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Bioinformatics - Trends and Methodologies

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Bioinformatics
Bioinformatics Trends and Methodologies Edited by Mahmood A. Mahdavi

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Academic Editor

Mahmood A. Mahdavi
Mahmood A. Mahdavi

Published02 November 2011

Doi10.5772/786

ISBN978-953-307-282-1

eBook (PDF) ISBN978-953-51-5549-2

Copyright year2011

Number of pages738

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  • DOAB
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Table of Contents

Open access  chapters

1. Concepts, Historical Milestones and the Central Place of Bioinformatics in Modern Biology: A European Perspective

By T.K. Attwood, A. Gisel, N-E. Eriksson and E. Bongcam-Rudloff

3,850
10
2. Data Integration in Bioinformatics: Current Efforts and Challenges

By Zhang Zhang, Vladimir B. Bajic, Jun Yu, Kei-Hoi Cheung and Jeffrey P. Townsend

4,501
13
3. Semantic Data Integration on Biomedical Data Using Semantic Web Technologies

By Roland Kienast and Christian Baumgartner

2,671
2
4. Vector Space Information Retrieval Techniques for Bioinformatics Data Mining

By Eric Sakk and Iyanuoluwa E. Odebode

3,221
2
5. Massively Parallelized DNA Motif Search on FPGA

By Yasmeen Farouk, Tarek ElDeeb and Hossam Faheem

2,098
3
6. A Pattern Search Method for Discovering Conserved Motifs in Bioactive Peptide Families

By Feng Liu, Liliane Schoofs, Geert Baggerman, Geert Wets and Marleen Lindemans

2,454
2
7. Database Mining: Defining the Pathogenesis of Inflammatory and Immunological Diseases

By Fan Yang, Irene Hwa Yang, Hong Wang and Xiao-Feng Yang

1,907
8. Data Mining Pubmed Identifies Core Signalings and miRNA Regulatory Module in Glioma

By Chunsheng Kang, Junxia Zhang, Yingyi Wang, Ning Liu, Jilong Liu, Huazong Zeng, Tao Jiang, Yongping You and Peiyu Pu

1,883
2
9. Significance Score of Motifs in Biological Sequences

By Grégory Nuel

2,545
2
10. A Systematic and Thorough Search for Domains of the Scavenger Receptor Cysteine-Rich Group-B Family in the Human Genome

By Alexandre M. Carmo and Vattipally B. Sreenu

2,757
11. Assessing Multiple Sequence Alignments Using Visual Tools

By Catherine L. Anderson, Cory L. Strope and Etsuko N. Moriyama

3,210
12. Optimal Sequence Alignment and Its Relationship with Phylogeny

By Atoosa Ghahremani and Mahmood A. Mahdavi

2,561
1
13. Predicting Virus Evolution

By Tom Burr

2,195
14. A Bioinformatical Approach to Study the Endosomal Sorting Complex Required for Transport (ESCRT) Machinery in Protozoan Parasites: The Entamoeba histolytica Case

By Israel López-Reyes, Cecilia Bañuelos, Abigail Betanzos and Esther Orozco

2,460
2
15. Structural Bioinformatics Analysis of Acid Alpha-Glucosidase Mutants with Pharmacological Chaperones

By Sheau Ling Ho

3,523
1
16. Bioinformatics Domain Structure Prediction and Homology Modeling of Human Ryanodine Receptor 2

By V. Bauerová-Hlinková, J. Bauer, E. Hostinová, J. Gašperík, K. Beck, Ľ. Borko, A. Faltínová, A. Zahradníková and J. Ševčík

2,781
17. Identifying Enzyme Knockout Strategies on Multiple Enzyme Associations

By Bin Song, I. Esra Büyüktahtakın, Nirmalya Bandyopadhyay, Sanjay Ranka and Tamer Kahveci

2,299
1
18. Using Bacterial Artificial Chromosomes to Refine Genome Assemblies and to Build Virtual Genomes

By Abhirami Ratnakumar, Wesley Barris, Sean McWilliam and Brian P. Dalrymple

2,188
19. Basidiomycetes Telomeres – A Bioinformatics Approach

By Lucía Ramírez, Gúmer Pérez, Raúl Castanera, Francisco Santoyo and Antonio G. Pisabarro

2,074
2
20. SNPpattern: A Genetic Tool to Derive Haplotype Blocks and Measure Genomic Diversity in Populations Using SNP Genotypes

By Stephen J. Goodswen and Haja N. Kadarmideen

2,863
21. Algorithms for CpG Islands Search: New Advantages and Old Problems

By Yulia A. Medvedeva

2,593
1
22. Translational Oncogenomics and Human Cancer Interactomics: Advanced Techniques and Complex System Dynamic Approaches

By I. C. Baianu

2,510
23. In-silico Approaches for RNAi Post-Transcriptional Gene Regulation: Optimizing siRNA Design and Selection

By Mahmoud ElHefnawi and Mohamed Mysara

3,154
2
24. MicroRNA Targeting in Heart: A Theoretical Analysis

By Zhiguo Wang

2,472
25. Genome-Wide Identification of Estrogen Receptor Alpha Regulated miRNAs Using Transcription Factor Binding Data

By Jianzhen Xu, Xi Zhou and Chi-Wai Wong

2,209
1
26. Quantification of Gene Expression Based on Microarray Experiment

By Samane F. Farsani and Mahmood A. Mahdavi

2,548
27. On-Chip Living-Cell Microarrays for Network Biology

By Ronnie Willaert and Hichem Sahli

2,443
28. Novel Machine Learning Techniques for Micro-Array Data Classification

By Neamat El Gayar, Eman Ahmed and Iman El Azab

2,466
29. Deep Sequencing Data Analysis: Challenges and Solutions

By Ofer Isakov and Noam Shomron

4,633
3
30. Whole Genome Annotation: In Silico Analysis

By Vasco Azevedo, Vinicius Abreu, Sintia Almeida, Anderson Santos, Siomar Soares, Amjad Ali, Anne Pinto, Aryane Magalhães, Eudes Barbosa, Rommel Ramos, Louise Cerdeira, Adriana Carneiro, Paula Schneider, Artur Silva and Anderson Miyoshi

4,716
1
31. Designing of Anti-Cancer Drug Targeted to Bcl-2 Associated Athanogene (BAG1) Protein

By Amit Kumar, Kriti Verma and Amita Sinha

2,591
1

IMPACT OF THIS BOOK AND ITS CHAPTERS

86,375 Total Chapter Downloads

5,474 Total Chapter Views

53 Crossref Citations

67 Web of Science Citations

124 Dimensions Citations

3 Altmetric Score

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