1. Introduction
Ice crystal formation of water plays a very important role in broadest scientific and engineering fields such as cloud evolution in atmosphere and brine pockets in marine ice. One of the most attractive attentions of this issue is about the mechanisms of cell injury induced by freezing in cryobiology [1]. During the past few decades, a series of cryogenic techniques have been developed for clinical applications in cryosurgery and cryopreservation. The former is aimed to destroy the target diseased tissues (such as tumor) while minimize pain and bleeding of the tissue as much as possible. It has been demonstrated to be a safe, minimally invasive and cost-effective treatment approach. In contrast to the cryosurgery, the task of cryopreservation is however to preserve cell, tissues or organs at a super-low temperature condition with the addition of protective agents, and ensure that they can be normally used after several re-warming stages. Clearly, no matter which process it involves, the formation of the ice crystal is ineluctable and decisive to the final fate of those cells and tissues subject to treatment.
Cryoinjury induced by ice formation is usually considered as a main killer of cells during cryosurgery or cryopreservation. A two-factor hypothesis [2], “intracellular ice formation” (IIF) at rapid cooling rates and “solution effects” at slow cooling rates, proposed by Mazur, has been serving well to explain the mechanism of freeze injury. The biological materials would subject to damage due to extracellular and intracellular ice formation during freezing. For the cryopreservation at super-cooling temperature, the occurrence of IIF is the single most important factor determining whether or not cells will survive cryopreservation [3]. So far, the ice crystal formation problems have been partially addressed in material and atmospheric sciences. However, similar researches are hard to find in cryobiology area due to complexity of the water structure in a biological system. This chapter is dedicated to summarize the typical physical and mathematical model for ice nucleation and growth in cryobiology area. In addition, the heat and solute transport, and interaction between the cell and ice during freezing are also discussed.
2. Ice nucleation
Freezing often denotes a process of new phase defined by ice creation via nucleation and subsequent crystal growth from supercooled water. This process undergoes three stages including the chemical diffusion stage for water molecule transportation, the surface kinetic stage for hydrogen bonds formation, and the final heat conduction stage for heat releasing and diffusing. It implies that the ice nucleation—whose formation determines the growth of ice crystal to a large extent—turns out to be the initial and crucial step during crystallization. In terms of whether there exist foreign bodies or not, the nucleation is usually classified as homogeneous or heterogeneous cases. By definition, homogeneous ice nucleation requests a severe condition that the liquid water is absolutely dust-free, or there exist foreign particles indeed, but whose sizes are small enough to be negligible. Since this rigid demand is hard to be satisfied, the nucleation is in fact regarded as heterogeneous in most cases and may be influenced by many external factors, such as the size of foreign particles, surface roughness and the effective size of the nucleators at different supercoolings. There exist a great many barriers to build up an integrated theory on nucleation, because of the dissimilar properties might exhibit between bulk fluid and the micro/nanoscale molecules. Up to now, the two major theoretical approaches to characterize the formation of ice can be classified as thermodynamic approximation and molecular simulations [4].
2.1. Thermodynamic model of ice nucleation
The ice nucleation does not happen necessarily if only temperature is below the freezing point. This process is determined by the free energy of system, which implies that the ice germ growth or disappearance depends on the free energy decrease or increase. For constant rate cooling protocols, the temperature of system is given by
where
where
where
where
where
The homogeneous nucleation rate
where
2.2. Diffusion limited model of ice growth inside cell
Karlssonet al. [6] has developed a physiochemical theory of ice growth inside biological cells by coupling the water transport models, theory of ice nucleation, and theory of crystal growth. Considering a given cell with the control volume of
where int denote the nearest integer truncated from the ensemble average. When the crystallizing phase is of different composition than the bulk solution, such as the case with ice crystallization from aqueous solutions, the rate of crystal growth is believed to be limited by the diffusion water molecules to the ice-solution interface. Considering a spherically symmetric ice crystal under isothermal conditions, its radius at time t could be given as [6]
where
Thus the crystallized volume fraction considering the impingement appearance could be given as
According the water-transport model developed by Mazur [7] to cells containing a ternary water-NaCl-glycerol solution, one could derive the time evolution of cell volume
where
2.3. Molecular simulation of ice nucleation
Molecular dynamics (MD) is a powerful computer simulation technique to track time evolution of a system of interacting particles, such as atoms, molecules and coarse-grained particles. It has been widely used in the study of the structure, dynamics, and thermodynamics of water phase change and their complexes addressing a variety of issues including ice nucleation. The basic idea of the MD simulations is to generate the atomic trajectories of a system of finite particles by numerical integration, of a set of Newton’s equations of motion for all particles in the system with certain given boundary conditions, an initial set of positions and velocities. In addition, the potential energy of the particles system needs to be specified in order to describe the interaction between atoms or molecules. The detailed potential energy expression and its parameter are derived from both experimental work and high-level quantum mechanical calculations.
