The authors compared the proportion of vaccinated women among 100 RT-PCR-confirmed influenza cases with the proportion vaccinated among 192 women with ARI who tested negative for influenza, and 200 controls matched by season, site, and trimester [84]. The adjusted vaccine efficacy against influenza was of 44% (CI, 5–67%) using the influenza-negative controls and 53% (CI, 24–72%) for the ARI-negative controls [84].
\nThe 2009 A(H1N1) pandemic provided an opportunity to improve understanding of influenza vaccination during pregnancy. The pandemic allowed an evaluation of the effectiveness of maternal vaccination during an influenza season in which there was a high rate of viral circulation, as well as a close match between the vaccine strain and the circulating viral strain. Pregnant women were prioritized to receive the vaccine and were strongly advised to be vaccinated [85], resulting in higher than usual vaccination rates [86].
\nSince the 2009 pandemic, a number of studies have examined monovalent pandemic A(H1N1) vaccination of pregnant women. Synthesizing evidence from this new and expanding database should increase our understanding of maternal influenza vaccination. While most of these studies measured either seroconversion and hemagglutinin inhibition (HAI) titers [87–92] or safety and/or birth outcomes [93–100], two studies specifically examined clinical efficacy of pandemic A(H1N1) vaccine during pregnancy.
\nIn a retrospective cohort study, Richards et al. evaluated influenza infection in 1125 vaccinated and 1581 non-vaccinated women. In this study, influenza infection was defined as testing positive for influenza by RT-PCR or having a medical visit during pregnancy with influenza-related
A separate population-based study of 117,347 pregnant women in Norway estimated that vaccination during the second or third trimester of pregnancy resulted in a 70% reduction in influenza diagnosis following vaccination with adjuvanted A(H1N1) vaccine (adjusted hazard ratio, 0.30; CI, 0.25–0.34) [53].
\nWhile there is significant heterogeneity among these eight clinical studies, presenting wide-ranging estimates of vaccine effectiveness in pregnant women (from −15 to 70%), the evidence of effectiveness data based on laboratory-confirmed influenza is mounting and compelling. The cumulative evidence to date provides three studies showing significant clinical effectiveness during seasonal influenza years, 35.8% against respiratory disease in a RCT [79], 50.4% protection against laboratory-confirmed influenza in a RCT [83], and one large data-base study documenting VE of 44–53% [84]. Two studies of vaccine effectiveness during the 2009 A(H1N1) pandemic estimated VE of 61.5% (unadjuvanted) and 70% (adjuvanted), suggesting that vaccination during a pandemic season may offer more benefit than during non-pandemic years.
\nThese more recent estimates using laboratory-confirmed endpoints are well within the reported vaccine effectiveness for healthy, nonpregnant adults. When combined with the well-documented observation that the antibody response to influenza vaccine in pregnant women is similar to that of nonpregnant women, all current evidence suggests that efficacy of influenza vaccines in pregnant women is similar to the nonpregnant population.
\nAn important secondary benefit of maternal vaccination appears to be protection of infants from influenza infection during the first months of life, providing an important two-for-one benefit since no influenza vaccine is licensed or recommended for infants younger than 6 months of age.
\nMaternal vaccination has potential to protect newborns due to the transfer of maternal immunity. Transplacental transfer of antibodies occurs throughout pregnancy, with highest levels during the last 4–6 weeks of gestation [102, 103]. Antibodies (specifically IgG) cross the placenta from mother to fetus during the final weeks of pregnancy, while infants acquire additional immune protection during breastfeeding, when the main class of immunoglobulin transferred in breast milk is IgA [104].
\nSeveral studies have demonstrated transplacentally acquired antibodies after natural influenza infection in the mother. One study examined the cord sera of 26 infants who had culture-confirmed influenza when younger than 4 months of age. The authors found a direct correlation between the gestational age at the time of infection and the level of antibody in the cord serum (
During the 1979 influenza epidemic, infants of mothers with serum antibody to influenza (seropositive) were compared to infants of mothers who were seronegative [106]. The infants of seropositive mothers had higher specific serum antibody (IgG) titers against the HA influenza protein than did infants of seronegative mothers. Good correlation was found between maternal antibody titers and titers in infants (correlation, 0.81). No such correlation was found for non-immune mothers and their infants (correlation, 0.24) [106]. However, this study showed no difference in incidence of influenza infection, although infants of immune mothers showed delayed onset of symptoms and shorter duration of illness, suggesting that passive maternal immunization may delay onset and severity.
\nWhen evaluating vaccination response to influenza, a serum antibody titer of ≥1:40 against the HA protein is considered to be clinically relevant, resulting in a 50% decrease in symptomatic infection and, therefore, serving as a correlate of protective immunity [107]. Recent analysis of published data indicates an even higher level of clinical protection, estimating that 70% of participants are protected at a titer of 1:40, with protection increasing gradually with higher titers [108].
\nIn the absence of a widely accepted immune correlate of protection for influenza, the analysis of hemagglutinin inhibition (HAI) seroprotection rates is generally considered a useful indicator of protection in vaccinated persons. There are challenges associated with using this antibody titer as a correlate of protection in infants, however, particularly since this correlate was determined in healthy adults [41, 107]. In any event, the US Food and Drug Administration (FDA) uses this HAI antibody titer in evaluation of influenza vaccines, making the HAI antibody titer the standard used by most investigators [40], including those examining vaccine protection in neonates.
\nIn a study examining transplacental transfer of antibody in response to vaccination, Englund et al. studied women during the last trimester of pregnancy who were vaccinated with IIV3 (A/Sichuan/H3N2, A/Taiwan/H1N1, B/Victoria). Maternal immunization resulted in the transfer of influenza-specific IgG to the infants. When measured at the time of delivery, the levels of antibody transferred were high, with between 87 and 99% of antibody detectable in the mother also detectable in the infant [78]. The antibody titers to at least two of the three influenza antigens (influenza H3N2 and influenza B) remained significantly elevated up to 2 months of age [78].
\nSumaya and Gibbs vaccinated pregnant women and reported a similar correlation, finding that cord blood HAI antibody in infants correlated with titers of vaccine-stimulated HAI antibody in mothers, with HAI antibody detected in 54% of newborn serum and 73% of maternal serum [75]. This study did not examine infant influenza infection as an outcome, so the study was unable to correlate serum antibody levels with clinical outcome.
\nWhile these previous studies demonstrated that maternal antibody appears to be transferred to infants following both natural infection and vaccination, neither study discussed whether the level maternal antibody was high enough to confer protective immunity to the infant [41, 107]. Using HAI titer as a correlate of immunity, Steinhoff et al. did conduct an RCT of maternal influenza vaccine. Serum samples were obtained from 311 mothers before vaccination and at delivery and from 292 infants at birth at 10 weeks and 20–26 weeks later [109]. The proportion of mothers with a protective antibody titer (HAI ≥ 1:40) at the time of delivery was 88% for A/New Caledonia (H1N1), 98% for A/Fujian (H3N2), and 45% for B/Hong Kong. Similar proportions of infants had protective antibody titers at birth [109].
\nYamaguchi et al. also examined the immune responses to influenza vaccination during pregnancy by measuring the effect of influenza vaccination (IIV3) in pregnancy, including maintenance of the specific antibody response, and the efficiency of transplacental transfer of the antibody to the fetus. The study included 125 pregnant women, 71 in their second trimester and 54 during the third trimester of pregnancy. The authors reported that vaccination at any time during pregnancy yielded protective levels of antibody in both maternal and fetal blood [110].
\nIn a prospective study examining the immunogenicity and transplacental transmission of antibodies in pregnant women in Asia, Lin et al. enrolled 46 pregnant women who received a single dose of IIV3. Twenty-eight days after vaccination, the seroprotection rate in vaccinated women against H1N1, H3N2, and influenza B was 91.3, 84.8, and 56.5%, respectively [111].
\nSeveral additional studies have demonstrated transplacental antibody transfer following maternal vaccination with pandemic H1N1 vaccine. Three studies evaluated adjuvanted A(H1N1) vaccines, and two studied nonadjuvanted A(H1N1)vaccine. All five of the studies documented protective levels of antibody in significant percent of infants (79–95%).
\nZuccotti et al. followed 69 mother-infant pairs. The women were vaccinated during their third trimester of pregnancy with MF59-adjuvanted influenza A(H1N1) vaccine. All of the mothers had HAI antibody titers at or above 1:40 at the time of delivery and throughout the 5 months of follow-up. Ninety-five percent of the infants had HAI antibody titers at or about 1:40 at both birth and 2 months of age. By 5 months of age, the proportion of infants with titers of 1:40 dropped to 81.2% [89], suggesting that passively acquired antibody at levels thought to be protective is transferred and persists for at least 5 months.
\nIn a separate study performed at three sites in the UK, researchers followed infants born to mothers who were vaccinated with AS03-adjuvanted H1N1 vaccine during the second or third trimester of pregnancy. This study found that 79% of the infants of vaccinated mothers had serum antibody titers at or higher than 1:40 compared to a background immunity in 19% of infants of unvaccinated women (
Helmig et al. evaluated the serological response of a cohort of women immunized with adjuvanted A(H1N1) vaccine or by natural infection with A(H1N1)pdm09. The authors detected protective antibody levels (>1:40) in a significant number 17/19 (89.5%) of newborns born to vaccinated mothers (
In a study of nonadjuvanted A(H1N1) vaccine, Tsatsaris et al. measured Ab titers in cord blood of 88 infants born to women vaccinated with a single dose of monovalent A(H1N1) vaccine. The researchers reported 95% (CI, 89–99%) of infants have protective levels of antibody (>1:40) at birth [114], and Fisher et al. also reported protective levels of Ab in cord blood of infants following maternal vaccination with 2009 monovalent A(H1N1) [115].
\nTaken together, these studies provide an important proof of concept for transplacentally acquired antibody, from either natural infection or vaccination of their mother, to potentially protect young infants from influenza infection and present maternal immunization as a promising strategy for reducing influenza infection in infants.
\nOver the past 11 years, nine studies have been published evaluating the effect of maternal immunization on influenza in 97,656 infants across 15 influenza seasons. Six of these studies showed clinical protection; three studies did not (Table 2).
\nStudy | \nStudy period | \nParticipants | \nOutcomes measured | \nProtection by maternal influenza vaccine | \n
---|---|---|---|---|
Black et al. [81] | \n1997–2002 | \n49,585 pregnant women | \nHospitalization for pneumonia and influenza | \nNo difference in risk for hospitalization ( Adjusted hazard ratio: 0.956 (CI, 0.889–1.029) Clinical effectiveness: 4% (CI, –3 to 11%) No difference in risk including otitis media visit ( Adjusted hazard ratio: 0.938 (CI, 0.777–1.132) Clinical effectiveness: 6% (CI, –13 to 22%) | \n
Munoz et al. [117] | \n1998–2003 | \n225 infants of immunized mothers 826 infants of nonimmunized mothers | \nHospitalization or clinic visits for respiratory conditions | \nNo difference in hospitalization During first month, infants of immunized moms had more clinic visits for bronchitis ( No other differences | \n
France et al. [116] | \n1995–2001 | \n3160 infants of immunized mothers 37,969 infants of nonimmunized women | \nMedically attended acute respiratory illness (ARI) | \nNo reduction in clinic visit rates Incident rate ratio: 0.96 (CI, 0.86–1.07) | \n
Zaman et al. [79] | \n2004–2005 | \n316 infant-mother pairs followed for 24 weeks | \nClinic visits for respiratory illness Laboratory-confirmed influenza before 24 weeks of age (confirmation by rapid test) | \n63% effective at preventing laboratory-confirmed influenza in infants up to 6 months old (CI, 5–85%) 29% effective in preventing febrile illness (CI, 6.9–45.7%) 42% effective in preventing clinic visit (CI, 18.2–58.8%) | \n
Benowitz et al. [118] | \n2000–2009 | \nInfants less than 12 months old -220 cases -430 matched controls | \nLaboratory-confirmed influenza (confirmation by direct fluorescent antibody (DFA) test) | \n91.5% effective at preventing hospitalization of infants less than 6 months of age ( No significant effect on infants older than 6 months | \n
Eick et al. [120] | \n2002–2005 | \n1169 infant-mother pairs | \nLaboratory-confirmed influenza (confirmation by viral culture, fourfold rise in HAI antibody in cord serum or rapid test) | \nLaboratory-confirmed influenza decreased among infants born to vaccinated women compared to controls Risk ratio 0.59 (CI, 0.37–0.93) Clinical effectiveness: 41% Hospitalization Risk ratio 0.61 (CI, 0.45–0.84) Clinical effectiveness: 39% | \n
Poehling et al. [126] | \n2002–2009 | \nInfants less than 6 months old hospitalized with fever or respiratory symptoms -151 cases -1359 controls | \nLaboratory-confirmed influenza (confirmation by viral culture or PCR) | \nHospitalized infants whose mothers were immunized were 45–48% less likely to have laboratory-confirmed influenza Adjusted odds ratio (OR) 0.52 (CI, 0.30–0.91) | \n
Sugimura et al. [127] | \n2010–2011 | \n200 infants from birth to 6 months of age -106 infants of vaccinated mothers -90 infants of unvaccinated mothers | \nLaboratory-confirmed influenza (confirmation by rapid test) | \nSignificant difference in incidence of influenza between infants of vaccinated versus unvaccinated mothers ( | \n
Madhi et al. [83] | \n2011–2012 | \n2046 infants -1026 infants of vaccinated mothers - 1023 infants of placebo mothers | \nLaboratory-confirmed influenza RT-PCR | \nVaccine efficacy of 48.8% (CI, 11.6–70.4%) | \n
Clinical effectiveness of maternal vaccination for protection of infants.