The dynamics of the ice–water interface determines the ice nucleation and growth such that considerable MD methods have been developed. Karim and Haymet [11, 12] have used the TIP4P water model to simulate the contact of the basal plane of ice with water and investigate dynamics of the ice–water interface. Their results show that the interface was found to be stable at 240 K. In addition, there appears a gradual change in the orientation and mobility of the molecules in the interfacial region. A very extensive MD simulation by Matsumoto et al. [13] predicted the freezing of pure water at different supercooling. They found that the occurrence of the ice nucleation was impressed extensively by the number of spontaneously developing long-lived hydrogen bonds at the same location. Handel et al. [14] had performed direct calculations of the ice Ih-water interfacial free energy for the TIP4P model by extending the cleaving method to molecular systems, which agrees with the experiments results.
MD simulations also could be used to investigate the effects of salt on ice nucleation, which is more close to biological environments. Smith et al. [15] had studied the potential of mean force of single ions as a function of the distance from the ice-water interface, and the free energy of transfer of
The mechanism of ice growth inhibition by antifreeze proteins (AFP) is still poorly understood, owing to the difficulty in elucidating the molecular-scale structure of an ice–water interface, and in experimentally observing the structure and dynamics of AFP at an ice–water interface. MD is one of most popular methods that currently have the potential to clarify the mechanism of ice growth inhibition by AFP at the molecular level [18-21]. Wathen et al. [19] developed a MD which combines molecular representation and detailed energetics calculations of molecular mechanics techniques with the less-sophisticated probabilistic approach to study systems containing millions of water molecules undergoing billions of interactions. Such model could enable the 3-D shape and surface properties of the molecules to directly affect crystal formation. They have applied this technique to study the inhibitory effects of antifreeze proteins (AFPs) (from both fish and insect) on ice-crystal formation, including the replication of ice-etching patterns, ice-growth inhibition, and specific AFP-induced ice morphologies. Their work suggests that the degree of AFP activity results more from AFP ice-binding orientation than from AFP ice-binding strength. The simulation results were consistent with experimental observations very well. The effects of cryoprotectants such as ethylene glycol and glycerol solutions on ice nucleation have also been investigated [22, 23].
The electrostatic field was recently proposed to improve the output of a cryopreservation process [24-26]. As the molecular dynamics simulated [27], a DC field with magnitude of
3. Ice crystal growth using phase field method
To better understand the detailed events in cell damage due to extracellular and intracellular ice formation during freezing, it is rather important to model and predict the micro-scale ice crystal formation and growth behavior, and thus characterize the effects of several core factors, such as undercooling, anisotropy, thermal noise, and external electric field etc. Among various ways ever developed, the phase field method is rather flexible in characterizing the crystal formation and has been extensively adopted to model solidification process in material science [29]. Recently some authors [30, 31] begun to pay attention to possible application of this method in cryopreservation. He and Liu [32] extended deeply this theoretical strategy to characterize the ice crystal growth under electrostatic field and describe multiple ice nucleuses’ competitive growth behavior.
A dimensionless phase field model [33] is adopted to characterize the ice growth. A non-conserved phase field
where
In the above equations, the term
where
3.1. Ice crystal growth from pure water
The physical properties of pure water [30] used in the simulation are listed as:
An explicit time-differencing scheme is adopted to solve

Figure 1.
Micro-scale dendritic ice crystal patterns with (a) 4-fold structures without thermal noise, (b) 6-fold structures with thermal noise, (c) two seeds and (d) four seeds competitive growth. The parameters
Simulations indicate that the influence of surface tension anisotropy on the shape of ice is more evident compared with that on the growth rate. The variation of the anisotropy strength does not significantly change the velocity at the dendritic tip, which is strongly affected by the local cooling strength. Four-fold and six-fold dendritic ice crystals are often observed in experiments. Fig. 1(a) shows a four-fold dendritic ice crystal evolving from an initial circle shaped seed [32]. The thermal noise, which often induces the temperature fluctuation on the interface, is considered as the main reason of sidebranching growth [34]. A six-fold dendritic ice with sidebranching is shown in Fig. 1(b). It is necessary to consider the influence of the other crystal seeds on the ice growth. Fig. 1(c), (d) represent two seeds and four seeds competitive growth, which results in the crease of growth for both collided dendrites and preferred growth in directions of unhindered grains.