In a retrospective cohort study of 48,639 infants, Black et al. found that infants born to vaccinated women had the same risk of hospitalization for influenza or pneumonia as infants of unvaccinated women (CI, 0.889–1.029). They also reported that maternal vaccination was not a significant determinant of risk for ILI or otitis media [81].
\nFrance et al. followed 3160 infants of immunized mothers and 37,969 infants of nonimmunized mothers from 1995–2001 and during four specific seasonal periods: peak influenza, respiratory syncytial virus predominant, periseasonal, and summer weeks [116]. They found no difference in medically attended ARI (incident rate ratio for peak influenza season 0.96, CI, 0.86–1.07), concluding “maternal influenza vaccination did not reduce visit rates during any of the four time periods and did not delay the onset of first respiratory illness” [116].
\nIn a study that included an examination of data over five influenza seasons, Munoz et al. reported similar results, finding no difference in hospitalizations for respiratory illness during the peak of influenza season between infants of vaccinated mothers versus infants of non-vaccinated mothers [117].
\nWhile the three earlier studies above found no benefit to infants from maternal vaccination, a more recent matched case-control study of infants less than 12 months old admitted to hospitals for seasonal influenza between 2000 and 2009 reported maternal vaccination to be 91.5% effective (CI, 61.7–98.1%,
Eick et al. conducted a study in the White Mountain and Navajo reservations over three influenza seasons, November 2002 to September of 2005. In this prospective cohort study, the effect of influenza vaccine during pregnancy on influenza infection in infants was compared between infants of vaccinated women and those born to non-vaccinated women. The authors analyzed 83 confirmed influenza cases. Of these cases, seven (86%) were confirmed by serology, ten (12%) by viral culture, and two (2%) by rapid influenza testing. Using these three measures of influenza infection, the authors reported a 41% reduction in the risk of laboratory-confirmed influenza for infants born to vaccinated women (RR 0.59, CI, 0.37–0.93) and a 39% reduction in the risk of ILI hospitalization (RR 0.61, CI, 0.45–0.84) [120].
\nThe authors of this study pooled the results from three different assay methods, each with different sensitivities, to document influenza infection. Pooling assays with differing diagnostics represents a limitation of this study. Likewise, the use of serology to document influenza in most (86%) of cases represents a weakness of this study. The authors describe serological documentation of influenza infection as a fourfold or greater increase in HAI antibody in serum collected at 2–3 or 6 months compared with previous serum specimen [120]. Significant limitations have been reported regarding the use of serology in diagnosing influenza in adult patients that have been vaccinated with inactivated vaccines [121–123]. Using serology to document influenza infection in young infants presents additional complications.
\nInfants under 6 months of age have immature, immunologically inexperienced immune systems. Since their ability to produce antibody in response to infection is often delayed or completely absent, many of their serum antibodies are maternally derived. More than 50 years ago, the use of serology for diagnosis of influenza in infancy was questioned. During an influenza outbreak in Glasgow in 1953, fourfold increases in antibody were found in only 20% of infants admitted to pediatric pneumonia wards (as compared to 30% of adult cases) [124]. In two different outbreaks, antibody production was absent or considerably delayed in infected children under 18 months of age, even when virus could be isolated [125]. These observations illustrate the difficulties inherent in using serology to document influenza infection in young infants.
\nIn the only randomized, blinded clinical study to assess infant protection, Zaman et al. reported a vaccine effectiveness of 63% (CI, 5–85%) against laboratory-confirmed influenza in infants up to 6 months of age [79]. Influenza was confirmed by rapid test (Z Stat Flu), which was reported to have a specificity of 80–90% and a sensitivity of 70–72% for type A and type B influenza. When respiratory illness and fever were used as measure of disease, the reported effectiveness was 29% (CI, 7–46%) [79].
\nA recent study sought to determine whether maternal vaccination during pregnancy was associated with a reduced risk or laboratory-confirmed influenza hospitalizations in 1510 infants over seven consecutive influenza seasons (2002–2003 through 2008–2009) and across three diverse geographic regions of the United States [126]. Of the 1510 infants hospitalized with fever or respiratory symptoms, 151 (10%) had laboratory-confirmed (by viral culture or RT-PCR) influenza. The proportion of infants who were influenza positive varied significantly across influenza seasons, from 3% in 2006–2007 to 15% in 2003–2004. The percentage of women who were vaccinated also varied by season, from 10% in 2003–2004 to 38% in 2008–2009.
\nAmong influenza-positive infants during all study years, 12% of their mothers reported being vaccinated during pregnancy, while 20% of mothers of influenza-negative infants reported receiving a vaccination [126], yielding an adjusted odds ratio of 0.52 (CI, 0.30–0.91) and suggesting that infants whose mothers received influenza vaccines during pregnancy were 48% less likely to have laboratory-confirmed influenza than infants of unvaccinated women [126].
\nIn a randomized, placebo-controlled trial of influenza vaccination in South Africa, Madhi et al. followed 1026 infants born to women who received IIV3 and 1023 infants born to placebo recipients. The attack rate of influenza was lower among infants of vaccinated mothers (1.9%) than among those whose mothers received placebo vaccine (3.6%), yielding a vaccine effectiveness of 57.5% (CI, 7.6–70.4) in this population [83].
\nIn a prospective study, Sugimura et al. assessed the incidence of fever and laboratory-confirmed influenza in newborns whose mothers were vaccinated during pregnancy with IIV3. Two hundred infants were followed from birth to 6 months of age. Fever was noted in 36 (34%) of the infants in the vaccinated group and 47 (52.2%) of infants born to unvaccinated mothers (
The reviewed studies assessed hospitalization, clinic visits, ARI, or laboratory-confirmed influenza as primary outcomes. Rationale for influenza vaccination often includes additional secondary outcomes such as reduction of absenteeism for household contacts, secondary infections, acute otitis media, or community transmission of influenza. While these outcomes are important in measuring the broad impact of influenza, they do not provide accurate assessment of vaccine efficacy or effectiveness. Such an assessment is essential for evidence-based, reasoned development of public health policy and decision-making about influenza prevention.
\nIn summary, the evidence for newborn protection through maternal vaccination is encouraging, but several studies exhibit methodological limitations. The results of studies measuring rates of ARI, clinic visit, or hospitalization range from no vaccine effect up to 42% effectiveness [81, 116, 117]. The six studies that used some form of laboratory-confirmed influenza (rapid tests, viral culture, or PCR) as the primary outcome are more encouraging, reporting vaccination effectiveness ranging from 41 to 91.5% [79, 83, 118, 120, 126, 127].
\nWhile outcomes and study designs differ, in general the data to date suggest that maternal vaccination has the potential to decrease influenza illness in newborns. As such, maternal immunization during pregnancy should continue to be recommended and encouraged for all women.
\nInfluenza is a complex disease. For centuries it has eluded complete understanding or control. Constantly evolving and catching us by surprise, influenza is a perpetually emerging disease. The main tool for prevention of influenza is vaccination, the cornerstone for prevention of influenza disease. However, unlike many other vaccines, the effectiveness of influenza vaccines remains moderate to marginal across all populations [128], and in addition, the vaccines need to be administered every year. A universal influenza vaccine providing broad and long-lasting protection continues to be elusive.
\nThese realities—difficult enough in the general population—are even more challenging to understand during pregnancy. Particularly complex is determining how, or if, the changing immune responses over pregnancy vis-a-vis influenza season and vaccination schedules impact vaccine effectiveness and disease outcomes in pregnant women.
\nA recent critique by Savitz et al. calls into question our most basic understanding of influenza infection during pregnancy, with a particular critique on the quality of the evidence for a benefit of maternal vaccination in prevention of harm from seasonal influenza [129]. Savitz et al. discuss the complications inherent in many current research practices, which serve to limit our understanding of the true picture of maternal influenza. Central to this critique is the notion that both pregnancy and influenza have temporal components; influenza typically is seasonal, with a 2–3-month period of circulation each year. But pregnancy has trimesters, each with distinct fetal developmental stages along with physiological and immunological changes in the expectant mother. To complicate this further, the risk of adverse outcomes from influenza infection is not equal across all trimesters of pregnancy. Therefore, optimizing risk and benefit of vaccination during pregnancy is complicated and likely requires reexamination of influenza risk and benefit across trimesters in association with months of influenza circulation [129].
\nA recent WHO review of influenza throughout pregnancy found insufficient data from comparable studies to discern which specific weeks, months, or trimesters influenza poses increased risk to pregnant women [130]. Savitz et al. assert that “As with all time dependent states, pregnancies must be followed longitudinally. There needs to be a week-by-week consideration of the pregnancy with regard to vaccination status and circulating influenza viruses” [129].
\nAside from complications associated with potential differences in virus exposure across the trimesters of a pregnancy, risks posed to pregnant women also may differ according to the specific strain circulating during a given season, and, likewise, the immune response to vaccination also could differ based on strain [131].
\nEven when taking yearly strain differences into account, variation in immune responses across trimesters adds yet another complicating variable. It is widely accepted that the immune response to influenza vaccine in pregnant women is indistinguishable from that of nonpregnant women and that gestational age appears to have no effect on antibody response [75, 76, 132, 133].
\nFindings from more recent studies suggest that we may need to entertain a more nuanced approach to our understanding of the maternal immune response to influenza vaccination—precisely because immunogenicity and seroconversion may not tell the entire story.
\nIn a 2011 study, Ohfuji et al. reported a lower seroprotective antibody response to pandemic A(H1N1) vaccine in pregnant women who had received prior seasonal influenza vaccine and suggested that the potential interference between pH1N1 and seasonal vaccination needed additional investigation [15]. Schlaudecker et al. directly compared immunogenicity of inactivated influenza vaccine in pregnant versus nonpregnant women and found that pregnancy modified antibody responses to the vaccine [134]. They demonstrated a significantly decreased postimmunization HAI geometric mean titer and a nonsignificantly decreased geometric mean ratio (fold increase) to influenza A antigens after influenza vaccine, even though overall seroconversion and seroprotection rates were comparable between the two groups of women. In a 2013 blinded randomized control study, Bischoff et al. found that the immune response to an adjuvanted pandemic A(H1N1) vaccine in pregnant women was decreased compared with nonpregnant women [133]. Sperling et al. examined HAI titers over pregnancy and found that timing of vaccination did not alter response, although there was a trend toward lower responses during the first trimester and six weeks postpartum [135].
\nA small study of 36 women during the 2012–2014 flu seasons suggests that T-follicular helper (Tfh) cell response to vaccination was highest during the first trimester of pregnancy. Tfh cells are required for the generation of high-quality antibody-producing B cells. Their expansion has been shown to be a predictor of response to influenza vaccination outside of pregnancy suggesting that immunologic changes during pregnancy may impact vaccine response. Notably, there was no significant expansion of Tfh after vaccination during either the second or third trimester [136].
\nIn a study aimed to determine the optimal timing for vaccination within the second or third trimesters of pregnancy, Yamaguchi et al. reported that serum antibody levels in vaccinated women depended not on gestational stage but on the amount of time elapsed, since vaccination antibody titers decreased with time [110]. This observation is supported by other studies documenting that influenza-specific antibodies after vaccination are typically short lived [115].
\nTwo separate studies of vaccine effectiveness in nonpregnant adults during the 2011–2012 influenza season also suggest that vaccine effectiveness wanes with time since vaccination [137, 138]. In both of these studies, vaccination effectiveness waned in people who were vaccinated 93 days—around 3 months—or more before presentation of symptoms. A similar observation was made by Fisher et al. who demonstrated a significant linear decline over time in HAI titers after pH1N1 infection or vaccination (
Taken together, these observations support a consensus that pregnant women are capable of mounting a robust immune response to influenza vaccination during the second and third trimester of pregnancy. Experimental evidence during the first trimester is less clear, due in part to a limited number of studies on influenza vaccination during the first trimester.
\nThere is increasing evidence suggesting that—regardless of initial vaccine response—the level of vaccine-mediated anti-influenza-specific antibodies decreases with time. This waning of antibody implies that women vaccinated during the first trimester of pregnancy might be
Cross-placental transfer of immunity occurs when antibodies cross the placenta via active transport, particularly in the final weeks of pregnancy. It is logical to assume that vaccine-induced maternal antibody transmitted to the fetus will provide protection to the infant during the first months of life, and several studies document increased antibody titers in infants of vaccinated mothers [120].
\nComparable to studies of vaccinated mothers, researchers have demonstrated that the titers of influenza-specific antibodies in newborns, while not affected by trimester of maternal vaccination (within second or third trimester), do wane with time and are short lived [75]. Tsatsaris et al. also noted a trend toward lower cord blood antibody titer associated with longer intervals between maternal vaccination and delivery. A similar observation was made by Yamaguchi et al. who reported that transfer rate from the maternal blood to the fetal blood at time of delivery tended to be inversely correlated with duration of gestation postvaccination [110]. Some additional studies have hinted at lower cord blood titers among infants of women vaccinated in the first trimesters, but it is unclear if this is clinically significant [131].
\nTaken together, these studies serve to highlight the complicated nature of immunity particularly during pregnancy in response to vaccination and invite further virological and epidemiological studies to confirm and fully understand these observations and to correlate changes in antibody titer with clinical outcomes in both mothers and infants. As our understanding evolves, we may need to develop a more nuanced approach—one that takes into consideration the trimester of exposure to both circulating virus and vaccines—to optimize vaccine effectiveness during the period of highest risk of influenza disease.
\nThe recommendation to vaccinate all pregnant women regardless of gestational age is motivated in part by operational concerns. Timing of the influenza vaccine campaigns occurs in the fall in temperate regions. Pregnancy, on the other hand, occurs throughout the year. Since pregnancy presents a period of regularly scheduled and repeat visits, a more tailored approach to influenza vaccine coverage may be appropriate in order to stack the odds in favor of the highest level of protection for both mother and infant.
\nThe impact of influenza infection on pregnant women and newborns is well documented. The increased risk for morbidity and mortality has resulted in the universal recommendation that pregnant women be vaccinated for influenza at any stage of pregnancy [65]. Evidence to date suggests that influenza vaccination during pregnancy is similarly effective as in the nonpregnant population. Pregnant women mount robust immune response that correlates with clinical efficacy. This immunity then is transferred to the fetus during gestation, providing clinical benefit to infants less than 6 months of age. And while not a component of this review, there is substantial evidence that influenza vaccines are safe during all stages of pregnancy with no evidence of risk of adverse pregnancy outcome linked to influenza vaccines [3, 65, 131, 139, 140].
\nGaps remain in our understanding of influenza risk over all seasons and trimesters, of maternal immunity, and of optimal timing of vaccination. To this end, in January of 2015, the Bill and Melinda Gates Foundation held a meeting of global stakeholders in the maternal influenza field. Participants identified a need for stronger evidence regarding, among other issues, the burden of disease and maternal immunization efficacy [141]. Expanding this evidence base will allow for a deeper understanding of influenza in this population and the development of more robust and efficacious public health approaches toward this disease.
\nWhile sustainability may be a relatively modern concept, attempts to understand the proper relationship between humanity and nature date back at least to ancient Rome and Greece. Unlike the modern world where science, religion, and philosophy tend to be discrete subjects with their own, distinct views on ecology, in the ancient Mediterranean these subjects were understood and studied together. As a result, ancient Greco-Roman thinking on sustainability and ecology was informed by a unique intersection of religion and science. For ancient Greek thinkers like Plato and Aristotle, for example, understandings of the natural world were part and parcel of a broader, philosophical exploration of both the nature of humanity and the nature of divinity. To understand whether nature was divine, for example, had important ramifications for understanding not only how nature operated scientifically but also how we should interact with other plant and animal species. For ancient Greco-Roman thinkers, the ethics of sustainability were inseparable from their metaphysics.
Ancient views on the metaphysical relationship between sustainability, ecology, religion, and science were not uniform, however. Key differences can be found not only in general metaphysical perspectives but specific views on ecology, such as around the notion of extinction. Some of our earliest thinkers such as Aristotle believed that extinction was impossible because creation was divinely ordained and largely outside the purview of human activity. But other thinkers, particularly from the school of philosophy Stoicism, diverged from Aristotle in understanding extinction as a terrible, irreversible event. In both cases, metaphysics similarly underpins views on sustainability, but different views on sustainability arise as a result of different metaphysical assumptions and understandings.
The same is true in modern thinking, from the Renaissance onward. In many ways, influential thinkers on modern ecology such as Alexander von Humboldt and Charles Darwin replicate the same debates around sustainability and ecology we find in ancient thought. Like the debates in Greco-Roman thought, key differences in metaphysical understandings of nature explain differing views on ecological topics such as extinction and humanity’s ethical obligation regarding sustainability. By exploring and comparing a variety of historical periods’ views on the intersection of sustainability, ecology, religion, and science, we can identify how our own metaphysical understandings and assumptions today can lead to a more ecologically sustainable future.
In many ancient Greek and Roman traditions, it was believed that the natural world was created to provide for humankind. Humanity, as a higher-order lifeform, had natural dominion over all other organisms (e.g. plants and animals) and was thus fully warranted to utilize its authority for personal gain. As early as Homer’s
Ancient philosophical and scientific views reflected this same attitude regarding the hierarchical relationship of humanity to nature, starting with Plato (5th century BCE). Plato’s tripartite view of the self – reason, spirit, and appetite – held that while humanity shared its appetitive characteristics with other organisms such as animals, humanity was distinguished by its unique possession of reason which allowed the soul to ascend to a higher contemplative state [4]. Aristotle (4th century BCE) followed his teacher in emplacing humanity at the top of the creaturely hierarchy, and progressed even further by discussing in greater detail the relationship between humanity and nature. Underpinned by Plato’s ontological foundations, Aristotle’s view of the hierarchical relationship of humanity and/over nature became dominant and largely persisted in the western world – with exceptions, discussed below – until the European Renaissance.
Aristotle follows Plato by asserting that humanity is superior to nature on the basis of our rational character, which is not shared by other animals, much less plants or natural objects [5, 6, 7]. Aristotle understands this hierarchy teleologically, where everything in nature exists for a function – a notion that underpins many of his other scientific views too. This results in the conclusion that nature, and all of its many constituent parts lacking rationality, are subservient to rational humanity [8]. Aristotle famously and explicitly articulated this view in the
This view, of what is ultimately a divine and providential understanding of nature undergirded by an anthropocentric metaphysics, is widely present in both Peripatetic and Middle/Late Stoic thought (3rd century BCE – 3rd century CE). We will see many parallels in our treatment of Stoicism below.
Aristotle was aware of the fact that ecological exploitation could result in the decline of a wild species’ population, but also held the belief that the creation of life happens spontaneously and continuously, in a manner irrespective of human conduct [10]. In
Aristotle extends his naturalistic theories to metaphysics, as “the explanation of animal generation also has metaphysical importance for him … the generation of an entity must be explicable within that system.” [15] For Aristotle, all generation – spontaneous and not – depended not only on localized conditions (which might conceivably be influenced by humans) but more fundamentally on the metaphysical conditions of the cosmos more broadly, namely “the activity of the heavenly bodies upon the
Theophrastus (4th-3rd century BCE), successor to Aristotle, articulated this view well: he claimed that the silphium plant came into existence as a result of “spontaneous generation” after a black rain of a “heavy, pitchy” nature blanketed the region of Cyrenaica (present-day northeastern Libya) in the 7th century BCE [16]. Here, Theophrastus mirrors the broadly providential view of nature that Aristotle held: the loss of any one plant or animal species was only temporary and humanity’s influence on the environment marginal. After all, any species whose population had been diminished by human activity could spontaneously reappear at any moment. Extinction in the modern, permanent sense of the word was simply impossible according to Aristotle’s (dominant and highly influential) scientific and metaphysical views.
One figure stands apart from this Aristotelian strand of thought: Pliny the Elder. Pliny (23–74 CE) was a highly distinguished member of ancient Roman society. Over his life he held important military positions and was closely connected with the political elite, for example a direct friendship with Vespasian [17]. He was also prolific in his literary output, which included not only historical works but also extensive work in the natural sciences [18]. Most notable in the latter was his
Pliny’s work contains many prior influences from Aristotle and subsequent philosophical traditions [19]. In fact, his
Pliny also follows Aristotle in the importance granted to the spontaneously generative power of wind and rain. He variously describes reports of matter falling from the sky, ranging from the mundane (stones; tiles) to the alarming (milk; blood). While the former might be explained away by the wind taking up material objects, the latter is not explained but merely highlighted as a given (1.2.38, 57) [14]. Pliny even notes the generation of plants in this manner, reiterating Theophrastus’ account of silphium’s appearance as an example (3.16.61) [14]. He concludes broadly that “All these productions owe their origin to rain, and by rain is silphium produced”, right in line with Aristotle (4.22.48) [14]. However, in nearly every such instance, Pliny provides details such as the location and date, perhaps to suggest that he himself is skeptical and that the reader should go confirm the occurrence of these events for themselves.
Importantly, Pliny expands this conclusion with a claim that notably departs from the prevailing ecological theory of his predecessors: “As already observed, the silphium of Cyrenae no longer exists.” (4.22.48) [14] Indeed, it is in
This conclusion begs a series of questions around ancient ecology and religion. If Pliny believed that the natural world providentially furnished things for humanity, what would it mean that one could no longer exist? How could the extinction of a species be permanent if that same species were the product of natural forces such as wind and rain? If humanity has little power over these divine and natural forces, how could we even force something to go extinct if we tried?
We argue that the key to answering these questions can be found in Pliny’s metaphysics, in particular at the intersection of religion and ecology. This intersection reflects a particular brand of Stoic thinking that highlights a fundamental tension in Stoic thought around the role of humanity and its relationship to a divinely understood nature.