3.2. The effects of external electric on Ice crystal growth
The growth rate depends on the dynamical state of the ice-water interface, such as the surface tension and the temperature at interface. In addition, the effects of the external electric field on the ice formation have been demonstrated in both theoretical and experimental research. The influence of low electrostatic field strength on water nucleation and ice growth may be attributed to dipole polarization of the water molecules by the electrostatic field. Under the electrostatic field, the phase transition must overcome excess energy
From the above dissection, the effects of electrostatic field with low magnitude can induce change of the surface tension with the form

Figure 2.
The influence of electric field on ice crystal growth at (a)
Under the electrostatic field, the growth of dendritic ice crystals represents asymmetry behavior. Fig 2 shows that the main branches parallel to the electrostatic field grow faster than the other branches [32]. One can also find that the growth of sidebranching is strengthened along the direction of electric field and weakened along the inverse direction. The above influence becomes clearer by increasing the value of
It is noteworthy that the biological media is saline solution including various ions, such as
4. The interaction between ice growths with cell
The interaction between the cell and ice during freezing is very important to investigate the cell cryoinjury during freezing. However, it is still a rather difficult task to track the evolution of the solidification front and characterize the interaction between the cell membrane and ice in detail. Recently, the progress [35, 36] gave some promising research directions to solve this issue.
Mao et al. [35] developed a sharp interface method to simulate the response of a biological cell during freezing. The cell is modeled as an aqueous salt solution surrounded by a semi-permeable membrane. The concentration and temperature fields both inside and outside a single cell are computed taking into account heat transfer, mass diffusion, membrane transport, and evolution of the solidification front. The external ice front is computed for both stable and unstable growth modes. It is shown that for the particular geometry chosen in this study, the instabilities on the front and the diffusional transport have only modest effects on the cell response. For the cooling conditions, solute and cell property parameters used, the low Peclet regime applies. The computational results are therefore validated against the conventional membrane-limited transport (Mazur) model. Good agreement of the simulation results with the Mazur model are obtained for a wide range of cooling rates and membrane permeabilities. A spatially non-isothermal situation is also considered and shown to yield significant differences in the cell response in comparison to the isothermal case.
Another important process is from Chang et al. [36]. They developed a modified level set method for modeling the interaction of biological cells with ice front during a directional solidification. The simulation result has shown that different types of cell interaction with the ice interface can lead to significant differences in the final volume of individual cells. The cell is easily exposed to high concentrations of electrolytes in the interdendritic regions due to cell entrapment. Cell pushing can be used to control the dehydration of the cell more easily, which avoids exposing the cell to high concentrations that develop in the interdendritic spaces. Cell engulfment protects the cell from high concentration regions and leaves the cell vulnerable to intracellular ice formation. However, it could be used to control the dehydration of the cell and provide limited interaction with high electrolyte concentrations through combination of cell pushing and cell engulfment. The numerical results also indicate that the interactions between cells are very important for cryopreservation conditions, where suspensions have higher volume fractions of cells. Level set method could deal with the interaction of clusters of cells with ice by assuming that the clusters act like a single particle with a radius that represents the overall size of the cell cluster. Increasing the radius of the representative particle would increase the probability of engulfment and pushing by the interface. Although the intermolecular forces between cells and the fluid flow around various arrays of single cells and cell clusters have not been included in the current model, these phenomena could be easily included in the simulations in order to study their effects on the partitioning of cells by the ice interface.
5. Summary
The present chapter has presented an overview on the theoretical modeling of the microscale phase change of biological system subject to freezing with special focus on the ice crystal formation and growth. In addition, the heat and solute transport, and interaction between the cell and ice during freezing have also been discussed. Although considerable investigation focus on ice crystal formation and its growth, there still exists some outstanding questions [37-40] including ice structure and ice phase diagram. Here we discuss some important issues and challenges about ice formation in biological system in brief. Firstly, the effects of cell membrane on ice nucleation and growth inside a cell with restricted space during freezing have not been investigated deeply, which is in fact very important to clarify the puzzle about the ice propagation between cells. In addition, the improved understanding on the effects of cell–cell interactions suggested that the mechanism of ice propagation should be mediated to some extent, but not at all, by the gap junction, if uncontrolled factors are eliminated. Secondly, a detailed three dimensional model needs to be developed to characterize the complicated freezing process that coupling micro heat and mass transfer, and ice nucleation and growth, which involves the moving water-ice interface and deformed cell membrane. Thirdly, the advanced experimental measures need to be designed to determine the parameter in the physical model and confirm the model validity. All the efforts will warrant a bright future for better understanding and practice of cryobiology.