Pliny’s metaphysics take influence from both Aristotelian and prior Stoic views (among others) that there is a power beyond humanity over which we have little control. Pliny clearly conceives of nature in the classic Stoic sense as divine, not in a deistic sense of an agential and person-like god, but rather in a broader and more abstract sense of the divine. He asserts that the “world, and whatever that be which we otherwise call the heavens … we must conceive to be a deity, to be eternal, without bounds, neither created, nor subject, at any time, to destruction.” (1.2.1) [14] As such, he asserts that “it is ridiculous to suppose that the great head of all things, whatever it be, pays any regard to human affairs.” (1.2.5) [14] It is clear that nature, in the sense of ecology, is understood as itself a divine force: “the power of nature is clearly proved and is shown to be what we call god.” (1.2.5) [14] In this paradigm, nature cares little for humans because we are merely small creatures living within the grand operations of the cosmos; therefore nothing we do can truly influence nature. Such a line of thought largely underpins Aristotelian and some Stoic views, leading to the notion that it is not possible for human actions to cause the extinction of a species.
Pliny, however, comes to a different conclusion. Although he clearly understands nature as a divinity, he does not view nature as an agential and a person-like god. Nature, therefore, cannot operate according to whims, desires, and intentions; in other words, not like the gods classically understood in Greek mythology. Rather, the divinity of nature operates according to universal principles, such as those of science:
Nature, as with god, cannot bring somebody back to life or change the past or any number of other things. Nature is limited by nature’s own inherent operations.
This point helps explain Pliny’s earlier comments around humanity’s inability to create, destroy or otherwise alter the natural world. When Pliny states that humanity cannot affect nature (which is framed as a god), he is asserting that humanity cannot change the fundamental workings (e.g. natural operations; universal laws) of the universe. These not only include the known processes of the natural world (e.g. gravity, geology, reproduction, chemical and biological change, etc.) but also the unfounded natural processes which Pliny believed to have existed (e.g. spontaneous generation of organisms and material objects). In stating this, Pliny is
Pliny’s differentiation (causes/operations vs. effects/manifestations) is crucial, as it allows him to take a wider view on the deleterious effects of human actions on the natural world. In poetic language strikingly similar to modern ecological writing, Pliny takes a dark view of humanity’s ecological behaviors:
Nature is readily anthropomorphized, in a prototypical blend of religion and ecology, as Pliny notes that the natural ecological balance theorized by prior thinkers was about meeting natural needs. By contrast, humanity’s avarice for “luxuries” beyond “mere support” leads to nature being “continually tortured”, being penetrated for mineral extraction, and having her entrails torn out sheerly for the sake of human decoration.
Along similar lines, Pliny affords nature some broad agency, using the extractive relationship of humanity and nature to explain why the “Earth should have produced anything noxious”. Humanity, it seems, has upset the divine and natural order, with resulting consequences. In another strong echo of modern ecological writing, Pliny then continues to say that all of this exploitation of the natural world would result in disastrous consequences for humanity, “inasmuch as all this wealth ends in crimes, slaughter, and war” (1.2.63) [14]. By upsetting the divine and natural order, in the end we are only hurting ourselves. And nature – well, she will exist long after we are gone: “while we drench her with our blood, we cover her with our unburied bones; and being covered with these … her anger being thus appeased.” (1.2.63) [14] Nature is both divinely anthropomorphized and understood as unified with the human condition; in doing the Earth wrong we do ourselves wrong as we are part of nature; and ultimately this is all understood not only in a clear scientific context of cause and effect between the natural and human worlds but also in the urgent terms of a sincerely held religious view of our place in the cosmos.
Pliny’s views are strikingly written, novel with regard to the recognition of extinction, and distinct in their ability to link together religion and ecology in a way that finds parallels in the modern world. Indeed, we will treat the latter parallels explicitly in our next section. But in the context of ancient Greco-Roman views around religion and ecology, Pliny’s views highlight an interesting tension in the predominant religion-ecology nexus of the day, as found in ancient Stoicism.
Philosophically, Pliny is probably aligned closer to Stoicism than any other philosophy. We must caution that he was not a systematic and whole-hearted Stoic through and through [22]. But particularly his natural philosophy, that intersection between ecology and religion, was clearly and most strongly informed by Stoicism [23]. Sometimes specific aspects of his thought can even be traced with confidence to certain Stoic thinkers [24]. More broadly, he was not only familiar with foundational ideas from Stoicism and key texts and thinkers such as Zeno (4th-3rd century BCE, founder of Stoicism) [23], but also a variety of other philosophers from whom he freely drew [25]. So while we focus here on Pliny’s Stoicism in light of other Stoic thought, it is important to remember that Pliny’s use of ancient philosophy was not confined to Stoicism alone.
In Stoicism, however, there were notable differences of thought, with debate around subjects such as cosmology, ethics, and human nature. Despite core, shared ideas across different thinkers, Stoicism was no monolithic system of thought and it contains both disagreements between thinkers and changes over time and. We argue that one of these internal Stoic debates which has not yet been fully recognized or explored is the relationship of humanity to nature. In the language of our conclusions above regarding Pliny, Stoic thinkers varied in how they understood the relationship of religion and ecology.
We identify two general poles in Stoicism around the relationship of religion and ecology. One pole, which we have already explored above, generally follows the Platonic and Aristotelian view: Humanity was created as a higher order being in a hierarchically ordered universe, and it is therefore natural and in some sense good for humanity to make use of and even dominate the natural environment.
Stoic thought roughly contemporaneous to Pliny, in the first and second centuries CE, is full of these ideas, ranging from Epictetus to Seneca the Younger to Marcus Aurelius. Perhaps most famously, Marcus (2nd century CE, a century after Pliny) wrote in his
More proximately to Pliny, meanwhile, we find similar ideas expressed by Epictetus and Seneca. Epictetus, in his
Such a view aligns easily not only with Marcus and some of Pliny’s comments but also the ecological-hierarchy view of Aristotle. Nature has some things ready made for others and humans are rightly in charge over cattle; hierarchy and the ruling of one organism over the other is natural and even good.
This notion of some organisms being naturally created for service to others finds clear parallel in Stoic views of the body. This is best espoused by Seneca the Younger (1st century CE), who writes:
The body makes for a ready parallel to nature, the micro in the macro, as individual elements of the body are created for and function in service to the whole. One would readily cut off a finger to save an entire organism, and as such there are clearly aspects of the body which are subservient to the whole and therefore relatively expendable.
Extending this view to a macro, cosmic scale, this metaphysical and religious view of our place in the universe underpins Stoic ethics, in particular the view that suffering and death are ultimately inconsequential. A single human life is to the universe as, perhaps, a fingernail is to an individual human. Just as the universe might see fit in its grand operations to destroy us individually or as a species, so too we should think nothing of cutting off and discarding a fingernail. In both cases these operations are natural and, in that Stoic sense, good. By the same logic, some organisms higher in the grand hierarchy of nature can and even should make use of others.
There is a second pole of Stoic thought, however, that speaks to how humanity should not simply exploit and extract and dominate, but rather exercise our reason to live in harmony. This view is also, in fact, derived partly from Platonic and Aristotelian views privileging the rational mind of humanity. Yet instead of seeing humans at the top of a hierarchy and justifying domination, our place at the top of the created hierarchy results from reason, which – when properly exercised according to Stoic principles – results not in violence but in harmony. Thus, Epictetus can write the following too:
While the first part of this passage seems to reflect the more extractive, dominating view seen in our first pole of Stoic thought, here the conclusion is notably different. It is indeed “shameful” for humans to do what animals do, presumably fight, suffer, and struggle over narrow and instinctual concerns. Instead, humanity’s rational nature calls us to a higher purpose as our “nature ends in contemplation and understanding”, an echo of Platonic influence. Conforming to nature does not simply involve participating in a violent, exploitative hierarchy of being, but rather this “life conformable with nature” is one that is aware of, and attentive to, one’s effects on others. ‘Conforming’ denotes adaptation and accommodation, not bending others to one’s own will, whim, or preference.
We see this second, accommodating pole of Stoic ecological thinking voiced severally by Seneca. Seneca writes that the proper operation of nature has to do with the notion of sufficiency:
The proper functioning of nature manifests an ecology in a state of equilibrium. Of course, some things naturally make use of other things (the creature in the egg and the liquid within), which well matches the first pole of Stoic thought, but this ‘making use’ reflects
Indeed, Seneca understands the world in terms of a balanced reciprocity according to natural need and consequent use:
Nature operates in a balance and the natural operation of its parts maintain that balance. If humans take a natural amount – such as for their natural “nourishment” per the earlier quote above – then the Earth will reciprocally take and in turn provide this nourishment. However, moving beyond what is natural – to take more than what is necessary for mere nourishment – will upset this balance:
Nature provides if its constituent parts behave accordingly. If the parts do not behave according to their nature (e.g., nourishment alone) then what follows is inevitably “destruction”. Crucially, this destruction will occur via violence amid the world itself (“such a change cannot occur without the world being shaken”). Deviations from nature will invite consequences that will convulse the world and punish humanity as a result, for indeed we are a part of nature. To continue our body analogy from earlier, if a finger ceases to operate properly by harming the body, it will be subject to inevitable destruction. This destruction will harm the greater whole (body = nature) but will certainly punish the offending part (= organism/species).
This line of metaphysical thinking aligning religion and ecology readily reflects widely held Stoic understandings of ethics. In Stoicism, one should behave according to one’s general nature as a species (which Stoics call ‘a good’) and even according to one’s individual desires (which Stoics label a ‘preferred indifferent’, being neither good nor bad). A human can therefore be justified in using violence to defend their life because of an organism’s basic biological rights and nature directed toward survival, but not justified in using violence simply to get what one desires.
Indeed, Stoic ethics generally do not espouse violence but rather acquiescence; not domination but rather peaceful differences; and not extraction for excess but rather making do with the bare minimum. This is not only a metaphysical view about the ideal ‘Stoic sage’ and our relationship to the cosmos but also has clear applications to our micro-cosmos too, namely our ecological environment. Just as Stoics argued we should generally accept our lot in life and seek no more than demanded by nature for sufficiency, by extension so too should we use nature and other organisms where necessary but never to a point of excess. One must eat, but never feast; one must kill to survive, but never for sport; one might need to extract resources to build a house to survive the winter, but this does not mean one is justified in extracting resources for ornamentation.
Furthermore, deviating beyond what is necessary for mere “nourishment”, to again use Seneca’s term, is ultimately a recipe for destruction. Firstly, it results in the forfeit of one’s individual virtue and thereby doing oneself violence – Stoics label as ‘bad’ anything that undermines virtue. But secondly, it also harms the wider environment (nature/god itself) which in the Stoic metaphysical and religious view is ultimately aligned with the self, just as the finger is identified with the body but should never be privileged before it. Any wider damaging of nature/god disturbs natural order, and this disturbance is not only bad for nature/god (a metaphysical and religious ill) but will also ultimately result in partial or complete self-destruction. For this line of Stoic thinking, ecology
The ancient extinction of silphium seems to reflect the second pole of Stoic thought that we have detailed here. The harvesting and use of silphium was natural and normal, and in that sense good, as part of our biological existence on this Earth. But over-harvesting beyond what was necessary for nourishment showed improper judgment, both about ourselves and the natural world. Because we
From an ecological point of view, certainly the first consequence – that we sacrifice our own virtue when we take more than is necessary – has continued to bear out time and again over the course of human history. A philosophical orientation toward nature of unfettered use and extraction beyond the survivalist minimum has resulted in cultural attitudes of extraction, imperialism, and a host of hierarchical and bigoted views ranging from neo-colonialism to outright racism. A capitalist ideology of profit maximization for personal gain will doubtless incentivize productivity and capital production, but at the cost of disincentivizing a virtuous relationship, not only with nature but with each other too.
The second ecological consequence is even more obvious: an attitude of not living in ecological balance and self-sufficiency has resulted in an unprecedented rate of species extinction, both plant and animal [29, 30]. The so-called ‘Anthropocene Epoch’ has been so devastating to other biological life on Earth that this era of human dominance has been rightly faulted for “the sixth mass extinction” [31]. Pliny’s Stoicism, which recognized that humans can destructively influence nature to the point of making a plant go extinct, was simply the beginning. To this we can add the many ways that, as Stoics predicted, the Earth has responded with violence to both itself (“the world being shaken”) and humanity (“destruction”): anthropogenic climate change and hazardous pollution are the two most ready examples that come to mind, to say nothing of the warlike destruction our species visits upon itself with historical regularity.
Modern ecological thinking has attempted to redress our relationship with the natural world in a manner strikingly similar to ancient Stoicism, by re-thinking nature and our place in it in metaphysical and religious terms. In ancient Stoicism, Seneca described a view of nature that emplaces humanity within the framework of religious humility, as he is baffled by humanity’s narrow-mindedness around our place within nature while being simultaneously in awe of nature and its grand operations. These two operate side by side:
Seneca continues, framing the issue truly as a matter of good and evil, extending the religious view of ecology in the previous quote:
Humans have moved far beyond nourishment and, in Stoic terms, have acted non-virtuously, extracting not out of necessity but out of greed. This is all fundamentally baffling, for our desires and wants and wars are miniscule in a metaphysical view that blends nature with god:
Such views are striking, not only in their poetry but in their similarity to modern ecological writings, especially those with a more religious, spiritual, or new-age bent. The origins of modern environmentalism and ecology can be rightly traced to the work of Alexander von Humboldt (1769–1859), the famous naturalist, explorer, and polymath whose influence in the world of nature science was so colossal and unparalleled it is difficult to overstate [32].
Among Humboldt’s many scientific contributions, one of his most lasting was the view of nature as a unified whole governed by inter-relationships, personified in his magnum opus
In a fascinating parallel to the two poles of ecological thinking we found in ancient Stoicism, we see a similar dynamic playing out in the work of Humboldt and Darwin around their views of nature. Scientifically, Humboldt and Darwin are rightly understood as part of a single intellectual lineage, for they both understood nature as acting upon and within itself, and as both highlighting the importance of understanding nature holistically in terms of the inter-relationship of all its parts, ranging from climate to population dynamics to the dynamism of natural change.
But there is a core difference between the two in terms of how they understood nature’s holism [33]. Humboldt took the much broader view, that nature can and should be understood holistically, that ecology in the large was to be understood as a single organism functioning in harmonious equilibrium. By contrast, Darwin focused on the notion of competition (so-called ‘survival of the fittest’), that nature was teeming with violence and the struggle for resources. In the words of Stephen Jay Gould, there are (at least) three fundamental “aspects of the new Darwinian world. All confute central aspects of Humboldt’s vision” [33]. First, Darwin believed that “Nature is a scene of competition and struggle, not higher harmony” as Humboldt believed [33]. Second, also contra Humboldt, Darwin argued that “Evolutionary lineages have no intrinsic direction toward higher states or greater unification. Natural selection is only a process of local adaptation” [33]. And third, Darwin concluded that “Evolutionary changes are not propelled by an internal and harmonious force”, which departed strikingly from Humboldt’s own conclusions [33].
Darwin understood nature locally and brutally, with a series of random, weighted events propelling survival and speciation outcomes. Humboldt saw nature broadly and beautifully, with a sort of divine order and harmonious outcome of balance. Of course, both are true biologically, as it is simply a matter of scale: at the micro level of individual organisms and species you see savage and unrelenting violence and competition; at the macro level of an entire ecosystem, however, one sees harmony, balance, and beauty. It merely depends on one’s own metaphysical view of where to locate the truth of nature.
Humboldt was himself not religious. Indeed, he does not mention God once in his magnum opus
Humboldt’s more spiritual perspective on nature therefore lent itself to later ecological thinking along these lines. He was particularly influential, for instance, on the scientific (and sometimes even religious) views of later ecologists in the West. This includes both more historically proximate writers such as Henry David Thoreau (1817–1862, a founder of modern naturalism) and Ralph Waldo Emerson (1803–1882, leader of transcendentalism), but also later preservationists such as John Muir (1838–1914, the key driver for the founding of the National Parks System in the United States, which in turn became a model for the global West) and Rachel Carson, whose 1962 book
Humboldt’s view also gave rise to analogical thinking in the humanistic and political sphere. He thought, for example, that because all of nature was unified and beautiful in its diversity, that such principles extended to human culture as well. He was therefore a strong proponent of cultural and racial equality, arguing loudly and across his entire life against slavery and in favor of equal rights to those oppressed by the European colonial empires [32]. For Humboldt, colonialism and theories of racial hierarchy were environmentally destructive too [32], showing the fundamental linkages between all of nature, not just plants and animals but humanity and human systems of politics too.
By contrast, Darwin’s view – of competition, violence, and hierarchy – well parallels the first pole of Stoic ecological thinking, that such principles are natural and normal in nature. The founders of modern naturalism and ecology, in other words, continued to struggle with the same tension we see in Stoicism. And while Humboldt made no mention of God in
In the words of a modern interpreter of Darwin, “Darwin invokes the “Creator,” but leaves him out of the work of life and death … The Creator may impress his laws on matter, but the laws of matter are all that are revealed by the phenomena Darwin investigates.” (xxv) [35] Like Humboldt, Darwin’s thought includes the “absence of divine intention” (xxv) [35], but while Humboldt is comfortable excluding deism entirely, Darwin is still willing to engage with the notion of a Creator. Humboldt’s religious views seemed to abstract away entirely from a creator god in terms of his ecological metaphysics; Darwin seemed to allow for a creator god but, in a manner strikingly similar to our second pole of Stoic thought, Darwin believed that divinity could be found in the metaphysical and scientific principles of nature while things like extinction were due to “secondary causes” such as human influence.
Darwin’s thought, meanwhile, gave rise to a very different kind of humanistic and political thinking from Humboldt’s. While Darwin himself was no racist or bigot and indeed was explicitly anti-slavery [36, 37], the notion of ‘Social Darwinism’ was later derived from his thought [38]. This idea – that hierarchy is natural and normal and thus such principles should also apply to human society – was used for decades in an attempt to justify slavery, racial hierarchy, and colonialism. Just as with Humboldt, we see that one’s metaphysical views of nature are extended into the world of politics and culture too. One might well favor Darwin’s biological perspective, and indeed there is a reason that we remember his name more than Humboldt’s when it comes to his theories of nature and its operations, but Humboldt’s more spiritualist view of metaphysical unity certainly leads to a more sustainable, holistic, and equitable view of human diversity.
We can now return to the idea that began our paper, extinction, and the role of scientific and religious thinking in its understanding. Our modern understanding of extinction stems from the work of Georges Cuvier (1769–1832), a contemporary of Humboldt whose scientific ideas cohere in some ways with the shared Humboldtian and Darwinian ecological frameworks. In Cuvier’s
Cuvier took the opposite view, arguing in favor of extinction and firmly opposing the idea of species adaptation:
Here, Cuvier proposed a revolutionary idea for his time: animal remains found in the fossil record offered clear evidence for species extinction. Yet in the same stubborn breath, he perhaps made the biggest blunder of his academic career by dismissing Lamarck’s idea that species could adapt to changing environments. In hindsight, we know that neither Lamarck nor Cuvier were entirely correct, but each of them had made an important contribution to the broader understanding of life on Earth.
Cuvier believed that all species were perfectly adapted to their environments and as a result, any significant change of those environments could threaten their very existence. This idea aligns closely with the Humboldtian view of nature’s harmonious balance of interrelated species, each of which occupies a unique ecological niche to the benefit of the larger whole. However, Cuvier did not always see nature as beautiful, but rather as a brutal system plagued by shocking changes, intense competition, and occasional catastrophes. This view – which parallels Seneca’s previous assertion that disturbing the balance of nature would result in its destruction – influenced Darwin’s own ideas about competition, ecological change, and extinction. Extinction, according to Darwin, only occurs when a species is unable to adapt to their changing environment.
Cuvier’s outright dismissal of species adaptation was in effect an intellectual roadblock, preventing him from capturing the whole picture of natural selection. In doing so, he also left open the major question of how species are created, lending credence to the ancient ideas of spontaneous generation and godly creation. Indeed, Cuvier’s own stance was widely used by creationists and those seeing divine design in nature [43], a position that has persisted in small and non-scientific areas of thinking today.
In this chapter, we have surveyed key strands of thought in the western tradition, both ancient and modern, around the relationship between religion, science, ecology, and sustainability. In the ancient Mediterranean, the most influential explorations of this relationship include Aristotle and the later Stoic tradition. Our earliest views in ancient Greece saw nature as providential, divine, and therefore not allowing for human-caused extinction such as those of plants or animals. Later Stoic views, in particularly Pliny the Elder, noted the extinction of the famous and valuable plant silphium.
This extinction event illuminates a key difference between ancient Stoic thinkers. While Stoicism generally holds to a metaphysical view of nature as divine, Stoics themselves differentiated on the extent to which humans can and should exploit nature and its resources. We identified two poles of thinking in ancient thought: one pole that followed Aristotle in arguing that nature’s divine providence results in hierarchical exploitation being natural and therefore to some extent good; and another pole that departed from Aristotle, especially as articulated by Pliny, in arguing that nature’s divine providence results in hierarchical exploitation being unnatural and therefore to some extent bad. This difference results, we think, from the core metaphysical orientations of these two poles, regarding the nature of religion and ecology. The former pole sees sustainability outside the province of humanity, while the latter pole sees sustainability as a crucial element of one’s proper religious and philosophical orientation to the universe.
In the later west, we see this same metaphysical intersection, encompassing all of science and philosophy and religion around the subject of ecology, in the pioneering work of Alexander von Humboldt and Charles Darwin. Although aligned in a great many ways, Humboldt and Darwin departed in crucial ways around the nature of ecology. Humboldt’s metaphysical views of the cosmos see unity and harmony as fundamental principles, and therefore that human’s extractive behaviors are abnormal and morally wrong, going against the very principles of the universe. It is for this reason that Humboldt’s thought had an outsize effect on later syntheses of ecology, philosophy, religion, and sustainability, ranging from transcendentalism to modern eco-spiritualists. Such lines of thought in Humboldt and subsequent thinkers in his lineage well parallel the second pole of Stoic thinking, as found in Pliny but also in others such as Seneca and Epictetus, that views humanity as potentially destructive of nature’s natural and divine harmony. In this view, extinction is unnatural and fundamentally bad; humanity’s influence has resulted in a host of deleterious extinctions.
Darwin, by contrast, viewed competition and struggle as fundamental principles of nature. While Darwin did not pursue the humanistic social and political implications of his thought as Humboldt did, this metaphysical stance was appropriated by later thinkers who believed that the hierarchy and violence found in natural were natural and therefore good, using this stance to justify deplorable political, economic, and social systems. In this way,
An attention to both ancient and modern thought helps us today to illuminate the relationship between science, philosophy, and religion around the subjects of sustainability and ecology. Influential voices in history have essentially argued in favor of the hierarchical exploitation of nature and non-sustainable ecological practices. However, other important voices have identified sustainability as a crucial dimension of our ideal religious and metaphysical stance. The issue of species extinction in particular highlights how thinkers, both ancient and modern, explore the relationship between sustainability, ecology, religion, and philosophy. A goal of ecological sustainability is not only metaphysically possible within the history of western scientific and religious thinking, but also justified by thinkers ranging from Pliny the Elder to Alexander von Humboldt and beyond.
"Open access contributes to scientific excellence and integrity. It opens up research results to wider analysis. It allows research results to be reused for new discoveries. And it enables the multi-disciplinary research that is needed to solve global 21st century problems. Open access connects science with society. It allows the public to engage with research. To go behind the headlines. And look at the scientific evidence. And it enables policy makers to draw on innovative solutions to societal challenges".
\n\nCarlos Moedas, the European Commissioner for Research Science and Innovation at the STM Annual Frankfurt Conference, October 2016.