Acknowledgments
This work is supported by the NSFC under Grant No. 51006114 & 81071255, the Specialized Research Fund for the Doctoral Program of Higher Education, and Research Fund from Tsinghua University under Grant 523003001.References
- 1.
Bischof JC: Quantitative Measurement and Prediction of Biophysical Response During Freezing in Tissues. Annual Review of Biomedical Engineering 2000, 2:257-288. - 2.
Mazur P, Leibo SP, Chu EH: A Two-factor Hypothesis of Freezing Injury. Evidence from Chinese Hamster Tissue-culture Cells. Exp Cell Res 1972, 71:345-355. - 3.
Mazur P, Seki S, Pinn IL, Kleinhans FW, Edashige K: Extra- and Intracellular Ice Formation in Mouse Oocytes. Cryobiology 2005, 51:29-53. - 4.
Li FF, Liu J: Characterization of Micro-/Nano-Scale Ice Crystal Formation in Cryo-Biomedical Engineering: A Review. Journal of Computational and Theoretical Nanoscience 2010, 7:85-96. - 5.
Toner M, Cravalho EG, Karel M: Thermodynamics and Kinetics of Intracellular Ice Formation during Freezing of Biological Cells. Journal of Applied Physics 1990, 67:1582-1593. - 6.
Karlsson JOM, Cravalho EG, Toner M: A Model of Diffusion-Limited Ice Growth inside Biological Cells during Freezing. Journal of Applied Physics 1994, 75:4442-4445. - 7.
Mazur P: Kinetics of Water Loss from Cells at Subzero Temperatures and Likelihood of Intracellular Freezing. Journal of General Physiology 1963, 47:347-369. - 8.
Zhao G, Luo DW, Gao DY: Universal Model for Intracellular Ice Formation and Its Growth. AICHE Journal 2006, 52:2596-2606. - 9.
Yang G, Zhang AL, Xu LX, He XM: Modeling the Cell-type Dependence of Diffusion-limited Intracellular Ice Nucleation and Growth During both Vitrification and Slow Freezing. Journal of Applied Physics 2009, 105:114701-114711. - 10.
Yan JF, Liu J: Characterization of the Nanocryosurgical Freezing Process through Modifying Mazur's Model. Journal of Applied Physics 2008, 103: 084311- 084321. - 11.
Karim OA, Haymet ADJ: The Ice Water Interface - a Molecular-Dynamics Simulation Study. Journal of Chemical Physics 1988, 89:6889-6896. - 12.
Karim OA, Haymet ADJ: The Ice Water Interface. Chemical Physics Letters 1987, 138:531-534. - 13.
Matsumoto M, Saito S, Ohmine I: Molecular Dynamics Simulation of the Ice Nucleation and Growth Process Leading to Water Freezing. Nature 2002, 416:409-413. - 14.
Handel R, Davidchack RL, Anwar J, Brukhno A: Direct Calculation of Solid-liquid Interfacial Free Energy for Molecular Systems: TIP4P Ice-water Interface. Physical Review Letters 2008, 100:036104-036107. - 15.
Smith EJ, Bryk T, Haymet ADJ: Free Energy of Solvation of Simple Ions: Molecular-dynamics Study of Solvation of Cl- and Na+ in the Ice/water Interface. Journal of Chemical Physics 2005, 123:03470601-03470616. - 16.
Vrbka L, Jungwirth P: Brine Rejection from Freezing Salt Solutions: A Molecular Dynamics Study. Physical Review Letters 2005, 95:148501-148504. - 17.
Carignano MA, Shepson PB, Szleifer I: Ions at the Ice/vapor Interface. Chemical Physics Letters 2007, 436:99-103. - 18.
Nada H, Furukawa Y: Growth Inhibition at the Ice Prismatic Plane Induced by a Spruce Budworm Antifreeze Protein: A Molecular Dynamics Simulation Study. Physical Chemistry Chemical Physics 2011, 13:19936-19942. - 19.
Wathen B, Kuiper M, Walker V, Jia ZC: A New Model for Simulating 3-D Crystal Growth and Its Application to the Study of Antifreeze Proteins. Journal of the American Chemical Society 2003, 125:729-737. - 20.
Yang C, Sharp KA: The Mechanism of the Type III Antifreeze Protein Action: A Computational Study. Biophysical Chemistry 2004, 109:137-148. - 21.
Nada H, Furukawa Y: Growth Inhibition Mechanism of An Ice-water Interface by A Mutant of Winter Flounder Antifreeze Protein: A Molecular Dynamics Study. Journal of Physical Chemistry B 2008, 112:7111-7119. - 22.
Chen C, Li WZ, Song YC, Yang J: Molecular Dynamics Simulation Studies of Cryoprotective Agent Solutions: The Relation Between Melting Temperature and the Ratio of Hydrogen Bonding Acceptor to Donor Number. Molecular Physics 2009, 107:673-684. - 23.
Chen C, Li WZ, Song YC, Yang J: A Molecular Dynamics Study of Cryoprotective Agent - Water-sodium Chloride Ternary Solutions. Journal of Molecular Structure-Theochem 2009, 916:37-46. - 24.
Tao LR: Microscopic Experimental Study of the Freezing Process in Aqueous Solution. Ph.D. Thesis, University of Shanghai for Science and Technology, 2000. - 25.
Sun W, Xu XB, Zhang H, Xu CX: Effects of Dipole Polarization of Water Molecules on Ice Formation under An Electrostatic Field. Cryobiology 2008, 56:93-99. - 26.
Petersen A, Schneider H, Rau G, Glasmacher B: A New Approach for Freezing of Aqueous Solutions under Active Control of the Nucleation Temperature. Cryobiology 2006, 53:248-257. - 27.
Svishchev IM, Kusalik PG: Crystallization of Liquid Water in a Molecular-Dynamics Simulation. Physical Review Letters 1994, 73:975-978. - 28.
Braslavsky I, Lipson SG: Electrofreezing Effect and Nucleation of Ice Crystals in Free Growth Experiments. Applied Physics Letters 1998, 72:264-266. - 29.
Boettinger WJ, Warren JA, Beckermann C, Karma A: Phase-field Simulation of Solidification. Annual Review of Materials Research 2002, 32:163-194. - 30.
Li FF, Liu J, Yue K: Numerical Simulation on Ice Crystal Formulation in Cellular Level Based on Phase Field Theory. Chinese Journal of Low Temperature Physics 2008, 30:84-92. - 31.
Xu Y, Mcdonough JM, Tagavi KA, Gao DY: Two-Dimensional Phase-Field Model Applied to Freezing into Supercooled Melt. Cell Preservation Technology 2004, 2:113-124. - 32.
He ZZ, Liu J: Characterizing Ice Crystal Growth Behavior Under Electric Field Using Phase Field Method. ASME Journal of Biomechanical Engineering 2009, 131: 0745021-0745023. - 33.
Wang SL, Sekerka RF, Wheeler AA, Murray BT, Coriell SR, Braun RJ, Mcfadden GB: Thermodynamically-Consistent Phase-Field Models for Solidification. Physica D 1993, 69:189-200. - 34.
Karma A, Rappel WJ: Phase-field Model of Dendritic Sidebranching with Thermal Noise. Physical Review E 1999, 60:3614-3625. - 35.
Mao L, Udaykumar HS, Karlsson JOM: Simulation of Micro-scale Interaction between Ice and Biological Cells. International Journal of Heat and Mass Transfer 2003, 46:5123-5136. - 36.
Chang A, Dantzig JA, Darr BT, Hubel A: Modeling the Interaction of Biological Cells with a Solidifying Interface. Journal of Computational Physics 2007, 226:1808-1829. - 37.
Bartels-Rausch T, Bergeron V, Cartwright JHE, Escribano R, Finney JL, Grothe H, Gutierrez PJ, Haapala J, Kuhs WF, Pettersson JBC, et al: Ice Structures, Patterns, and Processes: A View Across the Icefields. Reviews of Modern Physics 2012, 84:885-944. - 38.
Libbrecht KG: The Physics of Snow Crystals. Reports on Progress in Physics 2005, 68:855-895. - 39.
Blackford JR: Sintering and Microstructure of Ice: A Review. Journal of Physics D-Applied Physics 2007, 40:355-385. - 40.
Petzold G, Aguilera JM: Ice Morphology: Fundamentals and Technological Applications in Foods. Food Biophysics 2009, 4:378-396.