",metaTitle:"About Open Access",metaDescription:"Open access contributes to scientific excellence and integrity. It opens up research results to wider analysis. It allows research results to be reused for new discoveries. And it enables the multi-disciplinary research that is needed to solve global 21st century problems. Open access connects science with society. It allows the public to engage with research. To go behind the headlines. And look at the scientific evidence. And it enables policy makers to draw on innovative solutions to societal challenges.\n\nCarlos Moedas, the European Commissioner for Research Science and Innovation at the STM Annual Frankfurt Conference, October 2016.",metaKeywords:null,canonicalURL:"about-open-access",contentRaw:'[{"type":"htmlEditorComponent","content":"The Open Access publishing movement started in the early 2000s when academic leaders from around the world participated in the formation of the Budapest Initiative. They developed recommendations for an Open Access publishing process, “which has worked for the past decade to provide the public with unrestricted, free access to scholarly research—much of which is publicly funded. Making the research publicly available to everyone—free of charge and without most copyright and licensing restrictions—will accelerate scientific research efforts and allow authors to reach a larger number of readers” (reference: http://www.budapestopenaccessinitiative.org)
\\n\\nIntechOpen’s co-founders, both scientists themselves, created the company while undertaking research in robotics at Vienna University. Their goal was to spread research freely “for scientists, by scientists’ to the rest of the world via the Open Access publishing model. The company soon became a signatory of the Budapest Initiative, which currently has more than 1000 supporting organizations worldwide, ranging from universities to funders.
\\n\\nAt IntechOpen today, we are still as committed to working with organizations and people who care about scientific discovery, to putting the academic needs of the scientific community first, and to providing an Open Access environment where scientists can maximize their contribution to scientific advancement. By opening up access to the world’s scientific research articles and book chapters, we aim to facilitate greater opportunity for collaboration, scientific discovery and progress. We subscribe wholeheartedly to the Open Access definition:
\\n\\n“By “open access” to [peer-reviewed research literature], we mean its free availability on the public internet, permitting any users to read, download, copy, distribute, print, search, or link to the full texts of these articles, crawl them for indexing, pass them as data to software, or use them for any other lawful purpose, without financial, legal, or technical barriers other than those inseparable from gaining access to the internet itself. The only constraint on reproduction and distribution, and the only role for copyright in this domain, should be to give authors control over the integrity of their work and the right to be properly acknowledged and cited” (reference: http://www.budapestopenaccessinitiative.org)
\\n\\nOAI-PMH
\\n\\nAs a firm believer in the wider dissemination of knowledge, IntechOpen supports the Open Access Initiative Protocol for Metadata Harvesting (OAI-PMH Version 2.0). Read more
\\n\\nLicense
\\n\\nBook chapters published in edited volumes are distributed under the Creative Commons Attribution 3.0 Unported License (CC BY 3.0). IntechOpen upholds a very flexible Copyright Policy. There is no copyright transfer to the publisher and Authors retain exclusive copyright to their work. All Monographs/Compacts are distributed under the Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0). Read more
\\n\\nPeer Review Policies
\\n\\nAll scientific works are Peer Reviewed prior to publishing. Read more
\\n\\nOA Publishing Fees
\\n\\nThe Open Access publishing model employed by IntechOpen eliminates subscription charges and pay-per-view fees, enabling readers to access research at no cost. In order to sustain operations and keep our publications freely accessible we levy an Open Access Publishing Fee for manuscripts, which helps us cover the costs of editorial work and the production of books. Read more
\\n\\nDigital Archiving Policy
\\n\\nIntechOpen is committed to ensuring the long-term preservation and the availability of all scholarly research we publish. We employ a variety of means to enable us to deliver on our commitments to the scientific community. Apart from preservation by the Croatian National Library (for publications prior to April 18, 2018) and the British Library (for publications after April 18, 2018), our entire catalogue is preserved in the CLOCKSS archive.
\\n\\nOpen Science is transparent and accessible knowledge that is shared and developed through collaborative networks.
\\n\\nOpen Science is about increased rigour, accountability, and reproducibility for research. It is based on the principles of inclusion, fairness, equity, and sharing, and ultimately seeks to change the way research is done, who is involved and how it is valued. It aims to make research more open to participation, review/refutation, improvement and (re)use for the world to benefit.
\\n\\nOpen Science refers to doing traditional science with more transparency involved at various stages, for example by openly sharing code and data. It implies a growing set of practices - within different disciplines - aiming at:
\\n\\nWe aim at improving the quality and availability of scholarly communication by promoting and practicing:
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The Open Access publishing movement started in the early 2000s when academic leaders from around the world participated in the formation of the Budapest Initiative. They developed recommendations for an Open Access publishing process, “which has worked for the past decade to provide the public with unrestricted, free access to scholarly research—much of which is publicly funded. Making the research publicly available to everyone—free of charge and without most copyright and licensing restrictions—will accelerate scientific research efforts and allow authors to reach a larger number of readers” (reference: http://www.budapestopenaccessinitiative.org)
\n\nIntechOpen’s co-founders, both scientists themselves, created the company while undertaking research in robotics at Vienna University. Their goal was to spread research freely “for scientists, by scientists’ to the rest of the world via the Open Access publishing model. The company soon became a signatory of the Budapest Initiative, which currently has more than 1000 supporting organizations worldwide, ranging from universities to funders.
\n\nAt IntechOpen today, we are still as committed to working with organizations and people who care about scientific discovery, to putting the academic needs of the scientific community first, and to providing an Open Access environment where scientists can maximize their contribution to scientific advancement. By opening up access to the world’s scientific research articles and book chapters, we aim to facilitate greater opportunity for collaboration, scientific discovery and progress. We subscribe wholeheartedly to the Open Access definition:
\n\n“By “open access” to [peer-reviewed research literature], we mean its free availability on the public internet, permitting any users to read, download, copy, distribute, print, search, or link to the full texts of these articles, crawl them for indexing, pass them as data to software, or use them for any other lawful purpose, without financial, legal, or technical barriers other than those inseparable from gaining access to the internet itself. The only constraint on reproduction and distribution, and the only role for copyright in this domain, should be to give authors control over the integrity of their work and the right to be properly acknowledged and cited” (reference: http://www.budapestopenaccessinitiative.org)
\n\nOAI-PMH
\n\nAs a firm believer in the wider dissemination of knowledge, IntechOpen supports the Open Access Initiative Protocol for Metadata Harvesting (OAI-PMH Version 2.0). Read more
\n\nLicense
\n\nBook chapters published in edited volumes are distributed under the Creative Commons Attribution 3.0 Unported License (CC BY 3.0). IntechOpen upholds a very flexible Copyright Policy. There is no copyright transfer to the publisher and Authors retain exclusive copyright to their work. All Monographs/Compacts are distributed under the Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0). Read more
\n\nPeer Review Policies
\n\nAll scientific works are Peer Reviewed prior to publishing. Read more
\n\nOA Publishing Fees
\n\nThe Open Access publishing model employed by IntechOpen eliminates subscription charges and pay-per-view fees, enabling readers to access research at no cost. In order to sustain operations and keep our publications freely accessible we levy an Open Access Publishing Fee for manuscripts, which helps us cover the costs of editorial work and the production of books. Read more
\n\nDigital Archiving Policy
\n\nIntechOpen is committed to ensuring the long-term preservation and the availability of all scholarly research we publish. We employ a variety of means to enable us to deliver on our commitments to the scientific community. Apart from preservation by the Croatian National Library (for publications prior to April 18, 2018) and the British Library (for publications after April 18, 2018), our entire catalogue is preserved in the CLOCKSS archive.
\n\nOpen Science is transparent and accessible knowledge that is shared and developed through collaborative networks.
\n\nOpen Science is about increased rigour, accountability, and reproducibility for research. It is based on the principles of inclusion, fairness, equity, and sharing, and ultimately seeks to change the way research is done, who is involved and how it is valued. It aims to make research more open to participation, review/refutation, improvement and (re)use for the world to benefit.
\n\nOpen Science refers to doing traditional science with more transparency involved at various stages, for example by openly sharing code and data. It implies a growing set of practices - within different disciplines - aiming at:
\n\nWe aim at improving the quality and availability of scholarly communication by promoting and practicing:
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Many of these genes contribute to immunity. Particularly, MHC‐encoded class I and class II molecules, which are typically highly polymorphic and polygenic, are central in defining the specificity of the adaptive immune response. Among the diversity of genes associated with disease resistance, MHC genes are particularly interesting as they are associated with resistance and susceptibility to a wide range of diseases, some of which produce important economic losses in livestock. Enzootic bovine leukosis is an infectious disease caused by the retrovirus bovine leukemia virus (BLV), with an important economic impact, mainly in dairy herds. In this chapter, MHC‐associated genetic resistance to BLV is revised. Certain alleles of the bovine MHC (BoLA) class II locus have been found strongly associated with resistance to viral dissemination. Genetic selection of resistant animals emerges as a natural strategy for the control of infectious diseases, especially when there is no other alternative of control or prevention, as vaccines. Founded on this knowledge, a BLV control program based on selection of genetically resistant cattle was designed. The proof of concept indicates that this strategy is feasible to implement in dairy herds.",book:{id:"5405",slug:"trends-and-advances-in-veterinary-genetics",title:"Trends and Advances in Veterinary Genetics",fullTitle:"Trends and Advances in Veterinary Genetics"},signatures:"Silvina Elena Gutiérrez, Eduardo Néstor Esteban, Claudia María\nLützelschwab and Marcela Alicia Juliarena",authors:[{id:"188776",title:"Dr.",name:"Silvina Elena",middleName:null,surname:"Gutiérrez",slug:"silvina-elena-gutierrez",fullName:"Silvina Elena Gutiérrez"},{id:"189290",title:"Dr.",name:"Marcela Alicia",middleName:null,surname:"Juliarena",slug:"marcela-alicia-juliarena",fullName:"Marcela Alicia Juliarena"},{id:"189291",title:"Dr.",name:"Eduardo Néstor",middleName:null,surname:"Esteban",slug:"eduardo-nestor-esteban",fullName:"Eduardo Néstor Esteban"},{id:"189293",title:"Dr.",name:"Claudia María",middleName:null,surname:"Lützelschwab",slug:"claudia-maria-lutzelschwab",fullName:"Claudia María Lützelschwab"}]},{id:"52940",doi:"10.5772/65848",title:"Beyond Fifty Shades: The Genetics of Horse Colors",slug:"beyond-fifty-shades-the-genetics-of-horse-colors",totalDownloads:3218,totalCrossrefCites:2,totalDimensionsCites:4,abstract:"Since the dawn of horse domestication, coat colors have always fascinated humankind. In the last century, knowledge of genetics and development of scientific tools have become powerful enough so that the effects of many DNA mutations could be critically studied. Coat color nomenclature varies according to countries and breed associations; in addition, many factors can modify the color of the coat, such as sun exposure, age, sex, and nutritional status of the animal. Nevertheless, horses are capable of producing only two pigments. Several genes have been indicated as putative to coat color modification, altering the basic color by dilution, redistribution, or lacking of pigments.",book:{id:"5405",slug:"trends-and-advances-in-veterinary-genetics",title:"Trends and Advances in Veterinary Genetics",fullTitle:"Trends and Advances in Veterinary Genetics"},signatures:"Adriana Pires Neves, Eduardo Brum Schwengber, Fabiola Freire\nAlbrecht, José Victor Isola and Liana de Salles van der Linden",authors:[{id:"188768",title:"Associate Prof.",name:"Adriana",middleName:null,surname:"Pires Neves",slug:"adriana-pires-neves",fullName:"Adriana Pires Neves"},{id:"188993",title:"Dr.",name:"Eduardo",middleName:null,surname:"Brun Schwengber",slug:"eduardo-brun-schwengber",fullName:"Eduardo Brun Schwengber"},{id:"188994",title:"Mrs.",name:"Fabiola",middleName:null,surname:"Freire Albrecht",slug:"fabiola-freire-albrecht",fullName:"Fabiola Freire Albrecht"},{id:"188996",title:"Ph.D. Student",name:"Liana",middleName:null,surname:"de Salles van der Linden",slug:"liana-de-salles-van-der-linden",fullName:"Liana de Salles van der Linden"},{id:"188997",title:"Mr.",name:"José Victor",middleName:null,surname:"Vieira Isola",slug:"jose-victor-vieira-isola",fullName:"José Victor Vieira Isola"}]},{id:"59305",doi:"10.5772/intechopen.74008",title:"Avian Coccidiosis, New Strategies of Treatment",slug:"avian-coccidiosis-new-strategies-of-treatment",totalDownloads:3686,totalCrossrefCites:2,totalDimensionsCites:4,abstract:"The control of avian coccidiosis since the 1940s has been associated with the use of ionophores and chemical drugs. Recently, a significant interest in natural sources has developed due to the pressure to poultry industry to produce drug-free birds. Consequently, the search of products derived from plants and other natural sources has increased in the last years. Today, many commercial products containing essential oils, extracts, and other compounds are available. The use of these compounds of natural origin is related to an increased immune response, a body weight gain, destruction of oocyst, among other benefits. The main inconvenience of these products is the act on some species of Eimeria, but not all. This genetic variability found in the parasite makes the use of products difficult to control and treat coccidiosis. In this chapter, several proposals of treatment are presented based on the use of natural products, considering the new strategies of treatment with minimal consequences to birds.",book:{id:"5543",slug:"farm-animals-diseases-recent-omic-trends-and-new-strategies-of-treatment",title:"Farm Animals Diseases, Recent Omic Trends and New Strategies of Treatment",fullTitle:"Farm Animals Diseases, Recent Omic Trends and New Strategies of Treatment"},signatures:"Rosa Estela Quiroz-Castañeda",authors:[{id:"187735",title:"Dr.",name:"Rosa Estela",middleName:null,surname:"Quiroz Castañeda",slug:"rosa-estela-quiroz-castaneda",fullName:"Rosa Estela Quiroz Castañeda"}]},{id:"58461",doi:"10.5772/intechopen.72638",title:"Natural Compounds as an Alternative to Control Farm Diseases: Avian Coccidiosis",slug:"natural-compounds-as-an-alternative-to-control-farm-diseases-avian-coccidiosis",totalDownloads:2078,totalCrossrefCites:1,totalDimensionsCites:3,abstract:"Coccidiosis is one of the most aggressive and expensive parasite diseases in poultry industry worldwide. Currently, the most used control techniques are chemoprophylaxis and anticoccidial feed additives. Although there is a great variety of commercial anticoccidial drugs and vaccines in the market, there is also a significant resistance to use them in animals with human as final consumer. To date, none available product offers effective protection toward coccidiosis; however, the search for novel strategies to control this disease continues, and natural products have arisen as a potential way to cope with avian coccidiosis. In this chapter, we highlight recent advances in natural compounds, their anticoccidial properties, and mechanisms.",book:{id:"5543",slug:"farm-animals-diseases-recent-omic-trends-and-new-strategies-of-treatment",title:"Farm Animals Diseases, Recent Omic Trends and New Strategies of Treatment",fullTitle:"Farm Animals Diseases, Recent Omic Trends and New Strategies of Treatment"},signatures:"Mayra E. Cobaxin-Cárdenas",authors:[{id:"223051",title:"Dr.",name:"Mayra E.",middleName:null,surname:"Cobaxin-Cárdenas",slug:"mayra-e.-cobaxin-cardenas",fullName:"Mayra E. Cobaxin-Cárdenas"}]},{id:"58679",doi:"10.5772/intechopen.72636",title:"Genome-Based Vaccinology Applied to Bovine Babesiosis",slug:"genome-based-vaccinology-applied-to-bovine-babesiosis",totalDownloads:1161,totalCrossrefCites:1,totalDimensionsCites:3,abstract:"Genomics approaches in veterinary research have been a very useful tool to identify candidates with potential to be used in prevention of animal diseases. In Babesia, genome information analysis has elucidated a wide variety of protein families and some members are described in this chapter. Here, we present some of the most recent studies about B. bovis and B. bigemina genomes where some proteins have been identified with potential to prevent infections by these parasites.",book:{id:"5543",slug:"farm-animals-diseases-recent-omic-trends-and-new-strategies-of-treatment",title:"Farm Animals Diseases, Recent Omic Trends and New Strategies of Treatment",fullTitle:"Farm Animals Diseases, Recent Omic Trends and New Strategies of Treatment"},signatures:"Juan Mosqueda, Diego Josimar Hernández-Silva and Mario\nHidalgo-Ruiz",authors:[{id:"220191",title:"Dr.",name:"Juan",middleName:null,surname:"Mosqueda",slug:"juan-mosqueda",fullName:"Juan Mosqueda"}]}],mostDownloadedChaptersLast30Days:[{id:"59305",title:"Avian Coccidiosis, New Strategies of Treatment",slug:"avian-coccidiosis-new-strategies-of-treatment",totalDownloads:3686,totalCrossrefCites:2,totalDimensionsCites:4,abstract:"The control of avian coccidiosis since the 1940s has been associated with the use of ionophores and chemical drugs. Recently, a significant interest in natural sources has developed due to the pressure to poultry industry to produce drug-free birds. Consequently, the search of products derived from plants and other natural sources has increased in the last years. Today, many commercial products containing essential oils, extracts, and other compounds are available. The use of these compounds of natural origin is related to an increased immune response, a body weight gain, destruction of oocyst, among other benefits. The main inconvenience of these products is the act on some species of Eimeria, but not all. This genetic variability found in the parasite makes the use of products difficult to control and treat coccidiosis. In this chapter, several proposals of treatment are presented based on the use of natural products, considering the new strategies of treatment with minimal consequences to birds.",book:{id:"5543",slug:"farm-animals-diseases-recent-omic-trends-and-new-strategies-of-treatment",title:"Farm Animals Diseases, Recent Omic Trends and New Strategies of Treatment",fullTitle:"Farm Animals Diseases, Recent Omic Trends and New Strategies of Treatment"},signatures:"Rosa Estela Quiroz-Castañeda",authors:[{id:"187735",title:"Dr.",name:"Rosa Estela",middleName:null,surname:"Quiroz Castañeda",slug:"rosa-estela-quiroz-castaneda",fullName:"Rosa Estela Quiroz Castañeda"}]},{id:"58604",title:"Genomics of Apicomplexa",slug:"genomics-of-apicomplexa",totalDownloads:1181,totalCrossrefCites:2,totalDimensionsCites:2,abstract:"Apicomplexa is a eukaryotic phylum of intracellular parasites with more than 6000 species. Some of these single-celled parasites are important pathogens of livestock. At present, 128 genomes of phylum Apicomplexa have been reported in the GenBank database, of which 17 genomes belong to five genera that are pathogens of farm animals: Babesia, Theileria, Eimeria, Neospora and Sarcocystis. These 17 genomes are Babesia bigemina (five chromosomes), Babesia divergens (514 contigs) and Babesia bovis (four chromosomes and one apicoplast); Theileria parva (four chromosomes and one apicoplast), Theileria annulata (four chromosomes), Theileria orientalis (four chromosomes and one apicoplast) and Theileria equi (four chromosomes and one apicoplast); Eimeria brunetti (24,647 contigs), Eimeria necatrix (4667 contigs), Eimeria tenella (12,727 contigs), Eimeria acervulina (4947 contigs), Eimeria maxima (4570 contigs), Eimeria mitis (65,610 contigs) and Eimeria praecox (53,359 contigs); Neospora caninum (14 chromosomes); and Sarcocystis neurona strains SN1 (2862 contigs) and SN3 (3191 contigs). The study of these genomes allows us to understand their mechanisms of pathogenicity and identify genes that encode proteins as a possible vaccine antigen.",book:{id:"5543",slug:"farm-animals-diseases-recent-omic-trends-and-new-strategies-of-treatment",title:"Farm Animals Diseases, Recent Omic Trends and New Strategies of Treatment",fullTitle:"Farm Animals Diseases, Recent Omic Trends and New Strategies of Treatment"},signatures:"Fernando Martínez-Ocampo",authors:[{id:"195818",title:"Dr.",name:"Fernando",middleName:null,surname:"Martinez",slug:"fernando-martinez",fullName:"Fernando Martinez"}]},{id:"59436",title:"Pathogenomics and Molecular Advances in Pathogen Identification",slug:"pathogenomics-and-molecular-advances-in-pathogen-identification",totalDownloads:1642,totalCrossrefCites:2,totalDimensionsCites:2,abstract:"Today exists a spread spectrum of tools to be used in pathogen identification. Traditional staining and microscopic methods as well as modern molecular methods are presented in this chapter. Pathogen identification is only the beginning to obtain information related to pathogenicity of the microorganism in the near future. Once the pathogen is identified, genome-sequencing methods will provide a significant amount of information that can be elucidated only through bioinformatics methods. In this point, pathogenomics is a powerful tool to identify potential virulence factors, pathogenicity islands, and many other genes that could be used as therapeutic targets or in vaccine development. In this chapter, we present an update of the molecular advances used to identify pathogens and to obtain information of their diversity. We also review the most recent studies on pathogenomics with a special attention on pathogens of veterinary importance.",book:{id:"5543",slug:"farm-animals-diseases-recent-omic-trends-and-new-strategies-of-treatment",title:"Farm Animals Diseases, Recent Omic Trends and New Strategies of Treatment",fullTitle:"Farm Animals Diseases, Recent Omic Trends and New Strategies of Treatment"},signatures:"Rosa Estela Quiroz-Castañeda",authors:[{id:"187735",title:"Dr.",name:"Rosa Estela",middleName:null,surname:"Quiroz Castañeda",slug:"rosa-estela-quiroz-castaneda",fullName:"Rosa Estela Quiroz Castañeda"}]},{id:"61222",title:"The Use of Genetically Modified Organisms for Repopulation of Species of Commercial Importance in Aquatic Environment: Effects on Genetic Pool, Risks to Protected Areas and Policies for Their Proper Management",slug:"the-use-of-genetically-modified-organisms-for-repopulation-of-species-of-commercial-importance-in-aq",totalDownloads:1073,totalCrossrefCites:1,totalDimensionsCites:1,abstract:"In recent years, the reproduction of organisms through genetic engineering has been presented as an option for the repopulation of fish stocks of species that are at the limit or have passed their maximum sustainable exploitation. However, are the potential effects on genetic diversity known? The possible mutations? The risks to protected ecosystems? or Are there adequate policies and regulations for its management? This chapter aims to review the biological and population effects of the use of these organisms and the potential impacts they can cause to natural protected areas, as well as if there are adequate regulations or policies for their use. Finally, the authors give indicators for the sustainable integrated management of genetically modified organisms.",book:{id:"6647",slug:"animal-genetics-approaches-and-limitations",title:"Animal Genetics",fullTitle:"Animal Genetics - Approaches and Limitations"},signatures:"Maurilio Lara-Flores and Evelia Rivera-Arriaga",authors:null},{id:"58730",title:"Metagenomics and Diagnosis of Zoonotic Diseases",slug:"metagenomics-and-diagnosis-of-zoonotic-diseases",totalDownloads:1800,totalCrossrefCites:0,totalDimensionsCites:0,abstract:"Zoonotic diseases represent a public health problem worldwide, since approximately 60% of human pathogens have a zoonotic origin. A variety of methodologies have been developed to diagnose zoonosis, including culture-dependent and immunological-based methods, which allow the identification of a huge range of pathogens. However, some of them are not detected easily with these approaches. Additionally, molecular tests have been developed, and they are designed to identify a single pathogen or mixtures of them. In this context, metagenomics comes as an alternative to get genome sequences of different microorganisms, which comprise a microbial community. Metagenomics have been used to characterize microbiomes and viromes, which are not cultivable under laboratory conditions. This methodology could be a powerful tool in the diagnosis of zoonotic diseases because it allows not only identification of genus and species, but also detection of some proteins in specific conditions on specific tissues, through structural and functional metagenomics, respectively.",book:{id:"5543",slug:"farm-animals-diseases-recent-omic-trends-and-new-strategies-of-treatment",title:"Farm Animals Diseases, Recent Omic Trends and New Strategies of Treatment",fullTitle:"Farm Animals Diseases, Recent Omic Trends and New Strategies of Treatment"},signatures:"Laura Inés Cuervo-Soto, Silvio Alejandro López-Pazos and Ramón\nAlberto Batista-García",authors:[{id:"201362",title:"Dr.",name:"Ramón Alberto",middleName:null,surname:"Batista-García",slug:"ramon-alberto-batista-garcia",fullName:"Ramón Alberto Batista-García"}]}],onlineFirstChaptersFilter:{topicId:"303",limit:6,offset:0},onlineFirstChaptersCollection:[],onlineFirstChaptersTotal:0},preDownload:{success:null,errors:{}},subscriptionForm:{success:null,errors:{}},aboutIntechopen:{},privacyPolicy:{},peerReviewing:{},howOpenAccessPublishingWithIntechopenWorks:{},sponsorshipBooks:{sponsorshipBooks:[],offset:0,limit:8,total:null},allSeries:{pteSeriesList:[],lsSeriesList:[],hsSeriesList:[],sshSeriesList:[],testimonialsList:[]},series:{item:{id:"11",title:"Biochemistry",doi:"10.5772/intechopen.72877",issn:"2632-0983",scope:"Biochemistry, the study of chemical transformations occurring within living organisms, impacts all areas of life sciences, from molecular crystallography and genetics to ecology, medicine, and population biology. Biochemistry examines macromolecules - proteins, nucleic acids, carbohydrates, and lipids – and their building blocks, structures, functions, and interactions. Much of biochemistry is devoted to enzymes, proteins that catalyze chemical reactions, enzyme structures, mechanisms of action and their roles within cells. Biochemistry also studies small signaling molecules, coenzymes, inhibitors, vitamins, and hormones, which play roles in life processes. Biochemical experimentation, besides coopting classical chemistry methods, e.g., chromatography, adopted new techniques, e.g., X-ray diffraction, electron microscopy, NMR, radioisotopes, and developed sophisticated microbial genetic tools, e.g., auxotroph mutants and their revertants, fermentation, etc. More recently, biochemistry embraced the ‘big data’ omics systems. Initial biochemical studies have been exclusively analytic: dissecting, purifying, and examining individual components of a biological system; in the apt words of Efraim Racker (1913 –1991), “Don’t waste clean thinking on dirty enzymes.” Today, however, biochemistry is becoming more agglomerative and comprehensive, setting out to integrate and describe entirely particular biological systems. The ‘big data’ metabolomics can define the complement of small molecules, e.g., in a soil or biofilm sample; proteomics can distinguish all the comprising proteins, e.g., serum; metagenomics can identify all the genes in a complex environment, e.g., the bovine rumen. This Biochemistry Series will address the current research on biomolecules and the emerging trends with great promise.",coverUrl:"https://cdn.intechopen.com/series/covers/11.jpg",latestPublicationDate:"June 29th, 2022",hasOnlineFirst:!0,numberOfPublishedBooks:32,editor:{id:"31610",title:"Dr.",name:"Miroslav",middleName:null,surname:"Blumenberg",slug:"miroslav-blumenberg",fullName:"Miroslav Blumenberg",profilePictureURL:"https://mts.intechopen.com/storage/users/31610/images/system/31610.jpg",biography:"Miroslav Blumenberg, Ph.D., was born in Subotica and received his BSc in Belgrade, Yugoslavia. He completed his Ph.D. at MIT in Organic Chemistry; he followed up his Ph.D. with two postdoctoral study periods at Stanford University. Since 1983, he has been a faculty member of the RO Perelman Department of Dermatology, NYU School of Medicine, where he is codirector of a training grant in cutaneous biology. Dr. Blumenberg’s research is focused on the epidermis, expression of keratin genes, transcription profiling, keratinocyte differentiation, inflammatory diseases and cancers, and most recently the effects of the microbiome on the skin. He has published more than 100 peer-reviewed research articles and graduated numerous Ph.D. and postdoctoral students.",institutionString:null,institution:{name:"New York University Langone Medical Center",institutionURL:null,country:{name:"United States of America"}}},editorTwo:null,editorThree:null},subseries:{paginationCount:4,paginationItems:[{id:"38",title:"Pollution",coverUrl:"https://cdn.intechopen.com/series_topics/covers/38.jpg",isOpenForSubmission:!0,editor:{id:"110740",title:"Dr.",name:"Ismail M.M.",middleName:null,surname:"Rahman",slug:"ismail-m.m.-rahman",fullName:"Ismail M.M. Rahman",profilePictureURL:"https://mts.intechopen.com/storage/users/110740/images/2319_n.jpg",biography:"Ismail Md. Mofizur Rahman (Ismail M. M. Rahman) assumed his current responsibilities as an Associate Professor at the Institute of Environmental Radioactivity, Fukushima University, Japan, in Oct 2015. He also has an honorary appointment to serve as a Collaborative Professor at Kanazawa University, Japan, from Mar 2015 to the present. \nFormerly, Dr. Rahman was a faculty member of the University of Chittagong, Bangladesh, affiliated with the Department of Chemistry (Oct 2002 to Mar 2012) and the Department of Applied Chemistry and Chemical Engineering (Mar 2012 to Sep 2015). Dr. Rahman was also adjunctly attached with Kanazawa University, Japan (Visiting Research Professor, Dec 2014 to Mar 2015; JSPS Postdoctoral Research Fellow, Apr 2012 to Mar 2014), and Tokyo Institute of Technology, Japan (TokyoTech-UNESCO Research Fellow, Oct 2004–Sep 2005). \nHe received his Ph.D. degree in Environmental Analytical Chemistry from Kanazawa University, Japan (2011). He also achieved a Diploma in Environment from the Tokyo Institute of Technology, Japan (2005). Besides, he has an M.Sc. degree in Applied Chemistry and a B.Sc. degree in Chemistry, all from the University of Chittagong, Bangladesh. \nDr. Rahman’s research interest includes the study of the fate and behavior of environmental pollutants in the biosphere; design of low energy and low burden environmental improvement (remediation) technology; implementation of sustainable waste management practices for treatment, handling, reuse, and ultimate residual disposition of solid wastes; nature and type of interactions in organic liquid mixtures for process engineering design applications.",institutionString:null,institution:{name:"Fukushima University",institutionURL:null,country:{name:"Japan"}}},editorTwo:{id:"201020",title:"Dr.",name:"Zinnat Ara",middleName:null,surname:"Begum",slug:"zinnat-ara-begum",fullName:"Zinnat Ara Begum",profilePictureURL:"https://mts.intechopen.com/storage/users/201020/images/system/201020.jpeg",biography:"Zinnat A. 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The research focus of Dr. Zinnat includes the effect of the relative stability of metal-chelator complexes in the environmental remediation process designs and the development of eco-friendly soil washing techniques using biodegradable chelators.",institutionString:null,institution:{name:"Fukushima University",institutionURL:null,country:{name:"Japan"}}},editorThree:null},{id:"39",title:"Environmental Resilience and Management",coverUrl:"https://cdn.intechopen.com/series_topics/covers/39.jpg",isOpenForSubmission:!0,editor:{id:"137040",title:"Prof.",name:"Jose",middleName:null,surname:"Navarro-Pedreño",slug:"jose-navarro-pedreno",fullName:"Jose Navarro-Pedreño",profilePictureURL:"https://s3.us-east-1.amazonaws.com/intech-files/0030O00002bRAXrQAO/Profile_Picture_2022-03-09T15:50:19.jpg",biography:"Full professor at University Miguel Hernández of Elche, Spain, previously working at the University of Alicante, Autonomous University of Madrid and Polytechnic University of Valencia. Graduate in Sciences (Chemist), graduate in Geography and History (Geography), master in Water Management, Treatment, master in Fertilizers and Environment and master in Environmental Management; Ph.D. in Environmental Sciences. His research is focused on soil-water and waste-environment relations, mainly on soil-water and soil-waste interactions under different management and waste reuse. His work is reflected in more than 230 communications presented in national and international conferences and congresses, 29 invited lectures from universities, associations and government agencies. Prof. Navarro-Pedreño is also a director of the Ph.D. Program Environment and Sustainability (2012-present) and a member of several societies among which are the Spanish Society of Soil Science, International Union of Soil Sciences, European Society for Soil Conservation, DessertNet and the Spanish Royal Society of Chemistry.",institutionString:"Miguel Hernández University of Elche, Spain",institution:null},editorTwo:null,editorThree:null},{id:"40",title:"Ecosystems and Biodiversity",coverUrl:"https://cdn.intechopen.com/series_topics/covers/40.jpg",isOpenForSubmission:!0,editor:{id:"209149",title:"Prof.",name:"Salustiano",middleName:null,surname:"Mato",slug:"salustiano-mato",fullName:"Salustiano Mato",profilePictureURL:"https://s3.us-east-1.amazonaws.com/intech-files/0030O00002bRLREQA4/Profile_Picture_2022-03-31T10:23:50.png",biography:"Salustiano Mato de la Iglesia (Santiago de Compostela, 1960) is a doctor in biology from the University of Santiago and a Professor of zoology at the Department of Ecology and Animal Biology at the University of Vigo. He has developed his research activity in the fields of fauna and soil ecology, and in the treatment of organic waste, having been the founder and principal investigator of the Environmental Biotechnology Group of the University of Vigo.\r\nHis research activity in the field of Environmental Biotechnology has been focused on the development of novel organic waste treatment systems through composting. 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His research activity is linked to the taxonomy, fauna and ecology of marine benthic invertebrates and especially the Cnidarian group. Since 2004, he has been part of the EcoAfrik project, aimed at the study, protection and conservation of biodiversity and benthic habitats in West Africa. He also participated in the study of vulnerable marine ecosystems associated with seamounts in the South Atlantic and is involved in training young African researchers in the field of marine research.",institutionString:null,institution:{name:"University of Vigo",institutionURL:null,country:{name:"Spain"}}}},{id:"41",title:"Water Science",coverUrl:"https://cdn.intechopen.com/series_topics/covers/41.jpg",isOpenForSubmission:!0,editor:{id:"349630",title:"Dr.",name:"Yizi",middleName:null,surname:"Shang",slug:"yizi-shang",fullName:"Yizi Shang",profilePictureURL:"https://mts.intechopen.com/storage/users/349630/images/system/349630.jpg",biography:"Prof. Dr. Yizi Shang is a pioneering researcher in hydrology and water resources who has devoted his research career to promoting the conservation and protection of water resources for sustainable development. He is presently associate editor of Water International (official journal of the International Water Resources Association). He was also invited to serve as an associate editor for special issues of the Journal of the American Water Resources Association. He has served as an editorial member for international journals such as Hydrology, Journal of Ecology & Natural Resources, and Hydro Science & Marine Engineering, among others. He has chaired or acted as a technical committee member for twenty-five international forums (conferences). Dr. Shang graduated from Tsinghua University, China, in 2010 with a Ph.D. in Engineering. Prior to that, he worked as a research fellow at Harvard University from 2008 to 2009. 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He received his Ph.D. in Environmental Analytical Chemistry from Assiut University, Egypt, in 1989. His research interest is in analytical and environmental chemistry with special emphasis on: (1) monitoring and assessing biological trace elements and toxic metals in human blood, urine, water, crops, vegetables, and medicinal plants; (2) relationships between environmental heavy metals and human diseases; (3) uses of biological indicators for monitoring water pollution; (4) environmental chemistry of lakes, rivers, and well water; (5) water and wastewater treatment by adsorption and photocatalysis techniques; (6) soil and water pollution monitoring, control, and treatment; and (7) advanced oxidation treatment. Prof. Rashed has supervised several MSc and Ph.D. theses in the field of analytical and environmental chemistry. He served as an examiner for several Ph.D. theses in analytical chemistry in India, Kazakhstan, and Botswana. He has published about ninety scientific papers in peer-reviewed international journals and several papers in national and international conferences. He participated as an invited speaker at thirty international conferences. Prof. Rashed is the editor-in-chief and an editorial board member for several international journals in the fields of chemistry and environment. He is a member of several national and international societies. He received the Egyptian State Award for Environmental Research in 2001 and the Aswan University Merit Award for Basic Science in 2020. 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